RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 SOX11P35716 441 aa21.27■■□□□ 1
SFSWAP-204ENST00000535399 AP2B1P63010 937 aa21.27■■□□□ 1
SFSWAP-204ENST00000535399 ID2Q02363 134 aa21.27■■□□□ 1
SFSWAP-204ENST00000535399 C19orf57Q0VDD7 668 aa21.27■■□□□ 1
SFSWAP-204ENST00000535399 ARL13AQ5H913 290 aaPredicted RBP21.27■■□□□ 1
SFSWAP-204ENST00000535399 IGFL2Q6UWQ7 119 aa21.27■■□□□ 1
SFSWAP-204ENST00000535399 IGFL3Q6UXB1 125 aa21.27■■□□□ 1
SFSWAP-204ENST00000535399 HPS6Q86YV9 775 aa21.27■■□□□ 1
SFSWAP-204ENST00000535399 C1orf52Q8N6N3 182 aaKnown RBP21.27■■□□□ 1
SFSWAP-204ENST00000535399 NFAM1Q8NET5 270 aaPredicted RBP21.27■■□□□ 1
SFSWAP-204ENST00000535399 TLCD1Q96CP7 247 aa21.27■■□□□ 1
SFSWAP-204ENST00000535399 PKNOX2Q96KN3 472 aa21.27■■□□□ 1
SFSWAP-204ENST00000535399 ALOXE3Q9BYJ1 711 aa21.27■■□□□ 1
SFSWAP-204ENST00000535399 MMP25Q9NPA2 562 aa21.27■■□□□ 1
SFSWAP-204ENST00000535399 MYOCOSA0A1B0GUC4 107 aa21.26■□□□□ 0.99
SFSWAP-204ENST00000535399 SYNDIG1LA6NDD5 238 aa21.26■□□□□ 0.99
SFSWAP-204ENST00000535399 FGF17O60258 216 aa21.26■□□□□ 0.99
SFSWAP-204ENST00000535399 ZWINTO95229 277 aa21.26■□□□□ 0.99
SFSWAP-204ENST00000535399 AIFM1O95831 613 aa21.26■□□□□ 0.99
SFSWAP-204ENST00000535399 NR2F6P10588 404 aa21.26■□□□□ 0.99
SFSWAP-204ENST00000535399 TLX1P31314 330 aaPredicted RBP21.26■□□□□ 0.99
SFSWAP-204ENST00000535399 ARRB2P32121 409 aa21.26■□□□□ 0.99
SFSWAP-204ENST00000535399 BUD31P41223 144 aaPredicted RBP21.26■□□□□ 0.99
SFSWAP-204ENST00000535399 IGLV3-21P80748 117 aaPredicted RBP21.26■□□□□ 0.99
SFSWAP-204ENST00000535399 KLRB1Q12918 225 aa21.26■□□□□ 0.99
SFSWAP-204ENST00000535399 CRB2Q5IJ48 1285 aa21.26■□□□□ 0.99
SFSWAP-204ENST00000535399 CCNYL2Q5T2Q4 361 aa21.26■□□□□ 0.99
SFSWAP-204ENST00000535399 CLEC6AQ6EIG7 209 aa21.26■□□□□ 0.99
SFSWAP-204ENST00000535399 ATG14Q6ZNE5 492 aa21.26■□□□□ 0.99
SFSWAP-204ENST00000535399 TRIM46Q7Z4K8 759 aa21.26■□□□□ 0.99
SFSWAP-204ENST00000535399 SIRT6Q8N6T7 355 aa21.26■□□□□ 0.99
SFSWAP-204ENST00000535399 RBMXL3Q8N7X1 1067 aaKnown RBP21.26■□□□□ 0.99
SFSWAP-204ENST00000535399 TANKQ92844 425 aa21.26■□□□□ 0.99
SFSWAP-204ENST00000535399 UCN3Q969E3 161 aa21.26■□□□□ 0.99
SFSWAP-204ENST00000535399 APIPQ96GX9 242 aa21.26■□□□□ 0.99
SFSWAP-204ENST00000535399 KCNK9Q9NPC2 374 aa21.26■□□□□ 0.99
SFSWAP-204ENST00000535399 PNO1Q9NRX1 252 aaKnown RBP21.26■□□□□ 0.99
SFSWAP-204ENST00000535399 TEX10Q9NXF1 929 aaPredicted RBP21.26■□□□□ 0.99
SFSWAP-204ENST00000535399 PTGFRNQ9P2B2 879 aa21.26■□□□□ 0.99
SFSWAP-204ENST00000535399 ARHGAP10A1A4S6 786 aa21.25■□□□□ 0.99
SFSWAP-204ENST00000535399 WASHC1A8K0Z3 465 aa21.25■□□□□ 0.99
SFSWAP-204ENST00000535399 AZIN1O14977 448 aa21.25■□□□□ 0.99
SFSWAP-204ENST00000535399 DPM1O60762 260 aa21.25■□□□□ 0.99
SFSWAP-204ENST00000535399 SERPINB5P36952 375 aa21.25■□□□□ 0.99
SFSWAP-204ENST00000535399 CD97P48960 835 aa21.25■□□□□ 0.99
SFSWAP-204ENST00000535399 STX4Q12846 297 aa21.25■□□□□ 0.99
SFSWAP-204ENST00000535399 SERTAD2Q14140 314 aa21.25■□□□□ 0.99
SFSWAP-204ENST00000535399 TERF2Q15554 542 aa21.25■□□□□ 0.99
SFSWAP-204ENST00000535399 CES4AQ5XG92 561 aa21.25■□□□□ 0.99
SFSWAP-204ENST00000535399 B3GNTL1Q67FW5 361 aaPredicted RBP21.25■□□□□ 0.99
SFSWAP-204ENST00000535399 ISLR2Q6UXK2 745 aa21.25■□□□□ 0.99
SFSWAP-204ENST00000535399 NUDCD3Q8IVD9 361 aa21.25■□□□□ 0.99
SFSWAP-204ENST00000535399 OR4N5Q8IXE1 308 aa21.25■□□□□ 0.99
SFSWAP-204ENST00000535399 TEX19Q8NA77 164 aa21.25■□□□□ 0.99
SFSWAP-204ENST00000535399 SREK1Q8WXA9 508 aaKnown RBP21.25■□□□□ 0.99
SFSWAP-204ENST00000535399 LMF1Q96S06 567 aa21.25■□□□□ 0.99
SFSWAP-204ENST00000535399 SCN2AQ99250 2005 aa21.25■□□□□ 0.99
SFSWAP-204ENST00000535399 ADAP2Q9NPF8 381 aa21.25■□□□□ 0.99
SFSWAP-204ENST00000535399 VTI1BQ9UEU0 232 aa21.25■□□□□ 0.99
SFSWAP-204ENST00000535399 DOCK10Q96BY6 2186 aa21.24■□□□□ 0.99
SFSWAP-204ENST00000535399 ZNF462Q96JM2 2506 aa21.24■□□□□ 0.99
SFSWAP-204ENST00000535399 WDR91A4D1P6 747 aa21.24■□□□□ 0.99
SFSWAP-204ENST00000535399 GOLGA6L10A6NI86 522 aa21.24■□□□□ 0.99
SFSWAP-204ENST00000535399 BIRC5O15392 142 aa21.24■□□□□ 0.99
SFSWAP-204ENST00000535399 SUV39H1O43463 412 aa21.24■□□□□ 0.99
SFSWAP-204ENST00000535399 MYO1DO94832 1006 aa21.24■□□□□ 0.99
SFSWAP-204ENST00000535399 MAPK12P53778 367 aa21.24■□□□□ 0.99
SFSWAP-204ENST00000535399 RAE1P78406 368 aaKnown RBP21.24■□□□□ 0.99
SFSWAP-204ENST00000535399 FOLH1Q04609 750 aa21.24■□□□□ 0.99
SFSWAP-204ENST00000535399 MFAP5Q13361 173 aa21.24■□□□□ 0.99
SFSWAP-204ENST00000535399 ELAVL1Q15717 326 aaKnown RBP21.24■□□□□ 0.99
SFSWAP-204ENST00000535399 NADK2Q4G0N4 442 aa21.24■□□□□ 0.99
SFSWAP-204ENST00000535399 COLEC12Q5KU26 742 aa21.24■□□□□ 0.99
SFSWAP-204ENST00000535399 KANK2Q63ZY3 851 aa21.24■□□□□ 0.99
SFSWAP-204ENST00000535399 H3F3CQ6NXT2 135 aa21.24■□□□□ 0.99
SFSWAP-204ENST00000535399 ELP5Q8TE02 316 aa21.24■□□□□ 0.99
SFSWAP-204ENST00000535399 C11orf24Q96F05 449 aaPredicted RBP21.24■□□□□ 0.99
SFSWAP-204ENST00000535399 KCNK13Q9HB14 408 aa21.24■□□□□ 0.99
SFSWAP-204ENST00000535399 EML4Q9HC35 981 aaKnown RBP21.24■□□□□ 0.99
SFSWAP-204ENST00000535399 ANAPC2Q9UJX6 822 aa21.24■□□□□ 0.99
SFSWAP-204ENST00000535399 PPIEQ9UNP9 301 aaKnown RBP21.24■□□□□ 0.99
SFSWAP-204ENST00000535399 CCL27Q9Y4X3 112 aa21.24■□□□□ 0.99
SFSWAP-204ENST00000535399 TNRC6AQ8NDV7 1962 aaKnown RBP21.24■□□□□ 0.99
SFSWAP-204ENST00000535399 GLOD5A6NK44 160 aa21.23■□□□□ 0.99
SFSWAP-204ENST00000535399 PGRMC2O15173 223 aa21.23■□□□□ 0.99
SFSWAP-204ENST00000535399 IFNA16P05015 189 aa21.23■□□□□ 0.99
SFSWAP-204ENST00000535399 FGF4P08620 206 aa21.23■□□□□ 0.99
SFSWAP-204ENST00000535399 MAGOHP61326 146 aaKnown RBP21.23■□□□□ 0.99
SFSWAP-204ENST00000535399 SPIN4Q56A73 249 aa21.23■□□□□ 0.99
SFSWAP-204ENST00000535399 NDUFAF5Q5TEU4 345 aa21.23■□□□□ 0.99
SFSWAP-204ENST00000535399 LINC00696Q6ZRV3 163 aa21.23■□□□□ 0.99
SFSWAP-204ENST00000535399 RNF165Q6ZSG1 346 aa21.23■□□□□ 0.99
SFSWAP-204ENST00000535399 KIF2BQ8N4N8 673 aa21.23■□□□□ 0.99
SFSWAP-204ENST00000535399 DNAJB14Q8TBM8 379 aa21.23■□□□□ 0.99
SFSWAP-204ENST00000535399 PTPMT1Q8WUK0 201 aaPredicted RBP21.23■□□□□ 0.99
SFSWAP-204ENST00000535399 TM9SF4Q92544 642 aa21.23■□□□□ 0.99
SFSWAP-204ENST00000535399 TM4SF18Q96CE8 201 aa21.23■□□□□ 0.99
SFSWAP-204ENST00000535399 MFRPQ9BY79 579 aa21.23■□□□□ 0.99
SFSWAP-204ENST00000535399 TUBB1Q9H4B7 451 aa21.23■□□□□ 0.99
SFSWAP-204ENST00000535399 WDR41Q9HAD4 459 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms