RNA–Protein interactions for RNA: ENST00000554677.1

MTHFD1-207, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-207ENST00000554677 PCDH1Q08174 1060 aa11.31□□□□□ -0.6
MTHFD1-207ENST00000554677 CHIT1Q13231 466 aa11.31□□□□□ -0.6
MTHFD1-207ENST00000554677 ZKSCAN8Q15776 578 aaPredicted RBP11.31□□□□□ -0.6
MTHFD1-207ENST00000554677 PDK4Q16654 411 aa11.31□□□□□ -0.6
MTHFD1-207ENST00000554677 PIGGQ5H8A4 983 aa11.31□□□□□ -0.6
MTHFD1-207ENST00000554677 RTL6Q6ICC9 239 aa11.31□□□□□ -0.6
MTHFD1-207ENST00000554677 SPNS3Q6ZMD2 512 aa11.31□□□□□ -0.6
MTHFD1-207ENST00000554677 TRILQ7L0X0 811 aa11.31□□□□□ -0.6
MTHFD1-207ENST00000554677 ISCA2Q86U28 154 aa11.31□□□□□ -0.6
MTHFD1-207ENST00000554677 DMRTC2Q8IXT2 367 aaPredicted RBP11.31□□□□□ -0.6
MTHFD1-207ENST00000554677 TMEM251Q8N6I4 163 aa11.31□□□□□ -0.6
MTHFD1-207ENST00000554677 ACOT4Q8N9L9 421 aa11.31□□□□□ -0.6
MTHFD1-207ENST00000554677 SNX31Q8N9S9 440 aa11.31□□□□□ -0.6
MTHFD1-207ENST00000554677 OR14A16Q8NHC5 309 aa11.31□□□□□ -0.6
MTHFD1-207ENST00000554677 SLC2A12Q8TD20 617 aa11.31□□□□□ -0.6
MTHFD1-207ENST00000554677 PYROXD1Q8WU10 500 aa11.31□□□□□ -0.6
MTHFD1-207ENST00000554677 CHTF18Q8WVB6 975 aa11.31□□□□□ -0.6
MTHFD1-207ENST00000554677 KCNC2Q96PR1 638 aa11.31□□□□□ -0.6
MTHFD1-207ENST00000554677 KRT12Q99456 494 aa11.31□□□□□ -0.6
MTHFD1-207ENST00000554677 RBBP8Q99708 897 aa11.31□□□□□ -0.6
MTHFD1-207ENST00000554677 TBCDQ9BTW9 1192 aa11.31□□□□□ -0.6
MTHFD1-207ENST00000554677 EFCAB11Q9BUY7 163 aa11.31□□□□□ -0.6
MTHFD1-207ENST00000554677 CD244Q9BZW8 370 aa11.31□□□□□ -0.6
MTHFD1-207ENST00000554677 OR8D2Q9GZM6 311 aa11.31□□□□□ -0.6
MTHFD1-207ENST00000554677 CNOT10Q9H9A5 744 aaKnown RBP11.31□□□□□ -0.6
MTHFD1-207ENST00000554677 SH2D2AQ9NP31 389 aa11.31□□□□□ -0.6
MTHFD1-207ENST00000554677 SEMA4BQ9NPR2 832 aaPredicted RBP11.31□□□□□ -0.6
MTHFD1-207ENST00000554677 PNPLA3Q9NST1 481 aa11.31□□□□□ -0.6
MTHFD1-207ENST00000554677 TNFRSF10DQ9UBN6 386 aa11.31□□□□□ -0.6
MTHFD1-207ENST00000554677 SAR1BQ9Y6B6 198 aa11.31□□□□□ -0.6
MTHFD1-207ENST00000554677 EXPH5Q8NEV8 1989 aa11.3□□□□□ -0.6
MTHFD1-207ENST00000554677 TCRBV9S1A1TA0A576 114 aa11.3□□□□□ -0.6
MTHFD1-207ENST00000554677 SYNDIG1LA6NDD5 238 aa11.3□□□□□ -0.6
MTHFD1-207ENST00000554677 FAM159BA6NKW6 160 aa11.3□□□□□ -0.6
MTHFD1-207ENST00000554677 C17orf105B2RV13 164 aa11.3□□□□□ -0.6
MTHFD1-207ENST00000554677 SH3BGRLO75368 114 aa11.3□□□□□ -0.6
MTHFD1-207ENST00000554677 FAM155BO75949 473 aa11.3□□□□□ -0.6
MTHFD1-207ENST00000554677 SCELO95171 688 aa11.3□□□□□ -0.6
MTHFD1-207ENST00000554677 TGFB1P01137 390 aa11.3□□□□□ -0.6
MTHFD1-207ENST00000554677 CELA3AP09093 270 aa11.3□□□□□ -0.6
MTHFD1-207ENST00000554677 CCL3P10147 92 aa11.3□□□□□ -0.6
MTHFD1-207ENST00000554677 MSX1P28360 303 aa11.3□□□□□ -0.6
MTHFD1-207ENST00000554677 HPDP32754 393 aaPredicted RBP11.3□□□□□ -0.6
MTHFD1-207ENST00000554677 MSH2P43246 934 aa11.3□□□□□ -0.6
MTHFD1-207ENST00000554677 SLC12A2P55011 1212 aa11.3□□□□□ -0.6
MTHFD1-207ENST00000554677 RIPPLY3P57055 190 aa11.3□□□□□ -0.6
MTHFD1-207ENST00000554677 ATP6V0D1P61421 351 aa11.3□□□□□ -0.6
MTHFD1-207ENST00000554677 GNG11P61952 73 aa11.3□□□□□ -0.6
MTHFD1-207ENST00000554677 PLGLB1Q02325 96 aa11.3□□□□□ -0.6
MTHFD1-207ENST00000554677 IRF8Q02556 426 aa11.3□□□□□ -0.6
MTHFD1-207ENST00000554677 STX4Q12846 297 aa11.3□□□□□ -0.6
MTHFD1-207ENST00000554677 ILF2Q12905 390 aaKnown RBP11.3□□□□□ -0.6
MTHFD1-207ENST00000554677 LAPTM5Q13571 262 aa11.3□□□□□ -0.6
MTHFD1-207ENST00000554677 SERTAD2Q14140 314 aa11.3□□□□□ -0.6
MTHFD1-207ENST00000554677 HYAL4Q2M3T9 481 aa11.3□□□□□ -0.6
MTHFD1-207ENST00000554677 PAOXQ6QHF9 649 aa11.3□□□□□ -0.6
MTHFD1-207ENST00000554677 ADGRD1Q6QNK2 874 aa11.3□□□□□ -0.6
MTHFD1-207ENST00000554677 LYPD8Q6UX82 237 aa11.3□□□□□ -0.6
MTHFD1-207ENST00000554677 DGAT2L6Q6ZPD8 337 aa11.3□□□□□ -0.6
MTHFD1-207ENST00000554677 RTL4Q6ZR62 310 aa11.3□□□□□ -0.6
MTHFD1-207ENST00000554677 RGS9BPQ6ZS82 235 aa11.3□□□□□ -0.6
MTHFD1-207ENST00000554677 CDH24Q86UP0 819 aa11.3□□□□□ -0.6
MTHFD1-207ENST00000554677 OR4N5Q8IXE1 308 aa11.3□□□□□ -0.6
MTHFD1-207ENST00000554677 LAS2Q8IYD9 372 aa11.3□□□□□ -0.6
MTHFD1-207ENST00000554677 RNF175Q8N4F7 328 aa11.3□□□□□ -0.6
MTHFD1-207ENST00000554677 GOLM1Q8NBJ4 401 aa11.3□□□□□ -0.6
MTHFD1-207ENST00000554677 OR5M9Q8NGP3 310 aa11.3□□□□□ -0.6
MTHFD1-207ENST00000554677 TSPAN17Q96FV3 270 aa11.3□□□□□ -0.6
MTHFD1-207ENST00000554677 SENP5Q96HI0 755 aaPredicted RBP11.3□□□□□ -0.6
MTHFD1-207ENST00000554677 SGCZQ96LD1 299 aa11.3□□□□□ -0.6
MTHFD1-207ENST00000554677 CPNE1Q99829 537 aa11.3□□□□□ -0.6
MTHFD1-207ENST00000554677 FAM173AQ9BQD7 235 aa11.3□□□□□ -0.6
MTHFD1-207ENST00000554677 IL1RL2Q9HB29 575 aa11.3□□□□□ -0.6
MTHFD1-207ENST00000554677 PROK2Q9HC23 129 aa11.3□□□□□ -0.6
MTHFD1-207ENST00000554677 SAYSD1Q9NPB0 183 aa11.3□□□□□ -0.6
MTHFD1-207ENST00000554677 CD274Q9NZQ7 290 aa11.3□□□□□ -0.6
MTHFD1-207ENST00000554677 FAM215AQ9Y5M1 114 aa11.3□□□□□ -0.6
MTHFD1-207ENST00000554677 ANKHD1Q8IWZ3 2542 aaKnown RBP11.3□□□□□ -0.6
MTHFD1-207ENST00000554677 HRNRQ86YZ3 2850 aaPredicted RBP11.3□□□□□ -0.6
MTHFD1-207ENST00000554677 DOCK7Q96N67 2140 aa11.29□□□□□ -0.6
MTHFD1-207ENST00000554677 KIAA1549Q9HCM3 1950 aa11.29□□□□□ -0.6
MTHFD1-207ENST00000554677 OR14I1A6ND48 311 aa11.29□□□□□ -0.6
MTHFD1-207ENST00000554677 FAM90A27PA6NNH2 459 aa11.29□□□□□ -0.6
MTHFD1-207ENST00000554677 WASHC1A8K0Z3 465 aa11.29□□□□□ -0.6
MTHFD1-207ENST00000554677 HRKO00198 91 aa11.29□□□□□ -0.6
MTHFD1-207ENST00000554677 FGF17O60258 216 aa11.29□□□□□ -0.6
MTHFD1-207ENST00000554677 CCNT2O60583 730 aaKnown RBP11.29□□□□□ -0.6
MTHFD1-207ENST00000554677 NADKO95544 446 aaPredicted RBP11.29□□□□□ -0.6
MTHFD1-207ENST00000554677 IGKV3-11P04433 115 aa11.29□□□□□ -0.6
MTHFD1-207ENST00000554677 HOXD4P09016 255 aaPredicted RBP11.29□□□□□ -0.6
MTHFD1-207ENST00000554677 GLI4P10075 376 aa11.29□□□□□ -0.6
MTHFD1-207ENST00000554677 STMN1P16949 149 aa11.29□□□□□ -0.6
MTHFD1-207ENST00000554677 TNNI3P19429 210 aa11.29□□□□□ -0.6
MTHFD1-207ENST00000554677 HIST1H1TP22492 207 aaPredicted RBP11.29□□□□□ -0.6
MTHFD1-207ENST00000554677 GP5P40197 560 aa11.29□□□□□ -0.6
MTHFD1-207ENST00000554677 MAGEA5P43359 124 aa11.29□□□□□ -0.6
MTHFD1-207ENST00000554677 DNASE1L1P49184 302 aa11.29□□□□□ -0.6
MTHFD1-207ENST00000554677 RAB10P61026 200 aa11.29□□□□□ -0.6
MTHFD1-207ENST00000554677 RCN2Q14257 317 aa11.29□□□□□ -0.6
MTHFD1-207ENST00000554677 MPEG1Q2M385 716 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms