RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 PRM3Q9NNZ6 103 aa12.56□□□□□ -0.4
TROAP-211ENST00000549891 RYDENQ9NUL5 291 aaKnown RBP12.56□□□□□ -0.4
TROAP-211ENST00000549891 DNAJB12Q9NXW2 375 aaKnown RBP12.56□□□□□ -0.4
TROAP-211ENST00000549891 B4GALT7Q9UBV7 327 aa12.56□□□□□ -0.4
TROAP-211ENST00000549891 Q9UFV3 132 aa12.56□□□□□ -0.4
TROAP-211ENST00000549891 FAM215AQ9Y5M1 114 aa12.56□□□□□ -0.4
TROAP-211ENST00000549891 LIPGQ9Y5X9 500 aa12.56□□□□□ -0.4
TROAP-211ENST00000549891 PSAT1Q9Y617 370 aa12.56□□□□□ -0.4
TROAP-211ENST00000549891 TRGV5A0A0B4J1U4 118 aa12.55□□□□□ -0.4
TROAP-211ENST00000549891 ATP6AP2A0A1C7CYW4 349 aa12.55□□□□□ -0.4
TROAP-211ENST00000549891 DIAPH2O60879 1101 aa12.55□□□□□ -0.4
TROAP-211ENST00000549891 LDB3O75112 727 aa12.55□□□□□ -0.4
TROAP-211ENST00000549891 STK16O75716 305 aa12.55□□□□□ -0.4
TROAP-211ENST00000549891 ATP6AP2O75787 350 aa12.55□□□□□ -0.4
TROAP-211ENST00000549891 TBX6O95947 436 aaPredicted RBP12.55□□□□□ -0.4
TROAP-211ENST00000549891 IVDP26440 423 aa12.55□□□□□ -0.4
TROAP-211ENST00000549891 DNASE1L1P49184 302 aa12.55□□□□□ -0.4
TROAP-211ENST00000549891 PPP2R2AP63151 447 aa12.55□□□□□ -0.4
TROAP-211ENST00000549891 POU4F1Q01851 419 aa12.55□□□□□ -0.4
TROAP-211ENST00000549891 BIKQ13323 160 aa12.55□□□□□ -0.4
TROAP-211ENST00000549891 C18orf21Q32NC0 220 aaPredicted RBP12.55□□□□□ -0.4
TROAP-211ENST00000549891 C1orf185Q5T7R7 199 aa12.55□□□□□ -0.4
TROAP-211ENST00000549891 SLC22A10Q63ZE4 541 aa12.55□□□□□ -0.4
TROAP-211ENST00000549891 SULT1C3Q6IMI6 304 aa12.55□□□□□ -0.4
TROAP-211ENST00000549891 ARSKQ6UWY0 536 aa12.55□□□□□ -0.4
TROAP-211ENST00000549891 VN1R5Q7Z5H4 357 aa12.55□□□□□ -0.4
TROAP-211ENST00000549891 GPSM1Q86YR5 675 aa12.55□□□□□ -0.4
TROAP-211ENST00000549891 SNX31Q8N9S9 440 aa12.55□□□□□ -0.4
TROAP-211ENST00000549891 NUBPLQ8TB37 319 aa12.55□□□□□ -0.4
TROAP-211ENST00000549891 SLC22A8Q8TCC7 542 aa12.55□□□□□ -0.4
TROAP-211ENST00000549891 WDR34Q96EX3 536 aa12.55□□□□□ -0.4
TROAP-211ENST00000549891 TSPAN17Q96FV3 270 aa12.55□□□□□ -0.4
TROAP-211ENST00000549891 ART5Q96L15 291 aa12.55□□□□□ -0.4
TROAP-211ENST00000549891 RUNDC3BQ96NL0 473 aa12.55□□□□□ -0.4
TROAP-211ENST00000549891 F2RL3Q96RI0 385 aa12.55□□□□□ -0.4
TROAP-211ENST00000549891 POLDIP3Q9BY77 421 aaKnown RBP12.55□□□□□ -0.4
TROAP-211ENST00000549891 CXXC4Q9H2H0 198 aa12.55□□□□□ -0.4
TROAP-211ENST00000549891 RHOJQ9H4E5 214 aa12.55□□□□□ -0.4
TROAP-211ENST00000549891 PRDM7Q9NQW5 492 aa12.55□□□□□ -0.4
TROAP-211ENST00000549891 ZNF490Q9ULM2 529 aaPredicted RBP12.55□□□□□ -0.4
TROAP-211ENST00000549891 BOKQ9UMX3 212 aaPredicted RBP12.55□□□□□ -0.4
TROAP-211ENST00000549891 SNX12Q9UMY4 172 aa12.55□□□□□ -0.4
TROAP-211ENST00000549891 L3MBTL1Q9Y468 752 aa12.55□□□□□ -0.4
TROAP-211ENST00000549891 ATG4BQ9Y4P1 393 aa12.55□□□□□ -0.4
TROAP-211ENST00000549891 PCDHGB3Q9Y5G1 929 aa12.55□□□□□ -0.4
TROAP-211ENST00000549891 NINQ8N4C6 2090 aa12.55□□□□□ -0.4
TROAP-211ENST00000549891 FREM3P0C091 2139 aa12.55□□□□□ -0.4
TROAP-211ENST00000549891 NCKAP5O14513 1909 aa12.54□□□□□ -0.4
TROAP-211ENST00000549891 CTAG2O75638 210 aa12.54□□□□□ -0.4
TROAP-211ENST00000549891 S100BP04271 92 aaPredicted RBP12.54□□□□□ -0.4
TROAP-211ENST00000549891 CCL3P10147 92 aa12.54□□□□□ -0.4
TROAP-211ENST00000549891 FOXO1Q12778 655 aa12.54□□□□□ -0.4
TROAP-211ENST00000549891 DOC2AQ14183 400 aa12.54□□□□□ -0.4
TROAP-211ENST00000549891 PDK4Q16654 411 aa12.54□□□□□ -0.4
TROAP-211ENST00000549891 AP5B1Q2VPB7 878 aa12.54□□□□□ -0.4
TROAP-211ENST00000549891 TMEM35AQ53FP2 167 aa12.54□□□□□ -0.4
TROAP-211ENST00000549891 PIGGQ5H8A4 983 aa12.54□□□□□ -0.4
TROAP-211ENST00000549891 RIPPLY2Q5TAB7 128 aa12.54□□□□□ -0.4
TROAP-211ENST00000549891 RTL6Q6ICC9 239 aa12.54□□□□□ -0.4
TROAP-211ENST00000549891 CHSY3Q70JA7 882 aa12.54□□□□□ -0.4
TROAP-211ENST00000549891 WDR53Q7Z5U6 358 aaPredicted RBP12.54□□□□□ -0.4
TROAP-211ENST00000549891 ANKMY2Q8IV38 441 aa12.54□□□□□ -0.4
TROAP-211ENST00000549891 DND1Q8IYX4 353 aaKnown RBP12.54□□□□□ -0.4
TROAP-211ENST00000549891 SLC35F6Q8N357 371 aa12.54□□□□□ -0.4
TROAP-211ENST00000549891 SLC15A4Q8N697 577 aa12.54□□□□□ -0.4
TROAP-211ENST00000549891 ZNF321PQ8N8H1 164 aa12.54□□□□□ -0.4
TROAP-211ENST00000549891 ZNF721Q8TF20 911 aa12.54□□□□□ -0.4
TROAP-211ENST00000549891 SREK1Q8WXA9 508 aaKnown RBP12.54□□□□□ -0.4
TROAP-211ENST00000549891 UBE2E3Q969T4 207 aa12.54□□□□□ -0.4
TROAP-211ENST00000549891 POM121Q96HA1 1249 aa12.54□□□□□ -0.4
TROAP-211ENST00000549891 CAPZA3Q96KX2 299 aa12.54□□□□□ -0.4
TROAP-211ENST00000549891 DGAT2Q96PD7 388 aa12.54□□□□□ -0.4
TROAP-211ENST00000549891 KRT12Q99456 494 aa12.54□□□□□ -0.4
TROAP-211ENST00000549891 MAPKAP1Q9BPZ7 522 aa12.54□□□□□ -0.4
TROAP-211ENST00000549891 WDR83Q9BRX9 315 aaKnown RBP12.54□□□□□ -0.4
TROAP-211ENST00000549891 TMEM79Q9BSE2 394 aa12.54□□□□□ -0.4
TROAP-211ENST00000549891 TMUB1Q9BVT8 246 aa12.54□□□□□ -0.4
TROAP-211ENST00000549891 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.54□□□□□ -0.4
TROAP-211ENST00000549891 MS4A12Q9NXJ0 267 aa12.54□□□□□ -0.4
TROAP-211ENST00000549891 ALKBH4Q9NXW9 302 aa12.54□□□□□ -0.4
TROAP-211ENST00000549891 TUBA8Q9NY65 449 aaPredicted RBP12.54□□□□□ -0.4
TROAP-211ENST00000549891 MOCS1Q9NZB8 636 aa12.54□□□□□ -0.4
TROAP-211ENST00000549891 TXNDC16Q9P2K2 825 aa12.54□□□□□ -0.4
TROAP-211ENST00000549891 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.54□□□□□ -0.4
TROAP-211ENST00000549891 MAP1AP78559 2803 aaPredicted RBP12.53□□□□□ -0.4
TROAP-211ENST00000549891 PRRC2AP48634 2157 aaKnown RBP12.53□□□□□ -0.4
TROAP-211ENST00000549891 ABCA4P78363 2273 aa12.53□□□□□ -0.4
TROAP-211ENST00000549891 AKAP6Q13023 2319 aa12.53□□□□□ -0.4
TROAP-211ENST00000549891 MYOCOSA0A1B0GUC4 107 aa12.53□□□□□ -0.4
TROAP-211ENST00000549891 HSPB2A8KAH6 182 aa12.53□□□□□ -0.4
TROAP-211ENST00000549891 TAPBPO15533 448 aa12.53□□□□□ -0.4
TROAP-211ENST00000549891 CELA3AP09093 270 aa12.53□□□□□ -0.4
TROAP-211ENST00000549891 TCP1P17987 556 aaKnown RBP12.53□□□□□ -0.4
TROAP-211ENST00000549891 HIST1H1TP22492 207 aaPredicted RBP12.53□□□□□ -0.4
TROAP-211ENST00000549891 CPN2P22792 545 aa12.53□□□□□ -0.4
TROAP-211ENST00000549891 ATP5A1P25705 553 aaKnown RBP12.53□□□□□ -0.4
TROAP-211ENST00000549891 SERPINB1P30740 379 aa12.53□□□□□ -0.4
TROAP-211ENST00000549891 MSH2P43246 934 aa12.53□□□□□ -0.4
TROAP-211ENST00000549891 SSR2P43308 183 aa12.53□□□□□ -0.4
TROAP-211ENST00000549891 KIR2DL3P43628 341 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms