RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	DCLK3	Q9C098	648 aa		4.17	□□□□□ -1.74
ECHDC1-223	ENST00000534442	NOL11	Q9H8H0	719 aa	Known RBP	4.17	□□□□□ -1.74
ECHDC1-223	ENST00000534442	ZWILCH	Q9H900	591 aa		4.17	□□□□□ -1.74
ECHDC1-223	ENST00000534442	PSTPIP2	Q9H939	334 aa		4.17	□□□□□ -1.74
ECHDC1-223	ENST00000534442	CNOT10	Q9H9A5	744 aa	Known RBP	4.17	□□□□□ -1.74
ECHDC1-223	ENST00000534442	GRPEL1	Q9HAV7	217 aa		4.17	□□□□□ -1.74
ECHDC1-223	ENST00000534442	PRMT7	Q9NVM4	692 aa	Predicted RBP	4.17	□□□□□ -1.74
ECHDC1-223	ENST00000534442	DDX43	Q9NXZ2	648 aa	Known RBP	4.17	□□□□□ -1.74
ECHDC1-223	ENST00000534442	SLC39A1	Q9NY26	324 aa		4.17	□□□□□ -1.74
ECHDC1-223	ENST00000534442	GPR83	Q9NYM4	423 aa		4.17	□□□□□ -1.74
ECHDC1-223	ENST00000534442	DDX25	Q9UHL0	483 aa	Known RBP	4.17	□□□□□ -1.74
ECHDC1-223	ENST00000534442	MAD2L2	Q9UI95	211 aa		4.17	□□□□□ -1.74
ECHDC1-223	ENST00000534442	FBXL2	Q9UKC9	423 aa		4.17	□□□□□ -1.74
ECHDC1-223	ENST00000534442	NCKAP1	Q9Y2A7	1128 aa		4.17	□□□□□ -1.74
ECHDC1-223	ENST00000534442	KLHL20	Q9Y2M5	609 aa		4.17	□□□□□ -1.74
ECHDC1-223	ENST00000534442	ROS1	P08922	2347 aa		4.16	□□□□□ -1.74
ECHDC1-223	ENST00000534442		A0A0U1RQJ8	604 aa		4.16	□□□□□ -1.74
ECHDC1-223	ENST00000534442	FAM170A	A1A519	330 aa		4.16	□□□□□ -1.74
ECHDC1-223	ENST00000534442	DNAJC9-AS1	A6NH13	148 aa		4.16	□□□□□ -1.74
ECHDC1-223	ENST00000534442	C10orf142	B7Z368	130 aa		4.16	□□□□□ -1.74
ECHDC1-223	ENST00000534442	NEDD8-MDP1	E9PL57	170 aa		4.16	□□□□□ -1.74
ECHDC1-223	ENST00000534442	AQP9	O43315	295 aa		4.16	□□□□□ -1.74
ECHDC1-223	ENST00000534442	PRAMEF11	O60813	436 aa		4.16	□□□□□ -1.74
ECHDC1-223	ENST00000534442	LINGO3	P0C6S8	592 aa		4.16	□□□□□ -1.74
ECHDC1-223	ENST00000534442	SRC	P12931	536 aa		4.16	□□□□□ -1.74
ECHDC1-223	ENST00000534442	PFKFB1	P16118	471 aa		4.16	□□□□□ -1.74
ECHDC1-223	ENST00000534442	ARF4	P18085	180 aa	Predicted RBP	4.16	□□□□□ -1.74
ECHDC1-223	ENST00000534442	MUT	P22033	750 aa		4.16	□□□□□ -1.74
ECHDC1-223	ENST00000534442	GABRA5	P31644	462 aa		4.16	□□□□□ -1.74
ECHDC1-223	ENST00000534442	GP5	P40197	560 aa		4.16	□□□□□ -1.74
ECHDC1-223	ENST00000534442	MATR3	P43243	847 aa	Known RBP eCLIP	4.16	□□□□□ -1.74
ECHDC1-223	ENST00000534442	NR4A2	P43354	598 aa		4.16	□□□□□ -1.74
ECHDC1-223	ENST00000534442	NPY4R	P50391	375 aa		4.16	□□□□□ -1.74
ECHDC1-223	ENST00000534442	THOP1	P52888	689 aa		4.16	□□□□□ -1.74
ECHDC1-223	ENST00000534442	C21orf58	P58505	322 aa		4.16	□□□□□ -1.74
ECHDC1-223	ENST00000534442	RBP5	P82980	135 aa		4.16	□□□□□ -1.74
ECHDC1-223	ENST00000534442	CRYZ	Q08257	329 aa	Known RBP	4.16	□□□□□ -1.74
ECHDC1-223	ENST00000534442	DHX34	Q14147	1143 aa	Known RBP	4.16	□□□□□ -1.74
ECHDC1-223	ENST00000534442	OASL	Q15646	514 aa	Known RBP	4.16	□□□□□ -1.74
ECHDC1-223	ENST00000534442	ALX1	Q15699	326 aa		4.16	□□□□□ -1.74
ECHDC1-223	ENST00000534442	RAB6C	Q53S08	254 aa		4.16	□□□□□ -1.74
ECHDC1-223	ENST00000534442	TDRD12	Q587J7	1177 aa	Known RBP	4.16	□□□□□ -1.74
ECHDC1-223	ENST00000534442	ARMC4	Q5T2S8	1044 aa		4.16	□□□□□ -1.74
ECHDC1-223	ENST00000534442	LRCH2	Q5VUJ6	765 aa		4.16	□□□□□ -1.74
ECHDC1-223	ENST00000534442	ZDHHC20	Q5W0Z9	365 aa		4.16	□□□□□ -1.74
ECHDC1-223	ENST00000534442	FIGLA	Q6QHK4	219 aa		4.16	□□□□□ -1.74
ECHDC1-223	ENST00000534442	GFRAL	Q6UXV0	394 aa		4.16	□□□□□ -1.74
ECHDC1-223	ENST00000534442		Q75L30	129 aa		4.16	□□□□□ -1.74
ECHDC1-223	ENST00000534442	CENPV	Q7Z7K6	275 aa	Predicted RBP	4.16	□□□□□ -1.74
ECHDC1-223	ENST00000534442	PGBD5	Q8N414	524 aa		4.16	□□□□□ -1.74
ECHDC1-223	ENST00000534442		Q8N9G6	341 aa	Predicted RBP	4.16	□□□□□ -1.74
ECHDC1-223	ENST00000534442	UTP15	Q8TED0	518 aa	Known RBP	4.16	□□□□□ -1.74
ECHDC1-223	ENST00000534442	ASB5	Q8WWX0	329 aa		4.16	□□□□□ -1.74
ECHDC1-223	ENST00000534442	ATP6V1E2	Q96A05	226 aa		4.16	□□□□□ -1.74
ECHDC1-223	ENST00000534442	NXNL1	Q96CM4	212 aa		4.16	□□□□□ -1.74
ECHDC1-223	ENST00000534442	RAB3IP	Q96QF0	476 aa	Predicted RBP	4.16	□□□□□ -1.74
ECHDC1-223	ENST00000534442	MTERF1	Q99551	399 aa	Known RBP	4.16	□□□□□ -1.74
ECHDC1-223	ENST00000534442	DESI2	Q9BSY9	194 aa		4.16	□□□□□ -1.74
ECHDC1-223	ENST00000534442	BEX2	Q9BXY8	128 aa		4.16	□□□□□ -1.74
ECHDC1-223	ENST00000534442	RAB6C	Q9H0N0	254 aa		4.16	□□□□□ -1.74
ECHDC1-223	ENST00000534442	RBM38	Q9H0Z9	239 aa	Known RBP	4.16	□□□□□ -1.74
ECHDC1-223	ENST00000534442	RNF41	Q9H4P4	317 aa	Predicted RBP	4.16	□□□□□ -1.74
ECHDC1-223	ENST00000534442	PCDH9	Q9HC56	1237 aa		4.16	□□□□□ -1.74
ECHDC1-223	ENST00000534442	CHCHD3	Q9NX63	227 aa	Known RBP	4.16	□□□□□ -1.74
ECHDC1-223	ENST00000534442	FBXL12	Q9NXK8	326 aa		4.16	□□□□□ -1.74
ECHDC1-223	ENST00000534442	RCC2	Q9P258	522 aa	Known RBP	4.16	□□□□□ -1.74
ECHDC1-223	ENST00000534442	GTF3C4	Q9UKN8	822 aa		4.16	□□□□□ -1.74
ECHDC1-223	ENST00000534442	SNX9	Q9Y5X1	595 aa		4.16	□□□□□ -1.74
ECHDC1-223	ENST00000534442	CSNK1G3	Q9Y6M4	447 aa		4.16	□□□□□ -1.74
ECHDC1-223	ENST00000534442	ARID1A	O14497	2285 aa		4.15	□□□□□ -1.74
ECHDC1-223	ENST00000534442	MYH10	P35580	1976 aa		4.15	□□□□□ -1.74
ECHDC1-223	ENST00000534442		A0A1B0GUA9	196 aa		4.15	□□□□□ -1.75
ECHDC1-223	ENST00000534442	TMEM150B	A6NC51	233 aa		4.15	□□□□□ -1.75
ECHDC1-223	ENST00000534442	INO80B-WBP1	J3KQ70	363 aa		4.15	□□□□□ -1.75
ECHDC1-223	ENST00000534442	T	O15178	435 aa		4.15	□□□□□ -1.75
ECHDC1-223	ENST00000534442	B4GALT5	O43286	388 aa		4.15	□□□□□ -1.75
ECHDC1-223	ENST00000534442	ZBTB43	O43298	467 aa		4.15	□□□□□ -1.75
ECHDC1-223	ENST00000534442	LAT	O43561	262 aa		4.15	□□□□□ -1.75
ECHDC1-223	ENST00000534442	CYTH3	O43739	400 aa		4.15	□□□□□ -1.75
ECHDC1-223	ENST00000534442	CD5L	O43866	347 aa		4.15	□□□□□ -1.75
ECHDC1-223	ENST00000534442	CACNG3	O60359	315 aa		4.15	□□□□□ -1.75
ECHDC1-223	ENST00000534442	RNASEH1	O60930	286 aa	Known RBP	4.15	□□□□□ -1.75
ECHDC1-223	ENST00000534442	SERPINI2	O75830	405 aa		4.15	□□□□□ -1.75
ECHDC1-223	ENST00000534442	STK17B	O94768	372 aa		4.15	□□□□□ -1.75
ECHDC1-223	ENST00000534442	OAZ2	O95190	189 aa		4.15	□□□□□ -1.75
ECHDC1-223	ENST00000534442	TOMM40	O96008	361 aa		4.15	□□□□□ -1.75
ECHDC1-223	ENST00000534442	HOXD4	P09016	255 aa	Predicted RBP	4.15	□□□□□ -1.75
ECHDC1-223	ENST00000534442	IGHV4-30-4	P0DP06	118 aa		4.15	□□□□□ -1.75
ECHDC1-223	ENST00000534442	FDPS	P14324	419 aa	Known RBP	4.15	□□□□□ -1.75
ECHDC1-223	ENST00000534442	ERCC2	P18074	760 aa		4.15	□□□□□ -1.75
ECHDC1-223	ENST00000534442	ACHE	P22303	614 aa		4.15	□□□□□ -1.75
ECHDC1-223	ENST00000534442	MARCKS	P29966	332 aa	Predicted RBP	4.15	□□□□□ -1.75
ECHDC1-223	ENST00000534442	CORO1A	P31146	461 aa	Known RBP	4.15	□□□□□ -1.75
ECHDC1-223	ENST00000534442	MAT2A	P31153	395 aa	Known RBP	4.15	□□□□□ -1.75
ECHDC1-223	ENST00000534442	TLX1	P31314	330 aa	Predicted RBP	4.15	□□□□□ -1.75
ECHDC1-223	ENST00000534442	ARRB2	P32121	409 aa		4.15	□□□□□ -1.75
ECHDC1-223	ENST00000534442	TDGF1P3	P51864	188 aa		4.15	□□□□□ -1.75
ECHDC1-223	ENST00000534442	CD81	P60033	236 aa		4.15	□□□□□ -1.75
ECHDC1-223	ENST00000534442	LAMTOR4	Q0VGL1	99 aa		4.15	□□□□□ -1.75
ECHDC1-223	ENST00000534442	ZNF273	Q14593	569 aa		4.15	□□□□□ -1.75

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