RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 ZFP69BQ9UJL9 534 aa9.04□□□□□ -0.96
CHFR-220ENST00000541817 GRID1Q9ULK0 1009 aa9.04□□□□□ -0.96
CHFR-220ENST00000541817 EIF3LQ9Y262 564 aaKnown RBP9.04□□□□□ -0.96
CHFR-220ENST00000541817 MTO1Q9Y2Z2 717 aaKnown RBP9.04□□□□□ -0.96
CHFR-220ENST00000541817 ABCA1O95477 2261 aa9.03□□□□□ -0.96
CHFR-220ENST00000541817 A0A1W2PPV9 198 aa9.03□□□□□ -0.96
CHFR-220ENST00000541817 SH3D21A4FU49 640 aa9.03□□□□□ -0.96
CHFR-220ENST00000541817 SDR42E2A6NKP2 422 aa9.03□□□□□ -0.96
CHFR-220ENST00000541817 ACOT7O00154 380 aa9.03□□□□□ -0.96
CHFR-220ENST00000541817 AQP7O14520 342 aa9.03□□□□□ -0.96
CHFR-220ENST00000541817 FCHO1O14526 889 aa9.03□□□□□ -0.96
CHFR-220ENST00000541817 CD5LO43866 347 aa9.03□□□□□ -0.96
CHFR-220ENST00000541817 TGDSO95455 350 aa9.03□□□□□ -0.96
CHFR-220ENST00000541817 EPOP01588 193 aa9.03□□□□□ -0.96
CHFR-220ENST00000541817 IGHG3P01860 377 aa9.03□□□□□ -0.96
CHFR-220ENST00000541817 DHRS4L1P0CG22 281 aa9.03□□□□□ -0.96
CHFR-220ENST00000541817 IL1RNP18510 177 aa9.03□□□□□ -0.96
CHFR-220ENST00000541817 ENDOUP21128 410 aaKnown RBP9.03□□□□□ -0.96
CHFR-220ENST00000541817 AVPR1BP47901 424 aa9.03□□□□□ -0.96
CHFR-220ENST00000541817 RHAGQ02094 409 aa9.03□□□□□ -0.96
CHFR-220ENST00000541817 MGAT5Q09328 741 aa9.03□□□□□ -0.96
CHFR-220ENST00000541817 HSPA14Q0VDF9 509 aa9.03□□□□□ -0.96
CHFR-220ENST00000541817 TSTA3Q13630 321 aaPredicted RBP9.03□□□□□ -0.96
CHFR-220ENST00000541817 PARP6Q2NL67 630 aa9.03□□□□□ -0.96
CHFR-220ENST00000541817 BHLHB9Q6PI77 547 aa9.03□□□□□ -0.96
CHFR-220ENST00000541817 CYS1Q717R9 158 aa9.03□□□□□ -0.96
CHFR-220ENST00000541817 PID1Q7Z2X4 250 aa9.03□□□□□ -0.96
CHFR-220ENST00000541817 TMEM156Q8N614 296 aa9.03□□□□□ -0.96
CHFR-220ENST00000541817 RAB3IL1Q8TBN0 382 aa9.03□□□□□ -0.96
CHFR-220ENST00000541817 HEXDCQ8WVB3 486 aa9.03□□□□□ -0.96
CHFR-220ENST00000541817 ERP27Q96DN0 273 aa9.03□□□□□ -0.96
CHFR-220ENST00000541817 PEX11GQ96HA9 241 aa9.03□□□□□ -0.96
CHFR-220ENST00000541817 DNAJC1Q96KC8 554 aaKnown RBP9.03□□□□□ -0.96
CHFR-220ENST00000541817 FAM111AQ96PZ2 611 aa9.03□□□□□ -0.96
CHFR-220ENST00000541817 FSD1LQ9BXM9 530 aa9.03□□□□□ -0.96
CHFR-220ENST00000541817 GSX2Q9BZM3 304 aa9.03□□□□□ -0.96
CHFR-220ENST00000541817 NPHS2Q9NP85 383 aa9.03□□□□□ -0.96
CHFR-220ENST00000541817 SLCO1B3Q9NPD5 702 aa9.03□□□□□ -0.96
CHFR-220ENST00000541817 MKS1Q9NXB0 559 aa9.03□□□□□ -0.96
CHFR-220ENST00000541817 TSR3Q9UJK0 312 aaKnown RBP9.03□□□□□ -0.96
CHFR-220ENST00000541817 FOXD3Q9UJU5 478 aaPredicted RBP9.03□□□□□ -0.96
CHFR-220ENST00000541817 CDC42EP3Q9UKI2 254 aa9.03□□□□□ -0.96
CHFR-220ENST00000541817 RUVBL2Q9Y230 463 aaKnown RBP9.03□□□□□ -0.96
CHFR-220ENST00000541817 DYSFO75923 2080 aa9.03□□□□□ -0.96
CHFR-220ENST00000541817 TRBV5-4A0A0C4DH59 114 aa9.02□□□□□ -0.97
CHFR-220ENST00000541817 A0A1B0GVC2 190 aa9.02□□□□□ -0.97
CHFR-220ENST00000541817 OR51F1A6NGY5 319 aa9.02□□□□□ -0.97
CHFR-220ENST00000541817 ZNF860A6NHJ4 632 aa9.02□□□□□ -0.97
CHFR-220ENST00000541817 FAM159BA6NKW6 160 aa9.02□□□□□ -0.97
CHFR-220ENST00000541817 A8MV72 311 aaPredicted RBP9.02□□□□□ -0.97
CHFR-220ENST00000541817 KLF11O14901 512 aa9.02□□□□□ -0.97
CHFR-220ENST00000541817 CASKO14936 926 aa9.02□□□□□ -0.97
CHFR-220ENST00000541817 PSMD3O43242 534 aa9.02□□□□□ -0.97
CHFR-220ENST00000541817 TLX2O43763 284 aaPredicted RBP9.02□□□□□ -0.97
CHFR-220ENST00000541817 ITGA10O75578 1167 aa9.02□□□□□ -0.97
CHFR-220ENST00000541817 SOX30O94993 753 aa9.02□□□□□ -0.97
CHFR-220ENST00000541817 TPH1P17752 444 aa9.02□□□□□ -0.97
CHFR-220ENST00000541817 CCND1P24385 295 aa9.02□□□□□ -0.97
CHFR-220ENST00000541817 CCR7P32248 378 aa9.02□□□□□ -0.97
CHFR-220ENST00000541817 CCNFP41002 786 aa9.02□□□□□ -0.97
CHFR-220ENST00000541817 MAGEA3P43357 314 aa9.02□□□□□ -0.97
CHFR-220ENST00000541817 SERPINB4P48594 390 aa9.02□□□□□ -0.97
CHFR-220ENST00000541817 ZNF140P52738 457 aaPredicted RBP9.02□□□□□ -0.97
CHFR-220ENST00000541817 EMP3P54852 163 aa9.02□□□□□ -0.97
CHFR-220ENST00000541817 KCNJ2P63252 427 aa9.02□□□□□ -0.97
CHFR-220ENST00000541817 WASHC5Q12768 1159 aa9.02□□□□□ -0.97
CHFR-220ENST00000541817 VEZF1Q14119 521 aa9.02□□□□□ -0.97
CHFR-220ENST00000541817 ZNF750Q32MQ0 723 aa9.02□□□□□ -0.97
CHFR-220ENST00000541817 STEAP4Q687X5 459 aa9.02□□□□□ -0.97
CHFR-220ENST00000541817 CASC4Q6P4E1 433 aa9.02□□□□□ -0.97
CHFR-220ENST00000541817 SUSD1Q6UWL2 747 aa9.02□□□□□ -0.97
CHFR-220ENST00000541817 IL20RBQ6UXL0 311 aa9.02□□□□□ -0.97
CHFR-220ENST00000541817 TIFABQ6ZNK6 161 aa9.02□□□□□ -0.97
CHFR-220ENST00000541817 ASRGL1Q7L266 308 aa9.02□□□□□ -0.97
CHFR-220ENST00000541817 SLC22A16Q86VW1 577 aa9.02□□□□□ -0.97
CHFR-220ENST00000541817 DCUN1D3Q8IWE4 304 aa9.02□□□□□ -0.97
CHFR-220ENST00000541817 PSD4Q8NDX1 1056 aa9.02□□□□□ -0.97
CHFR-220ENST00000541817 LKAAEAR1Q8TD35 194 aa9.02□□□□□ -0.97
CHFR-220ENST00000541817 ACMSDQ8TDX5 336 aa9.02□□□□□ -0.97
CHFR-220ENST00000541817 SMPDL3BQ92485 455 aa9.02□□□□□ -0.97
CHFR-220ENST00000541817 SARAFQ96BY9 339 aa9.02□□□□□ -0.97
CHFR-220ENST00000541817 PIK3IP1Q96FE7 263 aa9.02□□□□□ -0.97
CHFR-220ENST00000541817 OLFM3Q96PB7 478 aa9.02□□□□□ -0.97
CHFR-220ENST00000541817 TMEM237Q96Q45 408 aa9.02□□□□□ -0.97
CHFR-220ENST00000541817 DEFB126Q9BYW3 111 aa9.02□□□□□ -0.97
CHFR-220ENST00000541817 TIMMDC1Q9NPL8 285 aa9.02□□□□□ -0.97
CHFR-220ENST00000541817 SEMA4BQ9NPR2 832 aaPredicted RBP9.02□□□□□ -0.97
CHFR-220ENST00000541817 KLHL8Q9P2G9 620 aaPredicted RBP9.02□□□□□ -0.97
CHFR-220ENST00000541817 FBXW2Q9UKT8 454 aa9.02□□□□□ -0.97
CHFR-220ENST00000541817 ERVK-11Q9UQG0 969 aa9.02□□□□□ -0.97
CHFR-220ENST00000541817 STK38LQ9Y2H1 464 aa9.02□□□□□ -0.97
CHFR-220ENST00000541817 USF3Q68DE3 2245 aa9.02□□□□□ -0.97
CHFR-220ENST00000541817 HEATR5BQ9P2D3 2071 aa9.01□□□□□ -0.97
CHFR-220ENST00000541817 TRGV5A0A0B4J1U4 118 aa9.01□□□□□ -0.97
CHFR-220ENST00000541817 IGKV1-8A0A0C4DH67 115 aa9.01□□□□□ -0.97
CHFR-220ENST00000541817 TRBV11-1A0A0K0K1C0 115 aa9.01□□□□□ -0.97
CHFR-220ENST00000541817 IQCF5A8MTL0 148 aa9.01□□□□□ -0.97
CHFR-220ENST00000541817 CXorf49A8MYA2 514 aaPredicted RBP9.01□□□□□ -0.97
CHFR-220ENST00000541817 FAM47E-STBD1D6RA91 191 aa9.01□□□□□ -0.97
CHFR-220ENST00000541817 BIRC5O15392 142 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms