RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 SAGE2PA6NJ88 616 aa4.25□□□□□ -1.73
SNHG1-214ENST00000540865 P2RX6O15547 441 aa4.25□□□□□ -1.73
SNHG1-214ENST00000540865 TLX2O43763 284 aaPredicted RBP4.25□□□□□ -1.73
SNHG1-214ENST00000540865 KIF5CO60282 957 aa4.25□□□□□ -1.73
SNHG1-214ENST00000540865 OR1I1O60431 355 aa4.25□□□□□ -1.73
SNHG1-214ENST00000540865 CST8O60676 142 aa4.25□□□□□ -1.73
SNHG1-214ENST00000540865 ITGA10O75578 1167 aa4.25□□□□□ -1.73
SNHG1-214ENST00000540865 ERGP11308 486 aa4.25□□□□□ -1.73
SNHG1-214ENST00000540865 PECAM1P16284 738 aaPredicted RBP4.25□□□□□ -1.73
SNHG1-214ENST00000540865 TPH1P17752 444 aa4.25□□□□□ -1.73
SNHG1-214ENST00000540865 FPR1P21462 350 aa4.25□□□□□ -1.73
SNHG1-214ENST00000540865 MSNP26038 577 aaKnown RBP4.25□□□□□ -1.73
SNHG1-214ENST00000540865 AOAHP28039 575 aa4.25□□□□□ -1.73
SNHG1-214ENST00000540865 CEACAM8P31997 349 aaPredicted RBP4.25□□□□□ -1.73
SNHG1-214ENST00000540865 FOXN2P32314 431 aa4.25□□□□□ -1.73
SNHG1-214ENST00000540865 RPA3P35244 121 aaPredicted RBP4.25□□□□□ -1.73
SNHG1-214ENST00000540865 TIMP3P35625 211 aa4.25□□□□□ -1.73
SNHG1-214ENST00000540865 HSD17B2P37059 387 aa4.25□□□□□ -1.73
SNHG1-214ENST00000540865 MAN2A2P49641 1150 aa4.25□□□□□ -1.73
SNHG1-214ENST00000540865 ABATP80404 500 aa4.25□□□□□ -1.73
SNHG1-214ENST00000540865 PRDX1Q06830 199 aaKnown RBP4.25□□□□□ -1.73
SNHG1-214ENST00000540865 KRTAP1-1Q07627 177 aa4.25□□□□□ -1.73
SNHG1-214ENST00000540865 TRIM14Q14142 442 aa4.25□□□□□ -1.73
SNHG1-214ENST00000540865 PRPSAP1Q14558 356 aa4.25□□□□□ -1.73
SNHG1-214ENST00000540865 SLC10A1Q14973 349 aa4.25□□□□□ -1.73
SNHG1-214ENST00000540865 ARHGAP19Q14CB8 494 aa4.25□□□□□ -1.73
SNHG1-214ENST00000540865 TMED2Q15363 201 aa4.25□□□□□ -1.73
SNHG1-214ENST00000540865 HYAL4Q2M3T9 481 aa4.25□□□□□ -1.73
SNHG1-214ENST00000540865 CCSMST1Q4G0I0 132 aa4.25□□□□□ -1.73
SNHG1-214ENST00000540865 ODF2Q5BJF6 829 aa4.25□□□□□ -1.73
SNHG1-214ENST00000540865 ALKBH5Q6P6C2 394 aaKnown RBP4.25□□□□□ -1.73
SNHG1-214ENST00000540865 SUSD1Q6UWL2 747 aa4.25□□□□□ -1.73
SNHG1-214ENST00000540865 SEM1Q6ZVN7 128 aa4.25□□□□□ -1.73
SNHG1-214ENST00000540865 MICALCLQ6ZW33 695 aa4.25□□□□□ -1.73
SNHG1-214ENST00000540865 PRSS41Q7RTY9 318 aa4.25□□□□□ -1.73
SNHG1-214ENST00000540865 ULK2Q8IYT8 1036 aa4.25□□□□□ -1.73
SNHG1-214ENST00000540865 FBXW8Q8N3Y1 598 aa4.25□□□□□ -1.73
SNHG1-214ENST00000540865 TMEM251Q8N6I4 163 aa4.25□□□□□ -1.73
SNHG1-214ENST00000540865 DTX3Q8N9I9 347 aa4.25□□□□□ -1.73
SNHG1-214ENST00000540865 PSD4Q8NDX1 1056 aa4.25□□□□□ -1.73
SNHG1-214ENST00000540865 NFAM1Q8NET5 270 aaPredicted RBP4.25□□□□□ -1.73
SNHG1-214ENST00000540865 GSDMBQ8TAX9 411 aa4.25□□□□□ -1.73
SNHG1-214ENST00000540865 LINC01560Q8TB33 94 aa4.25□□□□□ -1.73
SNHG1-214ENST00000540865 P3H4Q92791 437 aa4.25□□□□□ -1.73
SNHG1-214ENST00000540865 TSLPQ969D9 159 aa4.25□□□□□ -1.73
SNHG1-214ENST00000540865 PERPQ96FX8 193 aa4.25□□□□□ -1.73
SNHG1-214ENST00000540865 FOPNLQ96NB1 174 aa4.25□□□□□ -1.73
SNHG1-214ENST00000540865 ALS2CR12Q96Q35 445 aa4.25□□□□□ -1.73
SNHG1-214ENST00000540865 EBNA1BP2Q99848 306 aaKnown RBP4.25□□□□□ -1.73
SNHG1-214ENST00000540865 TBL1YQ9BQ87 522 aa4.25□□□□□ -1.73
SNHG1-214ENST00000540865 FAM173AQ9BQD7 235 aa4.25□□□□□ -1.73
SNHG1-214ENST00000540865 FERMT1Q9BQL6 677 aa4.25□□□□□ -1.73
SNHG1-214ENST00000540865 CNPPD1Q9BV87 410 aa4.25□□□□□ -1.73
SNHG1-214ENST00000540865 ACAT2Q9BWD1 397 aa4.25□□□□□ -1.73
SNHG1-214ENST00000540865 KRTAP9-8Q9BYQ0 159 aa4.25□□□□□ -1.73
SNHG1-214ENST00000540865 TTTY12Q9BZ98 90 aa4.25□□□□□ -1.73
SNHG1-214ENST00000540865 IL1RL2Q9HB29 575 aa4.25□□□□□ -1.73
SNHG1-214ENST00000540865 ANKHQ9HCJ1 492 aa4.25□□□□□ -1.73
SNHG1-214ENST00000540865 DEPPQ9NTK1 212 aa4.25□□□□□ -1.73
SNHG1-214ENST00000540865 OXSMQ9NWU1 459 aa4.25□□□□□ -1.73
SNHG1-214ENST00000540865 ALKBH4Q9NXW9 302 aa4.25□□□□□ -1.73
SNHG1-214ENST00000540865 DDX56Q9NY93 547 aaKnown RBP4.25□□□□□ -1.73
SNHG1-214ENST00000540865 CHMP5Q9NZZ3 219 aa4.25□□□□□ -1.73
SNHG1-214ENST00000540865 HCN3Q9P1Z3 774 aa4.25□□□□□ -1.73
SNHG1-214ENST00000540865 PCYOX1Q9UHG3 505 aa4.25□□□□□ -1.73
SNHG1-214ENST00000540865 TTC7AQ9ULT0 858 aaPredicted RBP4.25□□□□□ -1.73
SNHG1-214ENST00000540865 EIF3LQ9Y262 564 aaKnown RBP4.25□□□□□ -1.73
SNHG1-214ENST00000540865 YARS2Q9Y2Z4 477 aaKnown RBP4.25□□□□□ -1.73
SNHG1-214ENST00000540865 LIPGQ9Y5X9 500 aa4.25□□□□□ -1.73
SNHG1-214ENST00000540865 PKD1L1Q8TDX9 2849 aa4.25□□□□□ -1.73
SNHG1-214ENST00000540865 TRRAPQ9Y4A5 3859 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 KCNE1BA0A087WTH5 132 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 A0A087X0T9 212 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 TRGV5A0A0B4J1U4 118 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 CCDC162PA2VCL2 907 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 SH3D21A4FU49 640 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 MROH6A6NGR9 719 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 ZNF839A8K0R7 811 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 A8MVJ9 347 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 AHRRA9YTQ3 701 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 SGK494L7N484 410 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 HAT1O14929 419 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 CASKO14936 926 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 KPNA5O15131 536 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 RDH16O75452 317 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 CDC123O75794 336 aaPredicted RBP4.24□□□□□ -1.73
SNHG1-214ENST00000540865 EPPINO95925 133 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 IL18BPO95998 194 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 STATHP02808 62 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 SERPING1P05155 500 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 FHP07954 510 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 ENO2P09104 434 aaPredicted RBP4.24□□□□□ -1.73
SNHG1-214ENST00000540865 H2AFZP0C0S5 128 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 FAM228BP0C875 321 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 PAX1P15863 534 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 IL1RNP18510 177 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 CNR1P21554 472 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 JAK1P23458 1154 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 HRH2P25021 359 aa4.24□□□□□ -1.73
SNHG1-214ENST00000540865 PTX3P26022 381 aaPredicted RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms