RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 S100A5P33763 92 aa6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 PTGER1P34995 402 aa6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 BMPR1AP36894 532 aa6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 HMGA2P52926 109 aa6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 CDC42P60953 191 aa6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 LSM11P83369 360 aaKnown RBP eCLIP6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 NOGQ13253 232 aa6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 EIF4HQ15056 248 aaKnown RBP6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 BCL2A1Q16548 175 aa6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 UAP1L1Q3KQV9 507 aa6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 ZMAT1Q5H9K5 638 aa6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 PLAG1Q6DJT9 500 aa6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 FRMPD2BQ6IN97 320 aa6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 NXPE4Q6UWF7 544 aa6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 CCBE1Q6UXH8 406 aaPredicted RBP6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 CEACAM20Q6UY09 585 aa6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 TRMT11Q7Z4G4 463 aaKnown RBP6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 C12orf40Q86WS4 652 aa6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 SLC7A5P1Q8MH63 180 aa6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 TAGAPQ8N103 731 aa6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 IQCF1Q8N6M8 205 aa6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 OR9A1PQ8NGU1 263 aa6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 SLC38A5Q8WUX1 472 aa6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 REPS1Q96D71 796 aa6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 DTD2Q96FN9 168 aa6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 OTUB1Q96FW1 271 aaPredicted RBP6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 COQ10AQ96MF6 247 aa6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 ZSWIM3Q96MP5 696 aa6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 MIEF1Q9NQG6 463 aa6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 TBC1D24Q9ULP9 559 aa6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 MAPRE3Q9UPY8 281 aa6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 UGT2A1Q9Y4X1 527 aa6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 PRAMEF27A3QJZ7 478 aa6.59□□□□□ -1.35
LINC-ROR-201ENST00000553704 ANTXRLA6NF34 631 aa6.59□□□□□ -1.35
LINC-ROR-201ENST00000553704 HIDE1A8MVS5 230 aa6.59□□□□□ -1.35
LINC-ROR-201ENST00000553704 TLR4O00206 839 aa6.59□□□□□ -1.35
LINC-ROR-201ENST00000553704 PSMD11O00231 422 aa6.59□□□□□ -1.35
LINC-ROR-201ENST00000553704 QSOX1O00391 747 aa6.59□□□□□ -1.35
LINC-ROR-201ENST00000553704 CCRL2O00421 344 aa6.59□□□□□ -1.35
LINC-ROR-201ENST00000553704 AP3D1O14617 1153 aa6.59□□□□□ -1.35
LINC-ROR-201ENST00000553704 LRRTM2O43300 516 aa6.59□□□□□ -1.35
LINC-ROR-201ENST00000553704 LINC00271P0C7V0 271 aa6.59□□□□□ -1.35
LINC-ROR-201ENST00000553704 RHCEP18577 417 aa6.59□□□□□ -1.35
LINC-ROR-201ENST00000553704 ELAVL4P26378 380 aaKnown RBP6.59□□□□□ -1.35
LINC-ROR-201ENST00000553704 PSMB5P28074 263 aa6.59□□□□□ -1.35
LINC-ROR-201ENST00000553704 PNLIPRP1P54315 467 aa6.59□□□□□ -1.35
LINC-ROR-201ENST00000553704 WDR5P61964 334 aaKnown RBP6.59□□□□□ -1.35
LINC-ROR-201ENST00000553704 ZNF45Q02386 682 aa6.59□□□□□ -1.35
LINC-ROR-201ENST00000553704 LRRC74AQ0VAA2 488 aa6.59□□□□□ -1.35
LINC-ROR-201ENST00000553704 CNTN1Q12860 1018 aa6.59□□□□□ -1.35
LINC-ROR-201ENST00000553704 HSPB3Q12988 150 aa6.59□□□□□ -1.35
LINC-ROR-201ENST00000553704 COL9A2Q14055 689 aaPredicted RBP6.59□□□□□ -1.35
LINC-ROR-201ENST00000553704 ELOAQ14241 798 aaKnown RBP6.59□□□□□ -1.35
LINC-ROR-201ENST00000553704 SF3B4Q15427 424 aaKnown RBP eCLIP6.59□□□□□ -1.35
LINC-ROR-201ENST00000553704 ZNF77Q15935 545 aa6.59□□□□□ -1.35
LINC-ROR-201ENST00000553704 ERAP2Q6P179 960 aa6.59□□□□□ -1.35
LINC-ROR-201ENST00000553704 KIAA0907Q7Z7F0 614 aaPredicted RBP6.59□□□□□ -1.35
LINC-ROR-201ENST00000553704 OR5AR1Q8NGP9 310 aa6.59□□□□□ -1.35
LINC-ROR-201ENST00000553704 CAPNS2Q96L46 248 aa6.59□□□□□ -1.35
LINC-ROR-201ENST00000553704 MAPKAP1Q9BPZ7 522 aa6.59□□□□□ -1.35
LINC-ROR-201ENST00000553704 HOXD1Q9GZZ0 328 aa6.59□□□□□ -1.35
LINC-ROR-201ENST00000553704 SLC25A19Q9HC21 320 aa6.59□□□□□ -1.35
LINC-ROR-201ENST00000553704 SMURF1Q9HCE7 757 aa6.59□□□□□ -1.35
LINC-ROR-201ENST00000553704 CCDC177Q9NQR7 707 aaPredicted RBP6.59□□□□□ -1.35
LINC-ROR-201ENST00000553704 SIRT3Q9NTG7 399 aaPredicted RBP6.59□□□□□ -1.35
LINC-ROR-201ENST00000553704 TDP1Q9NUW8 608 aa6.59□□□□□ -1.35
LINC-ROR-201ENST00000553704 CUEDC1Q9NWM3 386 aaPredicted RBP6.59□□□□□ -1.35
LINC-ROR-201ENST00000553704 EHD3Q9NZN3 535 aa6.59□□□□□ -1.35
LINC-ROR-201ENST00000553704 TSC22D4Q9Y3Q8 395 aa6.59□□□□□ -1.35
LINC-ROR-201ENST00000553704 KLK4Q9Y5K2 254 aa6.59□□□□□ -1.35
LINC-ROR-201ENST00000553704 EFCAB10A6NFE3 127 aa6.59□□□□□ -1.36
LINC-ROR-201ENST00000553704 CYP7B1O75881 506 aa6.59□□□□□ -1.36
LINC-ROR-201ENST00000553704 TP53P04637 393 aaPredicted RBP6.59□□□□□ -1.36
LINC-ROR-201ENST00000553704 SRPRAP08240 638 aaKnown RBP6.59□□□□□ -1.36
LINC-ROR-201ENST00000553704 HBQ1P09105 142 aa6.59□□□□□ -1.36
LINC-ROR-201ENST00000553704 AZGP1P25311 298 aaKnown RBP6.59□□□□□ -1.36
LINC-ROR-201ENST00000553704 RPS19P39019 145 aaKnown RBP6.59□□□□□ -1.36
LINC-ROR-201ENST00000553704 ETV6P41212 452 aa6.59□□□□□ -1.36
LINC-ROR-201ENST00000553704 ALDH9A1P49189 494 aa6.59□□□□□ -1.36
LINC-ROR-201ENST00000553704 IFITM2Q01629 132 aa6.59□□□□□ -1.36
LINC-ROR-201ENST00000553704 ZNF91Q05481 1191 aa6.59□□□□□ -1.36
LINC-ROR-201ENST00000553704 BCL7AQ4VC05 210 aa6.59□□□□□ -1.36
LINC-ROR-201ENST00000553704 PRAMEF14Q5SWL7 426 aa6.59□□□□□ -1.36
LINC-ROR-201ENST00000553704 PRAMEF13Q5VWM6 474 aa6.59□□□□□ -1.36
LINC-ROR-201ENST00000553704 NXNL2Q5VZ03 156 aa6.59□□□□□ -1.36
LINC-ROR-201ENST00000553704 SAXO2Q658L1 398 aa6.59□□□□□ -1.36
LINC-ROR-201ENST00000553704 RAET1GQ6H3X3 334 aa6.59□□□□□ -1.36
LINC-ROR-201ENST00000553704 REEP3Q6NUK4 255 aa6.59□□□□□ -1.36
LINC-ROR-201ENST00000553704 TCTN3Q6NUS6 607 aa6.59□□□□□ -1.36
LINC-ROR-201ENST00000553704 DEF8Q6ZN54 512 aa6.59□□□□□ -1.36
LINC-ROR-201ENST00000553704 ANKRD33Q7Z3H0 272 aa6.59□□□□□ -1.36
LINC-ROR-201ENST00000553704 SLC9B2Q86UD5 537 aa6.59□□□□□ -1.36
LINC-ROR-201ENST00000553704 MEX3DQ86XN8 651 aaKnown RBP6.59□□□□□ -1.36
LINC-ROR-201ENST00000553704 SFTPA1Q8IWL2 248 aa6.59□□□□□ -1.36
LINC-ROR-201ENST00000553704 LAX1Q8IWV1 398 aa6.59□□□□□ -1.36
LINC-ROR-201ENST00000553704 AMER3Q8N944 861 aa6.59□□□□□ -1.36
LINC-ROR-201ENST00000553704 SCAIQ8N9R8 606 aa6.59□□□□□ -1.36
LINC-ROR-201ENST00000553704 ANKRD53Q8N9V6 530 aa6.59□□□□□ -1.36
LINC-ROR-201ENST00000553704 FBXO15Q8NCQ5 510 aaPredicted RBP6.59□□□□□ -1.36
LINC-ROR-201ENST00000553704 C9orf43Q8TAL5 461 aaPredicted RBP6.59□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms