RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 AIFM2Q9BRQ8 373 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 CCDC32Q9BV29 185 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 SORBS1Q9BX66 1292 aaKnown RBP11.04□□□□□ -0.64
USP35-207ENST00000530546 NUAK2Q9H093 628 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 NKX2-4Q9H2Z4 354 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 BRF2Q9HAW0 419 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 MBNL1Q9NR56 388 aaKnown RBP11.04□□□□□ -0.64
USP35-207ENST00000530546 GDE1Q9NZC3 331 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 CCDC59Q9P031 241 aaKnown RBP11.04□□□□□ -0.64
USP35-207ENST00000530546 PEX16Q9Y5Y5 336 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 HMX3A6NHT5 357 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 hCG_2039718K7EN88 272 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 HS6ST1O60243 411 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 TMCC2O75069 709 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 PAK4O96013 591 aaPredicted RBP11.04□□□□□ -0.64
USP35-207ENST00000530546 RETP07949 1114 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 ITGAMP11215 1152 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 HSD3B1P14060 373 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 CD36P16671 472 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 HSD3B2P26439 372 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 DRD3P35462 400 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 TGFBR2P37173 567 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 CLK1P49759 484 aaKnown RBP11.04□□□□□ -0.64
USP35-207ENST00000530546 DGCR6Q14129 220 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 FAM180BQ6P0A1 224 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 SPATC1Q76KD6 591 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 VTCN1Q7Z7D3 282 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 HDDC3Q8N4P3 179 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 DNAJC5GQ8N7S2 189 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 TFGQ92734 400 aaPredicted RBP11.04□□□□□ -0.64
USP35-207ENST00000530546 TMCO6Q96DC7 493 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 MYOCQ99972 504 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 TPT1P8Q9HAU6 139 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 ACOT13Q9NPJ3 140 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 FAM120CQ9NX05 1096 aaKnown RBP11.04□□□□□ -0.64
USP35-207ENST00000530546 TAS2R9Q9NYW1 312 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 EHD3Q9NZN3 535 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 SPASTQ9UBP0 616 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 ORC6Q9Y5N6 252 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 XIRP2A4UGR9 3374 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 MYO1GB0I1T2 1018 aa11.03□□□□□ -0.64
USP35-207ENST00000530546 XPNPEP2O43895 674 aa11.03□□□□□ -0.64
USP35-207ENST00000530546 VEGFDO43915 354 aa11.03□□□□□ -0.64
USP35-207ENST00000530546 PRMT3O60678 531 aa11.03□□□□□ -0.64
USP35-207ENST00000530546 KCNK5O95279 499 aa11.03□□□□□ -0.64
USP35-207ENST00000530546 KLK1P06870 262 aa11.03□□□□□ -0.64
USP35-207ENST00000530546 ACPPP15309 386 aa11.03□□□□□ -0.64
USP35-207ENST00000530546 NAGAP17050 411 aa11.03□□□□□ -0.64
USP35-207ENST00000530546 ITGA2P17301 1181 aa11.03□□□□□ -0.64
USP35-207ENST00000530546 IDSP22304 550 aa11.03□□□□□ -0.64
USP35-207ENST00000530546 ACADLP28330 430 aa11.03□□□□□ -0.64
USP35-207ENST00000530546 TIE1P35590 1138 aa11.03□□□□□ -0.64
USP35-207ENST00000530546 HTR2BP41595 481 aa11.03□□□□□ -0.64
USP35-207ENST00000530546 MAP2K4P45985 399 aa11.03□□□□□ -0.64
USP35-207ENST00000530546 CTAG1AP78358 180 aa11.03□□□□□ -0.64
USP35-207ENST00000530546 ZNF385BQ569K4 471 aa11.03□□□□□ -0.64
USP35-207ENST00000530546 SPIN4Q56A73 249 aa11.03□□□□□ -0.64
USP35-207ENST00000530546 PRAMEF14Q5SWL7 426 aa11.03□□□□□ -0.64
USP35-207ENST00000530546 PRAMEF13Q5VWM6 474 aa11.03□□□□□ -0.64
USP35-207ENST00000530546 NXPE4Q6UWF7 544 aa11.03□□□□□ -0.64
USP35-207ENST00000530546 ZDHHC21Q8IVQ6 265 aa11.03□□□□□ -0.64
USP35-207ENST00000530546 ZZZ3Q8IYH5 903 aa11.03□□□□□ -0.64
USP35-207ENST00000530546 OR8J2Q8NGG1 315 aa11.03□□□□□ -0.64
USP35-207ENST00000530546 OR4A15Q8NGL6 344 aa11.03□□□□□ -0.64
USP35-207ENST00000530546 OR5H6Q8NGV6 325 aa11.03□□□□□ -0.64
USP35-207ENST00000530546 MAL2Q969L2 176 aa11.03□□□□□ -0.64
USP35-207ENST00000530546 REPS1Q96D71 796 aa11.03□□□□□ -0.64
USP35-207ENST00000530546 HHIPQ96QV1 700 aa11.03□□□□□ -0.64
USP35-207ENST00000530546 MYADMQ96S97 322 aa11.03□□□□□ -0.64
USP35-207ENST00000530546 EFCAB11Q9BUY7 163 aa11.03□□□□□ -0.64
USP35-207ENST00000530546 SGPP1Q9BX95 441 aa11.03□□□□□ -0.64
USP35-207ENST00000530546 OSGEPL1Q9H4B0 414 aa11.03□□□□□ -0.64
USP35-207ENST00000530546 ITM2CQ9NQX7 267 aa11.03□□□□□ -0.64
USP35-207ENST00000530546 TOR4AQ9NXH8 423 aa11.03□□□□□ -0.64
USP35-207ENST00000530546 NUP50Q9UKX7 468 aa11.03□□□□□ -0.64
USP35-207ENST00000530546 C2orf16Q68DN1 1984 aa11.03□□□□□ -0.64
USP35-207ENST00000530546 BCKDKO14874 412 aa11.03□□□□□ -0.64
USP35-207ENST00000530546 SEMA3DO95025 777 aa11.03□□□□□ -0.64
USP35-207ENST00000530546 ASMTP46597 345 aa11.03□□□□□ -0.64
USP35-207ENST00000530546 TAS2R38P59533 333 aa11.03□□□□□ -0.64
USP35-207ENST00000530546 CDK3Q00526 305 aa11.03□□□□□ -0.64
USP35-207ENST00000530546 C2orf80Q0P641 193 aa11.03□□□□□ -0.64
USP35-207ENST00000530546 GAB1Q13480 694 aa11.03□□□□□ -0.64
USP35-207ENST00000530546 CAMK2GQ13555 558 aaPredicted RBP11.03□□□□□ -0.64
USP35-207ENST00000530546 TCEA2Q15560 299 aa11.03□□□□□ -0.64
USP35-207ENST00000530546 CST6Q15828 149 aa11.03□□□□□ -0.64
USP35-207ENST00000530546 VMACQ2NL98 169 aa11.03□□□□□ -0.64
USP35-207ENST00000530546 FAM46CQ5VWP2 391 aa11.03□□□□□ -0.64
USP35-207ENST00000530546 PARM1Q6UWI2 310 aa11.03□□□□□ -0.64
USP35-207ENST00000530546 ZNF517Q6ZMY9 492 aaPredicted RBP11.03□□□□□ -0.64
USP35-207ENST00000530546 MSANTD1Q6ZTZ1 278 aa11.03□□□□□ -0.64
USP35-207ENST00000530546 GLRX5Q86SX6 157 aa11.03□□□□□ -0.64
USP35-207ENST00000530546 RAB43Q86YS6 212 aa11.03□□□□□ -0.64
USP35-207ENST00000530546 ADHFE1Q8IWW8 467 aa11.03□□□□□ -0.64
USP35-207ENST00000530546 KLHDC8AQ8IYD2 350 aa11.03□□□□□ -0.64
USP35-207ENST00000530546 VPS37AQ8NEZ2 397 aa11.03□□□□□ -0.64
USP35-207ENST00000530546 SLC38A4Q969I6 547 aa11.03□□□□□ -0.64
USP35-207ENST00000530546 C11orf24Q96F05 449 aaPredicted RBP11.03□□□□□ -0.64
USP35-207ENST00000530546 TPD52L3Q96J77 140 aa11.03□□□□□ -0.64
USP35-207ENST00000530546 TTYH2Q9BSA4 534 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms