RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 FAM172BPA6NC97 362 aa11.72□□□□□ -0.53
NPC1-202ENST00000540608 H3BM21 787 aa11.72□□□□□ -0.53
NPC1-202ENST00000540608 RGS5O15539 181 aa11.72□□□□□ -0.53
NPC1-202ENST00000540608 IDH3BO43837 385 aa11.72□□□□□ -0.53
NPC1-202ENST00000540608 PLXNA2O75051 1894 aa11.72□□□□□ -0.53
NPC1-202ENST00000540608 KLK1P06870 262 aa11.72□□□□□ -0.53
NPC1-202ENST00000540608 UQCRC2P22695 453 aa11.72□□□□□ -0.53
NPC1-202ENST00000540608 PSMA1P25786 263 aaKnown RBP11.72□□□□□ -0.53
NPC1-202ENST00000540608 CA8P35219 290 aa11.72□□□□□ -0.53
NPC1-202ENST00000540608 SOAT1P35610 550 aa11.72□□□□□ -0.53
NPC1-202ENST00000540608 SOX3P41225 446 aa11.72□□□□□ -0.53
NPC1-202ENST00000540608 LIM2P55344 173 aa11.72□□□□□ -0.53
NPC1-202ENST00000540608 TBPL1P62380 186 aa11.72□□□□□ -0.53
NPC1-202ENST00000540608 ZNF284Q2VY69 593 aa11.72□□□□□ -0.53
NPC1-202ENST00000540608 LEXMQ3ZCV2 418 aa11.72□□□□□ -0.53
NPC1-202ENST00000540608 ATAD3CQ5T2N8 411 aa11.72□□□□□ -0.53
NPC1-202ENST00000540608 RNLSQ5VYX0 342 aa11.72□□□□□ -0.53
NPC1-202ENST00000540608 TMEM220Q6QAJ8 160 aa11.72□□□□□ -0.53
NPC1-202ENST00000540608 GPR151Q8TDV0 419 aa11.72□□□□□ -0.53
NPC1-202ENST00000540608 APOBEC4Q8WW27 367 aaKnown RBP11.72□□□□□ -0.53
NPC1-202ENST00000540608 GLYATL1Q969I3 302 aa11.72□□□□□ -0.53
NPC1-202ENST00000540608 PDXPQ96GD0 296 aa11.72□□□□□ -0.53
NPC1-202ENST00000540608 SNX18Q96RF0 628 aa11.72□□□□□ -0.53
NPC1-202ENST00000540608 TMCC3Q9ULS5 477 aa11.72□□□□□ -0.53
NPC1-202ENST00000540608 MAFFQ9ULX9 164 aa11.72□□□□□ -0.53
NPC1-202ENST00000540608 V9GYH0 126 aa11.72□□□□□ -0.53
NPC1-202ENST00000540608 CSO75390 466 aaKnown RBP11.71□□□□□ -0.53
NPC1-202ENST00000540608 CKMT1AP12532 417 aa11.71□□□□□ -0.53
NPC1-202ENST00000540608 TIMP2P16035 220 aa11.71□□□□□ -0.53
NPC1-202ENST00000540608 RECQLP46063 649 aaPredicted RBP11.71□□□□□ -0.53
NPC1-202ENST00000540608 RFX2P48378 723 aa11.71□□□□□ -0.53
NPC1-202ENST00000540608 NXNL2Q5VZ03 156 aa11.71□□□□□ -0.53
NPC1-202ENST00000540608 TMPRSS11AQ6ZMR5 421 aa11.71□□□□□ -0.53
NPC1-202ENST00000540608 TECPR1Q7Z6L1 1165 aa11.71□□□□□ -0.53
NPC1-202ENST00000540608 DDX53Q86TM3 631 aaKnown RBP11.71□□□□□ -0.53
NPC1-202ENST00000540608 SLC34A3Q8N130 599 aa11.71□□□□□ -0.53
NPC1-202ENST00000540608 ZNF689Q96CS4 500 aaPredicted RBP11.71□□□□□ -0.53
NPC1-202ENST00000540608 WDFY2Q96P53 400 aa11.71□□□□□ -0.53
NPC1-202ENST00000540608 NEDD4LQ96PU5 975 aa11.71□□□□□ -0.53
NPC1-202ENST00000540608 SGPP1Q9BX95 441 aa11.71□□□□□ -0.53
NPC1-202ENST00000540608 SLC6A16Q9GZN6 736 aa11.71□□□□□ -0.53
NPC1-202ENST00000540608 C11orf16Q9NQ32 467 aa11.71□□□□□ -0.53
NPC1-202ENST00000540608 STUB1Q9UNE7 303 aa11.71□□□□□ -0.53
NPC1-202ENST00000540608 ICKQ9UPZ9 632 aa11.71□□□□□ -0.53
NPC1-202ENST00000540608 MGAT4BQ9UQ53 548 aa11.71□□□□□ -0.53
NPC1-202ENST00000540608 CCL26Q9Y258 94 aa11.71□□□□□ -0.53
NPC1-202ENST00000540608 RPL36Q9Y3U8 105 aaKnown RBP11.71□□□□□ -0.53
NPC1-202ENST00000540608 HELZP42694 1942 aaKnown RBP11.71□□□□□ -0.54
NPC1-202ENST00000540608 DENND4CQ5VZ89 1909 aa11.71□□□□□ -0.54
NPC1-202ENST00000540608 ZNF670-ZNF695F2Z2N8 137 aa11.71□□□□□ -0.54
NPC1-202ENST00000540608 FAM227AF5H4B4 570 aa11.71□□□□□ -0.54
NPC1-202ENST00000540608 TGM5O43548 720 aa11.71□□□□□ -0.54
NPC1-202ENST00000540608 SEMA3DO95025 777 aa11.71□□□□□ -0.54
NPC1-202ENST00000540608 ITGB7P26010 798 aa11.71□□□□□ -0.54
NPC1-202ENST00000540608 DGKEP52429 567 aa11.71□□□□□ -0.54
NPC1-202ENST00000540608 C12orf73Q69YU5 71 aa11.71□□□□□ -0.54
NPC1-202ENST00000540608 IKBIPQ70UQ0 350 aa11.71□□□□□ -0.54
NPC1-202ENST00000540608 TMEM25Q86YD3 366 aa11.71□□□□□ -0.54
NPC1-202ENST00000540608 RAB43Q86YS6 212 aa11.71□□□□□ -0.54
NPC1-202ENST00000540608 NANOGP1Q8N7R0 232 aa11.71□□□□□ -0.54
NPC1-202ENST00000540608 VANGL1Q8TAA9 524 aaPredicted RBP11.71□□□□□ -0.54
NPC1-202ENST00000540608 MND1Q9BWT6 205 aa11.71□□□□□ -0.54
NPC1-202ENST00000540608 SLC46A2Q9BY10 475 aa11.71□□□□□ -0.54
NPC1-202ENST00000540608 NLNQ9BYT8 704 aa11.71□□□□□ -0.54
NPC1-202ENST00000540608 SPG21Q9NZD8 308 aa11.71□□□□□ -0.54
NPC1-202ENST00000540608 LEFTY1O75610 366 aa11.7□□□□□ -0.54
NPC1-202ENST00000540608 CYP7B1O75881 506 aa11.7□□□□□ -0.54
NPC1-202ENST00000540608 IL3P08700 152 aa11.7□□□□□ -0.54
NPC1-202ENST00000540608 DEFB103AP81534 67 aa11.7□□□□□ -0.54
NPC1-202ENST00000540608 ARSIQ5FYB1 569 aa11.7□□□□□ -0.54
NPC1-202ENST00000540608 ARMC4Q5T2S8 1044 aa11.7□□□□□ -0.54
NPC1-202ENST00000540608 C6orf183Q5T699 404 aa11.7□□□□□ -0.54
NPC1-202ENST00000540608 NXPE4Q6UWF7 544 aa11.7□□□□□ -0.54
NPC1-202ENST00000540608 CEACAM20Q6UY09 585 aa11.7□□□□□ -0.54
NPC1-202ENST00000540608 ZNF517Q6ZMY9 492 aaPredicted RBP11.7□□□□□ -0.54
NPC1-202ENST00000540608 IL17RCQ8NAC3 791 aa11.7□□□□□ -0.54
NPC1-202ENST00000540608 DEFB118Q96PH6 123 aa11.7□□□□□ -0.54
NPC1-202ENST00000540608 SNTG1Q9NSN8 517 aa11.7□□□□□ -0.54
NPC1-202ENST00000540608 SAGE1Q9NXZ1 904 aa11.7□□□□□ -0.54
NPC1-202ENST00000540608 DNAJC27Q9NZQ0 273 aa11.7□□□□□ -0.54
NPC1-202ENST00000540608 TAAR2Q9P1P5 351 aa11.7□□□□□ -0.54
NPC1-202ENST00000540608 SNX11Q9Y5W9 270 aa11.7□□□□□ -0.54
NPC1-202ENST00000540608 HYKKA2RU49 373 aa11.7□□□□□ -0.54
NPC1-202ENST00000540608 AP3D1O14617 1153 aa11.7□□□□□ -0.54
NPC1-202ENST00000540608 PBLDP30039 288 aaPredicted RBP11.7□□□□□ -0.54
NPC1-202ENST00000540608 DDOSTP39656 456 aa11.7□□□□□ -0.54
NPC1-202ENST00000540608 PSPHP78330 225 aa11.7□□□□□ -0.54
NPC1-202ENST00000540608 TSTA3Q13630 321 aaPredicted RBP11.7□□□□□ -0.54
NPC1-202ENST00000540608 SEC23BQ15437 767 aa11.7□□□□□ -0.54
NPC1-202ENST00000540608 ZNF79Q15937 498 aa11.7□□□□□ -0.54
NPC1-202ENST00000540608 BAK1Q16611 211 aa11.7□□□□□ -0.54
NPC1-202ENST00000540608 ZNF658BQ4V348 819 aaPredicted RBP11.7□□□□□ -0.54
NPC1-202ENST00000540608 DCST1Q5T197 706 aa11.7□□□□□ -0.54
NPC1-202ENST00000540608 PROKR2Q8NFJ6 384 aa11.7□□□□□ -0.54
NPC1-202ENST00000540608 SLC38A5Q8WUX1 472 aa11.7□□□□□ -0.54
NPC1-202ENST00000540608 SLC5A11Q8WWX8 675 aa11.7□□□□□ -0.54
NPC1-202ENST00000540608 SRRQ9GZT4 340 aa11.7□□□□□ -0.54
NPC1-202ENST00000540608 CXorf36Q9H7Y0 433 aa11.7□□□□□ -0.54
NPC1-202ENST00000540608 A4GALTQ9NPC4 353 aa11.7□□□□□ -0.54
NPC1-202ENST00000540608 MIEF1Q9NQG6 463 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms