RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 SMARCE1Q969G3 411 aa5.03□□□□□ -1.6
CLIP1-207ENST00000536634 TAAR8Q969N4 342 aa5.03□□□□□ -1.6
CLIP1-207ENST00000536634 TMEM68Q96MH6 324 aa5.03□□□□□ -1.6
CLIP1-207ENST00000536634 SPAG5Q96R06 1193 aa5.03□□□□□ -1.6
CLIP1-207ENST00000536634 EPYCQ99645 322 aa5.03□□□□□ -1.6
CLIP1-207ENST00000536634 PANK2Q9BZ23 570 aa5.03□□□□□ -1.6
CLIP1-207ENST00000536634 XPO7Q9UIA9 1087 aaKnown RBP5.03□□□□□ -1.6
CLIP1-207ENST00000536634 ANAPC2Q9UJX6 822 aa5.03□□□□□ -1.6
CLIP1-207ENST00000536634 FBXO2Q9UK22 296 aaPredicted RBP5.03□□□□□ -1.6
CLIP1-207ENST00000536634 ACSL5Q9ULC5 683 aa5.03□□□□□ -1.6
CLIP1-207ENST00000536634 DOCK7Q96N67 2140 aa5.03□□□□□ -1.6
CLIP1-207ENST00000536634 ANKHD1Q8IWZ3 2542 aaKnown RBP5.02□□□□□ -1.61
CLIP1-207ENST00000536634 LRP4O75096 1905 aa5.02□□□□□ -1.61
CLIP1-207ENST00000536634 SPTY2D1-AS1A0A0U1RR47 76 aa5.02□□□□□ -1.61
CLIP1-207ENST00000536634 A0A1W2PS18 150 aa5.02□□□□□ -1.61
CLIP1-207ENST00000536634 P2RY10O00398 339 aa5.02□□□□□ -1.61
CLIP1-207ENST00000536634 LUC7L3O95232 432 aaKnown RBP5.02□□□□□ -1.61
CLIP1-207ENST00000536634 HLA-DRAP01903 254 aa5.02□□□□□ -1.61
CLIP1-207ENST00000536634 CLEC3BP05452 202 aa5.02□□□□□ -1.61
CLIP1-207ENST00000536634 P4HA1P13674 534 aa5.02□□□□□ -1.61
CLIP1-207ENST00000536634 PDGFRAP16234 1089 aa5.02□□□□□ -1.61
CLIP1-207ENST00000536634 NR1D1P20393 614 aa5.02□□□□□ -1.61
CLIP1-207ENST00000536634 BSGP35613 385 aa5.02□□□□□ -1.61
CLIP1-207ENST00000536634 DCTP40126 519 aa5.02□□□□□ -1.61
CLIP1-207ENST00000536634 APOBEC1P41238 236 aaKnown RBP5.02□□□□□ -1.61
CLIP1-207ENST00000536634 PIK3CAP42336 1068 aa5.02□□□□□ -1.61
CLIP1-207ENST00000536634 CLDN20P56880 219 aa5.02□□□□□ -1.61
CLIP1-207ENST00000536634 CCL7P80098 99 aa5.02□□□□□ -1.61
CLIP1-207ENST00000536634 ADIGQ0VDE8 80 aa5.02□□□□□ -1.61
CLIP1-207ENST00000536634 CSTF3Q12996 717 aaKnown RBP5.02□□□□□ -1.61
CLIP1-207ENST00000536634 EIF3IQ13347 325 aaKnown RBP5.02□□□□□ -1.61
CLIP1-207ENST00000536634 C1orf61Q13536 156 aa5.02□□□□□ -1.61
CLIP1-207ENST00000536634 SGSM1Q2NKQ1 1148 aa5.02□□□□□ -1.61
CLIP1-207ENST00000536634 MS4A13Q5J8X5 152 aa5.02□□□□□ -1.61
CLIP1-207ENST00000536634 PARGQ86W56 976 aa5.02□□□□□ -1.61
CLIP1-207ENST00000536634 C12orf56Q8IXR9 622 aa5.02□□□□□ -1.61
CLIP1-207ENST00000536634 CCDC65Q8IXS2 484 aa5.02□□□□□ -1.61
CLIP1-207ENST00000536634 SLC4A11Q8NBS3 891 aa5.02□□□□□ -1.61
CLIP1-207ENST00000536634 RNF139Q8WU17 664 aa5.02□□□□□ -1.61
CLIP1-207ENST00000536634 OR8D1Q8WZ84 308 aa5.02□□□□□ -1.61
CLIP1-207ENST00000536634 NAT6Q93015 286 aa5.02□□□□□ -1.61
CLIP1-207ENST00000536634 FAM149B1Q96BN6 582 aa5.02□□□□□ -1.61
CLIP1-207ENST00000536634 HARBI1Q96MB7 349 aa5.02□□□□□ -1.61
CLIP1-207ENST00000536634 QRFPRQ96P65 431 aa5.02□□□□□ -1.61
CLIP1-207ENST00000536634 UHRF2Q96PU4 802 aa5.02□□□□□ -1.61
CLIP1-207ENST00000536634 IL12RB2Q99665 862 aa5.02□□□□□ -1.61
CLIP1-207ENST00000536634 LRRC61Q9BV99 259 aa5.02□□□□□ -1.61
CLIP1-207ENST00000536634 RANGRFQ9HD47 186 aaPredicted RBP5.02□□□□□ -1.61
CLIP1-207ENST00000536634 OLA1Q9NTK5 396 aaKnown RBP5.02□□□□□ -1.61
CLIP1-207ENST00000536634 SEPT10Q9P0V9 454 aa5.02□□□□□ -1.61
CLIP1-207ENST00000536634 DLGAP4Q9Y2H0 992 aa5.02□□□□□ -1.61
CLIP1-207ENST00000536634 KLHL20Q9Y2M5 609 aa5.02□□□□□ -1.61
CLIP1-207ENST00000536634 CLIC4Q9Y696 253 aa5.02□□□□□ -1.61
CLIP1-207ENST00000536634 CSNK1G3Q9Y6M4 447 aa5.02□□□□□ -1.61
CLIP1-207ENST00000536634 ZNF106Q9H2Y7 1883 aaKnown RBP5.02□□□□□ -1.61
CLIP1-207ENST00000536634 MED13LQ71F56 2210 aa5.01□□□□□ -1.61
CLIP1-207ENST00000536634 LMO7DNF2Z398 122 aa5.01□□□□□ -1.61
CLIP1-207ENST00000536634 H3BQV1 296 aa5.01□□□□□ -1.61
CLIP1-207ENST00000536634 K7EM74 188 aa5.01□□□□□ -1.61
CLIP1-207ENST00000536634 M0QZ24 198 aa5.01□□□□□ -1.61
CLIP1-207ENST00000536634 DUX1O43812 170 aa5.01□□□□□ -1.61
CLIP1-207ENST00000536634 CLDN1O95832 211 aa5.01□□□□□ -1.61
CLIP1-207ENST00000536634 MOCS2O96007 188 aaPredicted RBP5.01□□□□□ -1.61
CLIP1-207ENST00000536634 PAK4O96013 591 aaPredicted RBP5.01□□□□□ -1.61
CLIP1-207ENST00000536634 ATP1A1P05023 1023 aaKnown RBP5.01□□□□□ -1.61
CLIP1-207ENST00000536634 RPLP0P05388 317 aaKnown RBP5.01□□□□□ -1.61
CLIP1-207ENST00000536634 LIFP15018 202 aa5.01□□□□□ -1.61
CLIP1-207ENST00000536634 TCEA1P23193 301 aaKnown RBP5.01□□□□□ -1.61
CLIP1-207ENST00000536634 ELAVL4P26378 380 aaKnown RBP5.01□□□□□ -1.61
CLIP1-207ENST00000536634 CASP1P29466 404 aa5.01□□□□□ -1.61
CLIP1-207ENST00000536634 KRT9P35527 623 aa5.01□□□□□ -1.61
CLIP1-207ENST00000536634 FMO5P49326 533 aa5.01□□□□□ -1.61
CLIP1-207ENST00000536634 AP3M2P53677 418 aa5.01□□□□□ -1.61
CLIP1-207ENST00000536634 DAOAP59103 153 aa5.01□□□□□ -1.61
CLIP1-207ENST00000536634 RUNX1T1Q06455 604 aa5.01□□□□□ -1.61
CLIP1-207ENST00000536634 ZFP36L1Q07352 338 aaKnown RBP5.01□□□□□ -1.61
CLIP1-207ENST00000536634 GTF2H2Q13888 395 aa5.01□□□□□ -1.61
CLIP1-207ENST00000536634 PDE1CQ14123 709 aaPredicted RBP5.01□□□□□ -1.61
CLIP1-207ENST00000536634 GOLGA7BQ2TAP0 167 aa5.01□□□□□ -1.61
CLIP1-207ENST00000536634 FAM46CQ5VWP2 391 aa5.01□□□□□ -1.61
CLIP1-207ENST00000536634 C18orf63Q68DL7 685 aa5.01□□□□□ -1.61
CLIP1-207ENST00000536634 ARHGAP17Q68EM7 881 aa5.01□□□□□ -1.61
CLIP1-207ENST00000536634 GTF2H2CQ6P1K8 395 aa5.01□□□□□ -1.61
CLIP1-207ENST00000536634 CCDC73Q6ZRK6 1079 aa5.01□□□□□ -1.61
CLIP1-207ENST00000536634 STXBP4Q6ZWJ1 553 aa5.01□□□□□ -1.61
CLIP1-207ENST00000536634 PDILTQ8N807 584 aa5.01□□□□□ -1.61
CLIP1-207ENST00000536634 ZNF557Q8N988 423 aaPredicted RBP5.01□□□□□ -1.61
CLIP1-207ENST00000536634 ANKRD52Q8NB46 1076 aa5.01□□□□□ -1.61
CLIP1-207ENST00000536634 OR52K2Q8NGK3 314 aa5.01□□□□□ -1.61
CLIP1-207ENST00000536634 C9orf43Q8TAL5 461 aaPredicted RBP5.01□□□□□ -1.61
CLIP1-207ENST00000536634 TAS1R2Q8TE23 839 aa5.01□□□□□ -1.61
CLIP1-207ENST00000536634 SSC4DQ8WTU2 575 aa5.01□□□□□ -1.61
CLIP1-207ENST00000536634 SLC44A1Q8WWI5 657 aa5.01□□□□□ -1.61
CLIP1-207ENST00000536634 TAF4BQ92750 862 aa5.01□□□□□ -1.61
CLIP1-207ENST00000536634 ARHGEF26Q96DR7 871 aa5.01□□□□□ -1.61
CLIP1-207ENST00000536634 HES6Q96HZ4 224 aa5.01□□□□□ -1.61
CLIP1-207ENST00000536634 UBXN6Q9BZV1 441 aa5.01□□□□□ -1.61
CLIP1-207ENST00000536634 STRADBQ9C0K7 418 aa5.01□□□□□ -1.61
CLIP1-207ENST00000536634 PDCL3Q9H2J4 239 aa5.01□□□□□ -1.61
CLIP1-207ENST00000536634 CYP3A43Q9HB55 503 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms