RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 PDSS2Q86YH6 399 aa5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 SCUBE1Q8IWY4 988 aa5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 CENPLQ8N0S6 344 aaPredicted RBP5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 TAGAPQ8N103 731 aa5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 RIBC1Q8N443 379 aaPredicted RBP5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 SLC15A4Q8N697 577 aa5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 PTGR2Q8N8N7 351 aaPredicted RBP5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 ACOT4Q8N9L9 421 aa5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 CCDC63Q8NA47 563 aa5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 OR5T3Q8NGG3 340 aa5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 HUS1BQ8NHY5 278 aa5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 RDH11Q8TC12 318 aa5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 SLC22A8Q8TCC7 542 aa5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 SSC4DQ8WTU2 575 aa5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 DCAKDQ8WVC6 231 aa5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 SELENOMQ8WWX9 145 aa5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 ASB15Q8WXK1 588 aa5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 MOCOSQ96EN8 888 aa5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 MAGED4Q96JG8 741 aa5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 PKNOX2Q96KN3 472 aa5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 SGCZQ96LD1 299 aa5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 F2RL3Q96RI0 385 aa5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 MTERF1Q99551 399 aaKnown RBP5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 ERVK-6Q9BXR3 956 aa5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 MS4A8Q9BY19 250 aa5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 ALOXE3Q9BYJ1 711 aa5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 ROPN1BQ9BZX4 212 aaPredicted RBP5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 CDCP1Q9H5V8 836 aa5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 RPF2Q9H7B2 306 aaKnown RBP5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 ROPN1Q9HAT0 212 aaPredicted RBP5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 EML4Q9HC35 981 aaKnown RBP5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 HHATLQ9HCP6 504 aa5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 LANCL2Q9NS86 450 aa5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 HPF1Q9NWY4 346 aa5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 SENP1Q9P0U3 644 aa5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 LRFN1Q9P244 771 aa5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 XPR1Q9UBH6 696 aa5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 VTI1BQ9UEU0 232 aa5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 ZNF490Q9ULM2 529 aaPredicted RBP5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 SH2B3Q9UQQ2 575 aa5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 WBP11Q9Y2W2 641 aaKnown RBP5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 APCP25054 2843 aa5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 IGKV3D-11A0A0A0MRZ8 115 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 TRBV11-1A0A0K0K1C0 115 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 OR6C76A6NM76 312 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 C17orf105B2RV13 164 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 TCP11X1B4DZS4 312 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 K7EM74 188 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 E2F3O00716 465 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 TP53I11O14683 189 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 FFAR3O14843 346 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 GPR42O15529 346 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 ERLIN1O75477 346 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 JRKO75564 520 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 GPR75O95800 540 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 P04436 131 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 FAM58BPP0C7Q3 252 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 MYZAPP0CAP1 466 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 ESRRAP11474 423 aaPredicted RBP5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 MTHFD2P13995 350 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 ALOX15P16050 662 aaPredicted RBP5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 IMPDH1P20839 514 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 MAOAP21397 527 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 SERPINB3P29508 390 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 HNRNPH1P31943 449 aaKnown RBP5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 TRHRP34981 398 aaPredicted RBP5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 GCKP35557 465 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 MAGEA12P43365 314 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 HLCSP50747 726 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 SMSP52788 366 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 PGGT1BP53609 377 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 MAPK12P53778 367 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 PRKAA2P54646 552 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 OLR1P78380 273 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 BTG2P78543 158 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 IRF9Q00978 393 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 ALDH6A1Q02252 535 aaKnown RBP5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 HYAL2Q12891 473 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 DLG1Q12959 904 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 CSTF3Q12996 717 aaKnown RBP5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 LCP2Q13094 533 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 TUBA3CQ13748 450 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 NR6A1Q15406 480 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 SF3B4Q15427 424 aaKnown RBP eCLIP5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 ZRSR2Q15696 482 aaKnown RBP5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 MAPKAPK3Q16644 382 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 IMPG1Q17R60 797 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 SPIN4Q56A73 249 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 TECRLQ5HYJ1 363 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 ZNF787Q6DD87 383 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 OR52E8Q6IFG1 317 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 SLC25A25Q6KCM7 469 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 TUBA3EQ6PEY2 450 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 GFRALQ6UXV0 394 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 GK5Q6ZS86 529 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 LANCL3Q6ZV70 420 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 CUZD1Q86UP6 607 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 TDRPQ86YL5 185 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 ST13P4Q8IZP2 240 aaPredicted RBP5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 SLC34A3Q8N130 599 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms