RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 NCEH1Q6PIU2 408 aa13.94□□□□□ -0.18
CACNB1-206ENST00000539338 ZNF782Q6ZMW2 699 aaPredicted RBP13.94□□□□□ -0.18
CACNB1-206ENST00000539338 USP53Q70EK8 1073 aa13.94□□□□□ -0.18
CACNB1-206ENST00000539338 CLECL1Q8IZS7 167 aa13.94□□□□□ -0.18
CACNB1-206ENST00000539338 TRAM1L1Q8N609 369 aa13.94□□□□□ -0.18
CACNB1-206ENST00000539338 RC3H2Q9HBD1 1191 aaKnown RBP13.94□□□□□ -0.18
CACNB1-206ENST00000539338 WRBO00258 174 aa13.94□□□□□ -0.18
CACNB1-206ENST00000539338 VILLO15195 856 aa13.94□□□□□ -0.18
CACNB1-206ENST00000539338 TLX3O43711 291 aaPredicted RBP13.94□□□□□ -0.18
CACNB1-206ENST00000539338 COQ9O75208 318 aa13.94□□□□□ -0.18
CACNB1-206ENST00000539338 KAT7O95251 611 aa13.94□□□□□ -0.18
CACNB1-206ENST00000539338 SF3B4Q15427 424 aaKnown RBP eCLIP13.94□□□□□ -0.18
CACNB1-206ENST00000539338 SLC36A3Q495N2 470 aa13.94□□□□□ -0.18
CACNB1-206ENST00000539338 VTCN1Q7Z7D3 282 aa13.94□□□□□ -0.18
CACNB1-206ENST00000539338 SLC37A3Q8NCC5 494 aa13.94□□□□□ -0.18
CACNB1-206ENST00000539338 THEM6Q8WUY1 208 aa13.94□□□□□ -0.18
CACNB1-206ENST00000539338 JPH3Q8WXH2 748 aaPredicted RBP13.94□□□□□ -0.18
CACNB1-206ENST00000539338 EDAQ92838 391 aa13.94□□□□□ -0.18
CACNB1-206ENST00000539338 PIP5K1AQ99755 562 aa13.94□□□□□ -0.18
CACNB1-206ENST00000539338 CHMP1AQ9HD42 196 aaPredicted RBP13.94□□□□□ -0.18
CACNB1-206ENST00000539338 PAK1IP1Q9NWT1 392 aaPredicted RBP13.94□□□□□ -0.18
CACNB1-206ENST00000539338 ZNF69Q9UC07 566 aa13.94□□□□□ -0.18
CACNB1-206ENST00000539338 TTC34A8MYJ7 566 aa13.94□□□□□ -0.18
CACNB1-206ENST00000539338 YES1P07947 543 aa13.94□□□□□ -0.18
CACNB1-206ENST00000539338 BPIP17213 487 aa13.94□□□□□ -0.18
CACNB1-206ENST00000539338 POLR2CP19387 275 aaPredicted RBP13.94□□□□□ -0.18
CACNB1-206ENST00000539338 CBLP22681 906 aa13.94□□□□□ -0.18
CACNB1-206ENST00000539338 HLCSP50747 726 aa13.94□□□□□ -0.18
CACNB1-206ENST00000539338 ARHGDIBP52566 201 aa13.94□□□□□ -0.18
CACNB1-206ENST00000539338 CEBPGP53567 150 aa13.94□□□□□ -0.18
CACNB1-206ENST00000539338 FOXA1P55317 472 aa13.94□□□□□ -0.18
CACNB1-206ENST00000539338 CD47Q08722 323 aa13.94□□□□□ -0.18
CACNB1-206ENST00000539338 DSG2Q14126 1118 aa13.94□□□□□ -0.18
CACNB1-206ENST00000539338 ZNF234Q14588 700 aa13.94□□□□□ -0.18
CACNB1-206ENST00000539338 LCN8Q6JVE9 175 aa13.94□□□□□ -0.18
CACNB1-206ENST00000539338 SETD6Q8TBK2 473 aa13.94□□□□□ -0.18
CACNB1-206ENST00000539338 DNAJA4Q8WW22 397 aaPredicted RBP13.94□□□□□ -0.18
CACNB1-206ENST00000539338 NRG4Q8WWG1 115 aa13.94□□□□□ -0.18
CACNB1-206ENST00000539338 ZIC5Q96T25 663 aa13.94□□□□□ -0.18
CACNB1-206ENST00000539338 SCDO00767 359 aa13.93□□□□□ -0.18
CACNB1-206ENST00000539338 SLC16A5O15375 505 aa13.93□□□□□ -0.18
CACNB1-206ENST00000539338 ARL6IP5O75915 188 aa13.93□□□□□ -0.18
CACNB1-206ENST00000539338 P4HA3Q7Z4N8 544 aa13.93□□□□□ -0.18
CACNB1-206ENST00000539338 ARL14Q8N4G2 192 aa13.93□□□□□ -0.18
CACNB1-206ENST00000539338 PHOSPHO1Q8TCT1 267 aa13.93□□□□□ -0.18
CACNB1-206ENST00000539338 MYRFLQ96LU7 910 aa13.93□□□□□ -0.18
CACNB1-206ENST00000539338 DUSP23Q9BVJ7 150 aa13.93□□□□□ -0.18
CACNB1-206ENST00000539338 BEX2Q9BXY8 128 aa13.93□□□□□ -0.18
CACNB1-206ENST00000539338 RBCK1Q9BYM8 510 aa13.93□□□□□ -0.18
CACNB1-206ENST00000539338 MMP27Q9H306 513 aa13.93□□□□□ -0.18
CACNB1-206ENST00000539338 DPAGT1Q9H3H5 408 aa13.93□□□□□ -0.18
CACNB1-206ENST00000539338 BEX1Q9HBH7 125 aa13.93□□□□□ -0.18
CACNB1-206ENST00000539338 GJD2Q9UKL4 321 aa13.93□□□□□ -0.18
CACNB1-206ENST00000539338 COL2A1P02458 1487 aaPredicted RBP13.93□□□□□ -0.18
CACNB1-206ENST00000539338 RTCAO00442 366 aaKnown RBP13.93□□□□□ -0.18
CACNB1-206ENST00000539338 PROM1O43490 865 aa13.93□□□□□ -0.18
CACNB1-206ENST00000539338 EDIL3O43854 480 aa13.93□□□□□ -0.18
CACNB1-206ENST00000539338 HSD17B1P14061 328 aa13.93□□□□□ -0.18
CACNB1-206ENST00000539338 CELP19835 753 aa13.93□□□□□ -0.18
CACNB1-206ENST00000539338 GCAP28676 217 aa13.93□□□□□ -0.18
CACNB1-206ENST00000539338 GTDC1Q4AE62 458 aa13.93□□□□□ -0.18
CACNB1-206ENST00000539338 SDR16C5Q8N3Y7 309 aa13.93□□□□□ -0.18
CACNB1-206ENST00000539338 F2RL3Q96RI0 385 aa13.93□□□□□ -0.18
CACNB1-206ENST00000539338 TRIB3Q96RU7 358 aa13.93□□□□□ -0.18
CACNB1-206ENST00000539338 C14orf119Q9NWQ9 140 aa13.93□□□□□ -0.18
CACNB1-206ENST00000539338 ZNF821O75541 412 aaPredicted RBP13.93□□□□□ -0.18
CACNB1-206ENST00000539338 CNMDO75829 334 aa13.93□□□□□ -0.18
CACNB1-206ENST00000539338 STSP08842 583 aa13.93□□□□□ -0.18
CACNB1-206ENST00000539338 C7P10643 843 aa13.93□□□□□ -0.18
CACNB1-206ENST00000539338 GGT1P19440 569 aa13.93□□□□□ -0.18
CACNB1-206ENST00000539338 NPRL3Q12980 569 aa13.93□□□□□ -0.18
CACNB1-206ENST00000539338 GRIK2Q13002 908 aa13.93□□□□□ -0.18
CACNB1-206ENST00000539338 PRRT3Q5FWE3 981 aa13.93□□□□□ -0.18
CACNB1-206ENST00000539338 LRRC20Q8TCA0 184 aa13.93□□□□□ -0.18
CACNB1-206ENST00000539338 ADAMTS19Q8TE59 1207 aa13.93□□□□□ -0.18
CACNB1-206ENST00000539338 OR5P2Q8WZ92 322 aa13.93□□□□□ -0.18
CACNB1-206ENST00000539338 OSTF1Q92882 214 aa13.93□□□□□ -0.18
CACNB1-206ENST00000539338 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.93□□□□□ -0.18
CACNB1-206ENST00000539338 SEC14L4Q9UDX3 406 aa13.93□□□□□ -0.18
CACNB1-206ENST00000539338 ADAMTS5Q9UNA0 930 aa13.93□□□□□ -0.18
CACNB1-206ENST00000539338 N4BP2Q86UW6 1770 aaPredicted RBP13.93□□□□□ -0.18
CACNB1-206ENST00000539338 MYH7BA7E2Y1 1941 aa13.93□□□□□ -0.18
CACNB1-206ENST00000539338 C5orf51A6NDU8 294 aa13.93□□□□□ -0.18
CACNB1-206ENST00000539338 A8MU76 341 aa13.93□□□□□ -0.18
CACNB1-206ENST00000539338 TSPAN4O14817 238 aa13.93□□□□□ -0.18
CACNB1-206ENST00000539338 SMAD9O15198 467 aaKnown RBP13.93□□□□□ -0.18
CACNB1-206ENST00000539338 SLITRK5O94991 958 aa13.93□□□□□ -0.18
CACNB1-206ENST00000539338 ZNF20P17024 532 aa13.93□□□□□ -0.18
CACNB1-206ENST00000539338 CLDN8P56748 225 aa13.93□□□□□ -0.18
CACNB1-206ENST00000539338 NRG3P56975 720 aa13.93□□□□□ -0.18
CACNB1-206ENST00000539338 ZXDBP98169 803 aa13.93□□□□□ -0.18
CACNB1-206ENST00000539338 C6orf183Q5T699 404 aa13.93□□□□□ -0.18
CACNB1-206ENST00000539338 ERN2Q76MJ5 926 aaKnown RBP13.93□□□□□ -0.18
CACNB1-206ENST00000539338 GNPDA2Q8TDQ7 276 aa13.93□□□□□ -0.18
CACNB1-206ENST00000539338 TUBA1CQ9BQE3 449 aa13.93□□□□□ -0.18
CACNB1-206ENST00000539338 NLGN3Q9NZ94 848 aa13.93□□□□□ -0.18
CACNB1-206ENST00000539338 MITFO75030 526 aaPredicted RBP13.92□□□□□ -0.18
CACNB1-206ENST00000539338 SCD5Q86SK9 330 aa13.92□□□□□ -0.18
CACNB1-206ENST00000539338 OR5M3Q8NGP4 307 aa13.92□□□□□ -0.18
CACNB1-206ENST00000539338 HUS1BQ8NHY5 278 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms