RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 ZC3H13Q5T200 1668 aaKnown RBP3.87□□□□□ -1.79
SCAF11-210ENST00000547654 C9orf84Q5VXU9 1444 aa3.87□□□□□ -1.79
SCAF11-210ENST00000547654 DENND4BO75064 1496 aaPredicted RBP3.86□□□□□ -1.79
SCAF11-210ENST00000547654 DNMT1P26358 1616 aaKnown RBP3.86□□□□□ -1.79
SCAF11-210ENST00000547654 A0A0G2JNG1 304 aa3.86□□□□□ -1.79
SCAF11-210ENST00000547654 TEX13DA0A0J9YY54 714 aaPredicted RBP3.86□□□□□ -1.79
SCAF11-210ENST00000547654 XKRY2A2RUG3 117 aa3.86□□□□□ -1.79
SCAF11-210ENST00000547654 LINC01553A4QN01 128 aa3.86□□□□□ -1.79
SCAF11-210ENST00000547654 H0Y8G0 127 aa3.86□□□□□ -1.79
SCAF11-210ENST00000547654 TULP2O00295 520 aa3.86□□□□□ -1.79
SCAF11-210ENST00000547654 ADAM12O43184 909 aa3.86□□□□□ -1.79
SCAF11-210ENST00000547654 SYT7O43581 403 aa3.86□□□□□ -1.79
SCAF11-210ENST00000547654 PDE9AO76083 593 aa3.86□□□□□ -1.79
SCAF11-210ENST00000547654 CGAP01215 116 aa3.86□□□□□ -1.79
SCAF11-210ENST00000547654 CA3P07451 260 aa3.86□□□□□ -1.79
SCAF11-210ENST00000547654 F3P13726 295 aa3.86□□□□□ -1.79
SCAF11-210ENST00000547654 ZNF23P17027 643 aa3.86□□□□□ -1.79
SCAF11-210ENST00000547654 CEBPBP17676 345 aa3.86□□□□□ -1.79
SCAF11-210ENST00000547654 HTR2AP28223 471 aa3.86□□□□□ -1.79
SCAF11-210ENST00000547654 ALDH4A1P30038 563 aa3.86□□□□□ -1.79
SCAF11-210ENST00000547654 HOXD3P31249 432 aaPredicted RBP3.86□□□□□ -1.79
SCAF11-210ENST00000547654 CSTF2P33240 577 aaKnown RBP eCLIP3.86□□□□□ -1.795e-9■■■■□ 25.1
SCAF11-210ENST00000547654 ADRA1AP35348 466 aa3.86□□□□□ -1.79
SCAF11-210ENST00000547654 NR2C2P49116 596 aa3.86□□□□□ -1.79
SCAF11-210ENST00000547654 THOP1P52888 689 aa3.86□□□□□ -1.79
SCAF11-210ENST00000547654 NLRP11P59045 1033 aaKnown RBP3.86□□□□□ -1.79
SCAF11-210ENST00000547654 PITX1P78337 314 aaPredicted RBP3.86□□□□□ -1.79
SCAF11-210ENST00000547654 NUCB2P80303 420 aa3.86□□□□□ -1.79
SCAF11-210ENST00000547654 TMED1Q13445 227 aa3.86□□□□□ -1.79
SCAF11-210ENST00000547654 MXD4Q14582 209 aaPredicted RBP3.86□□□□□ -1.79
SCAF11-210ENST00000547654 KIR2DS5Q14953 304 aa3.86□□□□□ -1.79
SCAF11-210ENST00000547654 OPCMLQ14982 345 aa3.86□□□□□ -1.79
SCAF11-210ENST00000547654 PDK3Q15120 406 aa3.86□□□□□ -1.79
SCAF11-210ENST00000547654 ITPRIPL2Q3MIP1 535 aa3.86□□□□□ -1.79
SCAF11-210ENST00000547654 AGKQ53H12 422 aa3.86□□□□□ -1.79
SCAF11-210ENST00000547654 SPDYCQ5MJ68 293 aa3.86□□□□□ -1.79
SCAF11-210ENST00000547654 NCR3LG1Q68D85 454 aa3.86□□□□□ -1.79
SCAF11-210ENST00000547654 HIST2H2AA3Q6FI13 130 aa3.86□□□□□ -1.79
SCAF11-210ENST00000547654 CORO6Q6QEF8 472 aa3.86□□□□□ -1.79
SCAF11-210ENST00000547654 GCNT2Q8N0V5 402 aa3.86□□□□□ -1.79
SCAF11-210ENST00000547654 KLHDC1Q8N7A1 406 aa3.86□□□□□ -1.79
SCAF11-210ENST00000547654 COLGALT1Q8NBJ5 622 aa3.86□□□□□ -1.79
SCAF11-210ENST00000547654 OR6M1Q8NGM8 313 aa3.86□□□□□ -1.79
SCAF11-210ENST00000547654 CHPT1Q8WUD6 406 aa3.86□□□□□ -1.79
SCAF11-210ENST00000547654 METTL21AQ8WXB1 218 aa3.86□□□□□ -1.79
SCAF11-210ENST00000547654 RLN3Q8WXF3 142 aa3.86□□□□□ -1.79
SCAF11-210ENST00000547654 TANKQ92844 425 aa3.86□□□□□ -1.79
SCAF11-210ENST00000547654 CASP10Q92851 521 aa3.86□□□□□ -1.79
SCAF11-210ENST00000547654 ABTB1Q969K4 478 aaPredicted RBP3.86□□□□□ -1.79
SCAF11-210ENST00000547654 NCLNQ969V3 563 aa3.86□□□□□ -1.79
SCAF11-210ENST00000547654 RAB39BQ96DA2 213 aa3.86□□□□□ -1.79
SCAF11-210ENST00000547654 NSL1Q96IY1 281 aa3.86□□□□□ -1.79
SCAF11-210ENST00000547654 RBM41Q96IZ5 413 aaKnown RBP3.86□□□□□ -1.79
SCAF11-210ENST00000547654 BTBD9Q96Q07 612 aa3.86□□□□□ -1.79
SCAF11-210ENST00000547654 SECISBP2Q96T21 854 aaKnown RBP3.86□□□□□ -1.79
SCAF11-210ENST00000547654 CBWD1Q9BRT8 395 aa3.86□□□□□ -1.79
SCAF11-210ENST00000547654 SLC25A33Q9BSK2 321 aa3.86□□□□□ -1.79
SCAF11-210ENST00000547654 ALG12Q9BV10 488 aa3.86□□□□□ -1.79
SCAF11-210ENST00000547654 EDEM2Q9BV94 578 aa3.86□□□□□ -1.79
SCAF11-210ENST00000547654 FUNDC2Q9BWH2 189 aa3.86□□□□□ -1.79
SCAF11-210ENST00000547654 MTIF3Q9H2K0 278 aaKnown RBP3.86□□□□□ -1.79
SCAF11-210ENST00000547654 RNF186Q9NXI6 227 aa3.86□□□□□ -1.79
SCAF11-210ENST00000547654 RDH8Q9NYR8 311 aa3.86□□□□□ -1.79
SCAF11-210ENST00000547654 BAIAP2L1Q9UHR4 511 aa3.86□□□□□ -1.79
SCAF11-210ENST00000547654 SIX4Q9UIU6 781 aa3.86□□□□□ -1.79
SCAF11-210ENST00000547654 OR2W1Q9Y3N9 320 aa3.86□□□□□ -1.79
SCAF11-210ENST00000547654 IQGAP1P46940 1657 aa3.86□□□□□ -1.79
SCAF11-210ENST00000547654 SF3B1O75533 1304 aaKnown RBP eCLIP3.86□□□□□ -1.79
SCAF11-210ENST00000547654 NWD1Q149M9 1564 aa3.85□□□□□ -1.79
SCAF11-210ENST00000547654 DIP2CQ9Y2E4 1556 aa3.85□□□□□ -1.79
SCAF11-210ENST00000547654 ABCA6Q8N139 1617 aa3.85□□□□□ -1.79
SCAF11-210ENST00000547654 ANTXRLA6NF34 631 aa3.85□□□□□ -1.79
SCAF11-210ENST00000547654 PDXKO00764 312 aa3.85□□□□□ -1.79
SCAF11-210ENST00000547654 APOHP02749 345 aaPredicted RBP3.85□□□□□ -1.79
SCAF11-210ENST00000547654 PRSS2P07478 247 aa3.85□□□□□ -1.79
SCAF11-210ENST00000547654 YES1P07947 543 aa3.85□□□□□ -1.79
SCAF11-210ENST00000547654 HIST1H2AGP0C0S8 130 aaPredicted RBP3.85□□□□□ -1.79
SCAF11-210ENST00000547654 CT45A8P0DMV1 189 aa3.85□□□□□ -1.79
SCAF11-210ENST00000547654 CT45A9P0DMV2 189 aa3.85□□□□□ -1.79
SCAF11-210ENST00000547654 GM2AP17900 193 aa3.85□□□□□ -1.79
SCAF11-210ENST00000547654 PPP2R1AP30153 589 aa3.85□□□□□ -1.79
SCAF11-210ENST00000547654 CASQ1P31415 396 aa3.85□□□□□ -1.79
SCAF11-210ENST00000547654 FCGR2BP31994 310 aaPredicted RBP3.85□□□□□ -1.79
SCAF11-210ENST00000547654 SLC1A3P43003 542 aa3.85□□□□□ -1.79
SCAF11-210ENST00000547654 SLC6A8P48029 635 aa3.85□□□□□ -1.79
SCAF11-210ENST00000547654 CLCN4P51793 760 aa3.85□□□□□ -1.79
SCAF11-210ENST00000547654 ATP5IP56385 69 aaPredicted RBP3.85□□□□□ -1.79
SCAF11-210ENST00000547654 UBE2HP62256 183 aa3.85□□□□□ -1.79
SCAF11-210ENST00000547654 TNFRSF17Q02223 184 aa3.85□□□□□ -1.79
SCAF11-210ENST00000547654 GBE1Q04446 702 aa3.85□□□□□ -1.79
SCAF11-210ENST00000547654 TAF10Q12962 218 aa3.85□□□□□ -1.79
SCAF11-210ENST00000547654 GTF2H2Q13888 395 aa3.85□□□□□ -1.79
SCAF11-210ENST00000547654 TMEM132DQ14C87 1099 aa3.85□□□□□ -1.79
SCAF11-210ENST00000547654 HEPACAMQ14CZ8 416 aa3.85□□□□□ -1.79
SCAF11-210ENST00000547654 POM121L1PQ3SYA9 428 aa3.85□□□□□ -1.79
SCAF11-210ENST00000547654 CT45A2Q5DJT8 189 aa3.85□□□□□ -1.79
SCAF11-210ENST00000547654 FAM76BQ5HYJ3 339 aa3.85□□□□□ -1.79
SCAF11-210ENST00000547654 SLC35D3Q5M8T2 416 aa3.85□□□□□ -1.79
SCAF11-210ENST00000547654 STXBP5Q5T5C0 1151 aa3.85□□□□□ -1.79
SCAF11-210ENST00000547654 SNRNP48Q6IEG0 339 aaKnown RBP3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms