RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 TSPYL5Q86VY4 417 aaPredicted RBP12.59□□□□□ -0.39
TNC-212ENST00000542877 UBR1Q8IWV7 1749 aa12.59□□□□□ -0.39
TNC-212ENST00000542877 HS3ST5Q8IZT8 346 aa12.59□□□□□ -0.39
TNC-212ENST00000542877 OR4K17Q8NGC6 315 aa12.59□□□□□ -0.39
TNC-212ENST00000542877 ITPKCQ96DU7 683 aa12.59□□□□□ -0.39
TNC-212ENST00000542877 GAS2L1Q99501 681 aaPredicted RBP12.59□□□□□ -0.39
TNC-212ENST00000542877 TMEM246Q9BRR3 403 aa12.59□□□□□ -0.39
TNC-212ENST00000542877 POLDIP3Q9BY77 421 aaKnown RBP12.59□□□□□ -0.39
TNC-212ENST00000542877 H7BY64 318 aa12.59□□□□□ -0.39
TNC-212ENST00000542877 B4GALT2O60909 372 aa12.59□□□□□ -0.39
TNC-212ENST00000542877 EDNRBP24530 442 aa12.59□□□□□ -0.39
TNC-212ENST00000542877 MLLT10P55197 1068 aa12.59□□□□□ -0.39
TNC-212ENST00000542877 JAG1P78504 1218 aa12.59□□□□□ -0.39
TNC-212ENST00000542877 MEF2AQ02078 507 aaPredicted RBP12.59□□□□□ -0.39
TNC-212ENST00000542877 POU4F2Q12837 409 aa12.59□□□□□ -0.39
TNC-212ENST00000542877 ZNF267Q14586 743 aaPredicted RBP12.59□□□□□ -0.39
TNC-212ENST00000542877 CEACAM19Q7Z692 300 aa12.59□□□□□ -0.39
TNC-212ENST00000542877 HSPA12BQ96MM6 686 aa12.59□□□□□ -0.39
TNC-212ENST00000542877 PRAP1Q96NZ9 151 aa12.59□□□□□ -0.39
TNC-212ENST00000542877 CERS4Q9HA82 394 aa12.59□□□□□ -0.39
TNC-212ENST00000542877 WNT6Q9Y6F9 365 aa12.59□□□□□ -0.39
TNC-212ENST00000542877 SH3D21A4FU49 640 aa12.59□□□□□ -0.39
TNC-212ENST00000542877 RFPL2O75678 378 aa12.59□□□□□ -0.39
TNC-212ENST00000542877 OR2B3O76000 313 aa12.59□□□□□ -0.39
TNC-212ENST00000542877 EFR3AQ14156 821 aa12.59□□□□□ -0.39
TNC-212ENST00000542877 UPP1Q16831 310 aa12.59□□□□□ -0.39
TNC-212ENST00000542877 KCTD18Q6PI47 426 aaPredicted RBP12.59□□□□□ -0.39
TNC-212ENST00000542877 SUN3Q8TAQ9 357 aa12.59□□□□□ -0.39
TNC-212ENST00000542877 ARMC1Q9NVT9 282 aa12.59□□□□□ -0.39
TNC-212ENST00000542877 KLRF1Q9NZS2 232 aa12.59□□□□□ -0.39
TNC-212ENST00000542877 PEAK1Q9H792 1746 aa12.59□□□□□ -0.39
TNC-212ENST00000542877 PARP4Q9UKK3 1724 aaKnown RBP12.59□□□□□ -0.39
TNC-212ENST00000542877 EMC8O43402 210 aa12.59□□□□□ -0.39
TNC-212ENST00000542877 GSRP00390 522 aa12.59□□□□□ -0.39
TNC-212ENST00000542877 S1PR1P21453 382 aa12.59□□□□□ -0.39
TNC-212ENST00000542877 DNASE1P24855 282 aa12.59□□□□□ -0.39
TNC-212ENST00000542877 GDI1P31150 447 aa12.59□□□□□ -0.39
TNC-212ENST00000542877 CTBP2P56545 445 aa12.59□□□□□ -0.39
TNC-212ENST00000542877 CES4AQ5XG92 561 aa12.59□□□□□ -0.39
TNC-212ENST00000542877 LRRN1Q6UXK5 716 aa12.59□□□□□ -0.39
TNC-212ENST00000542877 SLC9B2Q86UD5 537 aa12.59□□□□□ -0.39
TNC-212ENST00000542877 POGLUT1Q8NBL1 392 aa12.59□□□□□ -0.39
TNC-212ENST00000542877 CASTOR1Q8WTX7 329 aa12.59□□□□□ -0.39
TNC-212ENST00000542877 PCYT2Q99447 389 aa12.59□□□□□ -0.39
TNC-212ENST00000542877 CMKLR1Q99788 373 aa12.59□□□□□ -0.39
TNC-212ENST00000542877 XKR8Q9H6D3 395 aa12.59□□□□□ -0.39
TNC-212ENST00000542877 INSL6Q9Y581 213 aa12.59□□□□□ -0.39
TNC-212ENST00000542877 PTGDR2Q9Y5Y4 395 aa12.59□□□□□ -0.39
TNC-212ENST00000542877 GLOD5A6NK44 160 aa12.58□□□□□ -0.39
TNC-212ENST00000542877 GRXCR1A8MXD5 290 aa12.58□□□□□ -0.39
TNC-212ENST00000542877 KHNYNO15037 678 aaKnown RBP12.58□□□□□ -0.39
TNC-212ENST00000542877 BEST1O76090 585 aa12.58□□□□□ -0.39
TNC-212ENST00000542877 MRPL3P09001 348 aaKnown RBP12.58□□□□□ -0.39
TNC-212ENST00000542877 PORP16435 677 aaPredicted RBP12.58□□□□□ -0.39
TNC-212ENST00000542877 FLYWCH1Q4VC44 716 aa12.58□□□□□ -0.39
TNC-212ENST00000542877 ALG10Q5BKT4 473 aa12.58□□□□□ -0.39
TNC-212ENST00000542877 C22orf42Q6IC83 251 aa12.58□□□□□ -0.39
TNC-212ENST00000542877 PRSS48Q7RTY5 328 aa12.58□□□□□ -0.39
TNC-212ENST00000542877 CCDC116Q8IYX3 515 aa12.58□□□□□ -0.39
TNC-212ENST00000542877 NLGN2Q8NFZ4 835 aa12.58□□□□□ -0.39
TNC-212ENST00000542877 OR6N2Q8NGY6 317 aa12.58□□□□□ -0.39
TNC-212ENST00000542877 GLYATL1Q969I3 302 aa12.58□□□□□ -0.39
TNC-212ENST00000542877 LRIG1Q96JA1 1093 aa12.58□□□□□ -0.39
TNC-212ENST00000542877 ANKRD60Q9BZ19 345 aa12.58□□□□□ -0.39
TNC-212ENST00000542877 MCCC2Q9HCC0 563 aa12.58□□□□□ -0.39
TNC-212ENST00000542877 ALKBH4Q9NXW9 302 aa12.58□□□□□ -0.39
TNC-212ENST00000542877 PCDH17O14917 1159 aa12.58□□□□□ -0.4
TNC-212ENST00000542877 PPM1BO75688 479 aa12.58□□□□□ -0.4
TNC-212ENST00000542877 TSTD1Q8NFU3 115 aa12.58□□□□□ -0.4
TNC-212ENST00000542877 NPLOC4Q8TAT6 608 aa12.58□□□□□ -0.4
TNC-212ENST00000542877 SCRN2Q96FV2 425 aa12.58□□□□□ -0.4
TNC-212ENST00000542877 TXNRD2Q9NNW7 524 aa12.58□□□□□ -0.4
TNC-212ENST00000542877 TMEM45AQ9NWC5 275 aa12.58□□□□□ -0.4
TNC-212ENST00000542877 LMO7Q8WWI1 1683 aa12.58□□□□□ -0.4
TNC-212ENST00000542877 C9J4A7 227 aa12.58□□□□□ -0.4
TNC-212ENST00000542877 OAZ2O95190 189 aa12.58□□□□□ -0.4
TNC-212ENST00000542877 FHP07954 510 aa12.58□□□□□ -0.4
TNC-212ENST00000542877 H2AFB2P0C5Z0 115 aa12.58□□□□□ -0.4
TNC-212ENST00000542877 AFF1P51825 1210 aaKnown RBP12.58□□□□□ -0.4
TNC-212ENST00000542877 PITX1P78337 314 aaPredicted RBP12.58□□□□□ -0.4
TNC-212ENST00000542877 FAM214AQ32MH5 1076 aa12.58□□□□□ -0.4
TNC-212ENST00000542877 ZNF805Q5CZA5 627 aa12.58□□□□□ -0.4
TNC-212ENST00000542877 TMEM69Q5SWH9 247 aa12.58□□□□□ -0.4
TNC-212ENST00000542877 SPATC1Q76KD6 591 aa12.58□□□□□ -0.4
TNC-212ENST00000542877 UBQLNLQ8IYU4 475 aa12.58□□□□□ -0.4
TNC-212ENST00000542877 OR6N1Q8NGY5 312 aa12.58□□□□□ -0.4
TNC-212ENST00000542877 OR56A3Q8NH54 315 aa12.58□□□□□ -0.4
TNC-212ENST00000542877 HMGB4Q8WW32 186 aa12.58□□□□□ -0.4
TNC-212ENST00000542877 OTUB2Q96DC9 234 aa12.58□□□□□ -0.4
TNC-212ENST00000542877 NELL2Q99435 816 aa12.58□□□□□ -0.4
TNC-212ENST00000542877 G6PC3Q9BUM1 346 aa12.58□□□□□ -0.4
TNC-212ENST00000542877 FOLH1BQ9HBA9 442 aa12.58□□□□□ -0.4
TNC-212ENST00000542877 MYNNQ9NPC7 610 aa12.58□□□□□ -0.4
TNC-212ENST00000542877 MARCH4Q9P2E8 410 aaPredicted RBP12.58□□□□□ -0.4
TNC-212ENST00000542877 SARDHQ9UL12 918 aa12.58□□□□□ -0.4
TNC-212ENST00000542877 COL1A1P02452 1464 aaPredicted RBP12.58□□□□□ -0.4
TNC-212ENST00000542877 KDM4FA0A1W2PPD8 638 aa12.58□□□□□ -0.4
TNC-212ENST00000542877 PLD2O14939 933 aa12.58□□□□□ -0.4
TNC-212ENST00000542877 COCHO43405 550 aa12.58□□□□□ -0.4
TNC-212ENST00000542877 TSPAN6O43657 245 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms