RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 PDZD3Q86UT5 571 aa13.27□□□□□ -0.28
SCNN1A-215ENST00000540037 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.27□□□□□ -0.28
SCNN1A-215ENST00000540037 ELMOD2Q8IZ81 293 aa13.27□□□□□ -0.28
SCNN1A-215ENST00000540037 DCAF4L2Q8NA75 395 aa13.27□□□□□ -0.28
SCNN1A-215ENST00000540037 ENKURQ8TC29 256 aa13.27□□□□□ -0.28
SCNN1A-215ENST00000540037 NELL2Q99435 816 aa13.27□□□□□ -0.28
SCNN1A-215ENST00000540037 ARHGAP39Q9C0H5 1083 aa13.27□□□□□ -0.28
SCNN1A-215ENST00000540037 FZD3Q9NPG1 666 aa13.27□□□□□ -0.28
SCNN1A-215ENST00000540037 ALG5Q9Y673 324 aa13.27□□□□□ -0.28
SCNN1A-215ENST00000540037 ZNF106Q9H2Y7 1883 aaKnown RBP13.27□□□□□ -0.29
SCNN1A-215ENST00000540037 CKAP5Q14008 2032 aa13.27□□□□□ -0.29
SCNN1A-215ENST00000540037 IQCMA0A1B0GVH7 501 aa13.27□□□□□ -0.29
SCNN1A-215ENST00000540037 SERTM1A2A2V5 107 aa13.27□□□□□ -0.29
SCNN1A-215ENST00000540037 TLX2O43763 284 aaPredicted RBP13.27□□□□□ -0.29
SCNN1A-215ENST00000540037 IFNW1P05000 195 aa13.27□□□□□ -0.29
SCNN1A-215ENST00000540037 C21orf58P58505 322 aa13.27□□□□□ -0.29
SCNN1A-215ENST00000540037 RPS25P62851 125 aaKnown RBP13.27□□□□□ -0.29
SCNN1A-215ENST00000540037 TNFAIP8L2Q6P589 184 aaPredicted RBP13.27□□□□□ -0.29
SCNN1A-215ENST00000540037 OLIG3Q7RTU3 272 aa13.27□□□□□ -0.29
SCNN1A-215ENST00000540037 CBARPQ8N350 705 aaPredicted RBP13.27□□□□□ -0.29
SCNN1A-215ENST00000540037 ADAMTS19Q8TE59 1207 aa13.27□□□□□ -0.29
SCNN1A-215ENST00000540037 RACGAP1Q9H0H5 632 aa13.27□□□□□ -0.29
SCNN1A-215ENST00000540037 STOX2Q9P2F5 926 aaPredicted RBP13.27□□□□□ -0.29
SCNN1A-215ENST00000540037 NLKQ9UBE8 527 aa13.27□□□□□ -0.29
SCNN1A-215ENST00000540037 DKK3Q9UBP4 350 aa13.27□□□□□ -0.29
SCNN1A-215ENST00000540037 SPIN1Q9Y657 262 aaPredicted RBP13.27□□□□□ -0.29
SCNN1A-215ENST00000540037 DSPPQ9NZW4 1301 aa13.27□□□□□ -0.29
SCNN1A-215ENST00000540037 FAM25AB3EWG3 89 aa13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 FAM25CB3EWG5 89 aa13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 FAM25GB3EWG6 89 aa13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 SGTAO43765 313 aa13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 PRKYO43930 277 aa13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 NCR1O76036 304 aa13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 ENDOUP21128 410 aaKnown RBP13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 ITGB7P26010 798 aa13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 CD79BP40259 229 aa13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 ASMTP46597 345 aa13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 C2orf80Q0P641 193 aa13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 INSL4Q14641 139 aa13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 XKRXQ6PP77 449 aa13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 TPRG1Q6ZUI0 275 aa13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 SHFQ7M4L6 423 aa13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 COMMD6Q7Z4G1 85 aa13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 OR4D11Q8NGI4 311 aa13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 SUN5Q8TC36 379 aa13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 DEDD2Q8WXF8 326 aa13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 ZBED6CLQ96FA7 236 aaPredicted RBP13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 DCLRE1CQ96SD1 692 aaKnown RBP13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 MND1Q9BWT6 205 aa13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 UCK2Q9BZX2 261 aa13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 REEP4Q9H6H4 257 aa13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 RETREG1Q9H6L5 497 aa13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 RC3H2Q9HBD1 1191 aaKnown RBP13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 B3GAT2Q9NPZ5 323 aa13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 TMEM88BA6NKF7 163 aa13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 MYL12BO14950 172 aa13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 POLR1CO15160 346 aaPredicted RBP13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 KLHL18O94889 574 aa13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 CELF2O95319 508 aaKnown RBP13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 PIPP12273 146 aaPredicted RBP13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 RHCEP18577 417 aa13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 PTX3P26022 381 aaPredicted RBP13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 TAS2R50P59544 299 aa13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 QPRTQ15274 297 aa13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 GPR19Q15760 415 aa13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 BTBD16Q32M84 506 aa13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 CRB2Q5IJ48 1285 aa13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 GRHL2Q6ISB3 625 aa13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 DEF8Q6ZN54 512 aa13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 ARL14EPQ8N8R7 260 aaPredicted RBP13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 FAM181AQ8N9Y4 354 aa13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 OR52P1PQ8NH57 321 aa13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 GRPEL2Q8TAA5 225 aa13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 BTN2A2Q8WVV5 523 aa13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 TM9SF4Q92544 642 aa13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 UPF1Q92900 1129 aaKnown RBP eCLIP13.26□□□□□ -0.298e-8■■■■■ 56.4
SCNN1A-215ENST00000540037 RAB8BQ92930 207 aa13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 C1GALT1C1Q96EU7 318 aa13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 SCRN2Q96FV2 425 aa13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 FRMPD3Q5JV73 1810 aa13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 IGLV3-16A0A075B6K0 115 aa13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 H0YIV9 168 aa13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 OSMP13725 252 aa13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 ALAS2P22557 587 aa13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 SERPINA4P29622 427 aa13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 MLLT3P42568 568 aaPredicted RBP13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 XKP51811 444 aa13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 PCBP3P57721 371 aaKnown RBP13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 TAF12Q16514 161 aa13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 TXNDC8Q6A555 127 aa13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 RETSATQ6NUM9 610 aa13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 CAMKMTQ7Z624 323 aa13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 TMC8Q8IU68 726 aa13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 GPR32P1Q8NGA4 272 aa13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 ZFAND1Q8TCF1 268 aa13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 GATAD2BQ8WXI9 593 aa13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 CLP1Q92989 425 aaKnown RBP13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 KATNB1Q9BVA0 655 aa13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 ZDHHC6Q9H6R6 413 aa13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 MVB12BQ9H7P6 319 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms