RNA–Protein interactions for RNA: ENST00000540128.1

TRIM65-202, Transcript of tripartite motif containing 65, humanhuman

TSL 3

Gene TRIM65, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-202ENST00000540128 SPIN4Q56A73 249 aa20.69■□□□□ 0.9
TRIM65-202ENST00000540128 HHATQ5VTY9 493 aa20.69■□□□□ 0.9
TRIM65-202ENST00000540128 C18orf63Q68DL7 685 aa20.69■□□□□ 0.9
TRIM65-202ENST00000540128 KBTBD2Q8IY47 623 aa20.69■□□□□ 0.9
TRIM65-202ENST00000540128 EFCAB3Q8N7B9 438 aa20.69■□□□□ 0.9
TRIM65-202ENST00000540128 ANKRD42Q8N9B4 389 aa20.69■□□□□ 0.9
TRIM65-202ENST00000540128 PPP1R14CQ8TAE6 165 aa20.69■□□□□ 0.9
TRIM65-202ENST00000540128 M1APQ8TC57 530 aa20.69■□□□□ 0.9
TRIM65-202ENST00000540128 APIPQ96GX9 242 aa20.69■□□□□ 0.9
TRIM65-202ENST00000540128 SEMA4CQ9C0C4 833 aa20.69■□□□□ 0.9
TRIM65-202ENST00000540128 LHPPQ9H008 270 aa20.69■□□□□ 0.9
TRIM65-202ENST00000540128 ZNF552Q9H707 407 aaPredicted RBP20.69■□□□□ 0.9
TRIM65-202ENST00000540128 RPF2Q9H7B2 306 aaKnown RBP20.69■□□□□ 0.9
TRIM65-202ENST00000540128 GPR83Q9NYM4 423 aa20.69■□□□□ 0.9
TRIM65-202ENST00000540128 MCM8Q9UJA3 840 aa20.69■□□□□ 0.9
TRIM65-202ENST00000540128 RALYQ9UKM9 306 aaKnown RBP20.69■□□□□ 0.9
TRIM65-202ENST00000540128 SASH3O75995 380 aa20.68■□□□□ 0.9
TRIM65-202ENST00000540128 RSL1D1O76021 490 aaKnown RBP20.68■□□□□ 0.9
TRIM65-202ENST00000540128 SEC24DO94855 1032 aaPredicted RBP20.68■□□□□ 0.9
TRIM65-202ENST00000540128 PRR35P0CG20 571 aa20.68■□□□□ 0.9
TRIM65-202ENST00000540128 PRPH2P23942 346 aa20.68■□□□□ 0.9
TRIM65-202ENST00000540128 ITGA3P26006 1051 aa20.68■□□□□ 0.9
TRIM65-202ENST00000540128 MAPK12P53778 367 aa20.68■□□□□ 0.9
TRIM65-202ENST00000540128 BIKQ13323 160 aa20.68■□□□□ 0.9
TRIM65-202ENST00000540128 SERTAD2Q14140 314 aa20.68■□□□□ 0.9
TRIM65-202ENST00000540128 TERF2Q15554 542 aa20.68■□□□□ 0.9
TRIM65-202ENST00000540128 EXT1Q16394 746 aa20.68■□□□□ 0.9
TRIM65-202ENST00000540128 TTMPQ5BVD1 217 aa20.68■□□□□ 0.9
TRIM65-202ENST00000540128 PAPD4Q6PIY7 484 aaKnown RBP20.68■□□□□ 0.9
TRIM65-202ENST00000540128 PSMF1Q92530 271 aa20.68■□□□□ 0.9
TRIM65-202ENST00000540128 TM4SF18Q96CE8 201 aa20.68■□□□□ 0.9
TRIM65-202ENST00000540128 NUDT9Q9BW91 350 aa20.68■□□□□ 0.9
TRIM65-202ENST00000540128 TUBB1Q9H4B7 451 aa20.68■□□□□ 0.9
TRIM65-202ENST00000540128 NKIRAS1Q9NYS0 192 aa20.68■□□□□ 0.9
TRIM65-202ENST00000540128 C5AR2Q9P296 337 aa20.68■□□□□ 0.9
TRIM65-202ENST00000540128 VTI1BQ9UEU0 232 aa20.68■□□□□ 0.9
TRIM65-202ENST00000540128 G3BP2Q9UN86 482 aaKnown RBP20.68■□□□□ 0.9
TRIM65-202ENST00000540128 PPIEQ9UNP9 301 aaKnown RBP20.68■□□□□ 0.9
TRIM65-202ENST00000540128 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.68■□□□□ 0.9
TRIM65-202ENST00000540128 ARHGAP10A1A4S6 786 aa20.67■□□□□ 0.9
TRIM65-202ENST00000540128 SLC28A1O00337 649 aa20.67■□□□□ 0.9
TRIM65-202ENST00000540128 GUCY1B2O75343 617 aa20.67■□□□□ 0.9
TRIM65-202ENST00000540128 AIFM1O95831 613 aa20.67■□□□□ 0.9
TRIM65-202ENST00000540128 CHEK2O96017 543 aa20.67■□□□□ 0.9
TRIM65-202ENST00000540128 PPP2R1BP30154 601 aa20.67■□□□□ 0.9
TRIM65-202ENST00000540128 ABCE1P61221 599 aaKnown RBP20.67■□□□□ 0.9
TRIM65-202ENST00000540128 RAE1P78406 368 aaKnown RBP20.67■□□□□ 0.9
TRIM65-202ENST00000540128 ACSM2AQ08AH3 577 aa20.67■□□□□ 0.9
TRIM65-202ENST00000540128 VWA5B1Q5TIE3 1220 aa20.67■□□□□ 0.9
TRIM65-202ENST00000540128 ACSM2BQ68CK6 577 aa20.67■□□□□ 0.9
TRIM65-202ENST00000540128 JMJD6Q6NYC1 403 aaPredicted RBP20.67■□□□□ 0.9
TRIM65-202ENST00000540128 Q6ZSR9 355 aa20.67■□□□□ 0.9
TRIM65-202ENST00000540128 CLNKQ7Z7G1 428 aa20.67■□□□□ 0.9
TRIM65-202ENST00000540128 NFAM1Q8NET5 270 aaPredicted RBP20.67■□□□□ 0.9
TRIM65-202ENST00000540128 FAM76AQ8TAV0 307 aa20.67■□□□□ 0.9
TRIM65-202ENST00000540128 THOC3Q96J01 351 aaKnown RBP20.67■□□□□ 0.9
TRIM65-202ENST00000540128 ALOXE3Q9BYJ1 711 aa20.67■□□□□ 0.9
TRIM65-202ENST00000540128 WDR41Q9HAD4 459 aa20.67■□□□□ 0.9
TRIM65-202ENST00000540128 MMP25Q9NPA2 562 aa20.67■□□□□ 0.9
TRIM65-202ENST00000540128 TEX10Q9NXF1 929 aaPredicted RBP20.67■□□□□ 0.9
TRIM65-202ENST00000540128 ZDHHC2Q9UIJ5 367 aa20.67■□□□□ 0.9
TRIM65-202ENST00000540128 HAO1Q9UJM8 370 aa20.67■□□□□ 0.9
TRIM65-202ENST00000540128 TMEM233B4DJY2 109 aa20.66■□□□□ 0.9
TRIM65-202ENST00000540128 K7EM74 188 aa20.66■□□□□ 0.9
TRIM65-202ENST00000540128 ITM2AO43736 263 aa20.66■□□□□ 0.9
TRIM65-202ENST00000540128 FGF17O60258 216 aa20.66■□□□□ 0.9
TRIM65-202ENST00000540128 PDGFAP04085 211 aa20.66■□□□□ 0.9
TRIM65-202ENST00000540128 NR2F6P10588 404 aa20.66■□□□□ 0.9
TRIM65-202ENST00000540128 BGNP21810 368 aa20.66■□□□□ 0.9
TRIM65-202ENST00000540128 PGDP52209 483 aa20.66■□□□□ 0.9
TRIM65-202ENST00000540128 SLC26A5P58743 744 aa20.66■□□□□ 0.9
TRIM65-202ENST00000540128 STX4Q12846 297 aa20.66■□□□□ 0.9
TRIM65-202ENST00000540128 IMPG1Q17R60 797 aa20.66■□□□□ 0.9
TRIM65-202ENST00000540128 LACTB2Q53H82 288 aaPredicted RBP20.66■□□□□ 0.9
TRIM65-202ENST00000540128 SH2D4BQ5SQS7 431 aa20.66■□□□□ 0.9
TRIM65-202ENST00000540128 NDUFAF5Q5TEU4 345 aa20.66■□□□□ 0.9
TRIM65-202ENST00000540128 HPS6Q86YV9 775 aa20.66■□□□□ 0.9
TRIM65-202ENST00000540128 PAIP2Q9BPZ3 127 aaKnown RBP20.66■□□□□ 0.9
TRIM65-202ENST00000540128 ADAP2Q9NPF8 381 aa20.66■□□□□ 0.9
TRIM65-202ENST00000540128 TP53TG5Q9Y2B4 290 aa20.66■□□□□ 0.9
TRIM65-202ENST00000540128 ZNF451Q9Y4E5 1061 aa20.66■□□□□ 0.9
TRIM65-202ENST00000540128 PCDHA9Q9Y5H5 950 aa20.66■□□□□ 0.9
TRIM65-202ENST00000540128 SAGE2PA6NJ88 616 aa20.65■□□□□ 0.9
TRIM65-202ENST00000540128 HMGB1P1B2RPK0 211 aaPredicted RBP20.65■□□□□ 0.9
TRIM65-202ENST00000540128 LDB3O75112 727 aa20.65■□□□□ 0.9
TRIM65-202ENST00000540128 GPR75O95800 540 aa20.65■□□□□ 0.9
TRIM65-202ENST00000540128 NEFHP12036 1026 aa20.65■□□□□ 0.9
TRIM65-202ENST00000540128 SLC1A6P48664 564 aa20.65■□□□□ 0.9
TRIM65-202ENST00000540128 STX3Q13277 289 aa20.65■□□□□ 0.9
TRIM65-202ENST00000540128 KIAA0040Q15053 153 aa20.65■□□□□ 0.9
TRIM65-202ENST00000540128 ELAVL1Q15717 326 aaKnown RBP20.65■□□□□ 0.9
TRIM65-202ENST00000540128 AGAP7PQ5VUJ5 663 aa20.65■□□□□ 0.9
TRIM65-202ENST00000540128 IRAK1BP1Q5VVH5 260 aa20.65■□□□□ 0.9
TRIM65-202ENST00000540128 OR52E8Q6IFG1 317 aa20.65■□□□□ 0.9
TRIM65-202ENST00000540128 H3F3CQ6NXT2 135 aa20.65■□□□□ 0.9
TRIM65-202ENST00000540128 IGFL3Q6UXB1 125 aa20.65■□□□□ 0.9
TRIM65-202ENST00000540128 DNAJB14Q8TBM8 379 aa20.65■□□□□ 0.9
TRIM65-202ENST00000540128 TWIST2Q8WVJ9 160 aa20.65■□□□□ 0.9
TRIM65-202ENST00000540128 AGAP4Q96P64 663 aa20.65■□□□□ 0.9
TRIM65-202ENST00000540128 SORT1Q99523 831 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms