RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 CFAP73A6NFT4 308 aa5.23□□□□□ -1.57
PCF11-202ENST00000528336 HHLA1C9JL84 531 aa5.23□□□□□ -1.57
PCF11-202ENST00000528336 ZG16O60844 167 aa5.23□□□□□ -1.57
PCF11-202ENST00000528336 IDH1O75874 414 aaKnown RBP5.23□□□□□ -1.57
PCF11-202ENST00000528336 PIGNO95427 931 aa5.23□□□□□ -1.57
PCF11-202ENST00000528336 VIMP08670 466 aaKnown RBP5.23□□□□□ -1.57
PCF11-202ENST00000528336 DLATP10515 647 aaKnown RBP5.23□□□□□ -1.57
PCF11-202ENST00000528336 ALDH4A1P30038 563 aa5.23□□□□□ -1.57
PCF11-202ENST00000528336 CDC25CP30307 473 aa5.23□□□□□ -1.57
PCF11-202ENST00000528336 TIA1P31483 386 aaKnown RBP eCLIP5.23□□□□□ -1.57
PCF11-202ENST00000528336 SLC6A6P31641 620 aa5.23□□□□□ -1.57
PCF11-202ENST00000528336 RFC2P35250 354 aa5.23□□□□□ -1.57
PCF11-202ENST00000528336 OR1G1P47890 313 aa5.23□□□□□ -1.57
PCF11-202ENST00000528336 PDX1P52945 283 aa5.23□□□□□ -1.57
PCF11-202ENST00000528336 PRRX1P54821 245 aa5.23□□□□□ -1.57
PCF11-202ENST00000528336 PDZK1IP1Q13113 114 aa5.23□□□□□ -1.57
PCF11-202ENST00000528336 PLD1Q13393 1074 aa5.23□□□□□ -1.57
PCF11-202ENST00000528336 DOC2AQ14183 400 aa5.23□□□□□ -1.57
PCF11-202ENST00000528336 KARSQ15046 597 aaKnown RBP5.23□□□□□ -1.57
PCF11-202ENST00000528336 ARHGEF16Q5VV41 709 aa5.23□□□□□ -1.57
PCF11-202ENST00000528336 METTL11BQ5VVY1 283 aa5.23□□□□□ -1.57
PCF11-202ENST00000528336 RAET1GQ6H3X3 334 aa5.23□□□□□ -1.57
PCF11-202ENST00000528336 CES3Q6UWW8 571 aa5.23□□□□□ -1.57
PCF11-202ENST00000528336 SPATA24Q86W54 205 aa5.23□□□□□ -1.57
PCF11-202ENST00000528336 TMEM139Q8IV31 216 aa5.23□□□□□ -1.57
PCF11-202ENST00000528336 WDR49Q8IV35 697 aa5.23□□□□□ -1.57
PCF11-202ENST00000528336 PSTKQ8IV42 348 aaKnown RBP5.23□□□□□ -1.57
PCF11-202ENST00000528336 BATF2Q8N1L9 274 aa5.23□□□□□ -1.57
PCF11-202ENST00000528336 FAM184AQ8NB25 1140 aa5.23□□□□□ -1.57
PCF11-202ENST00000528336 UXS1Q8NBZ7 420 aa5.23□□□□□ -1.57
PCF11-202ENST00000528336 KBTBD8Q8NFY9 601 aa5.23□□□□□ -1.57
PCF11-202ENST00000528336 TRIM58Q8NG06 486 aa5.23□□□□□ -1.57
PCF11-202ENST00000528336 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.23□□□□□ -1.57
PCF11-202ENST00000528336 IRGQQ8WZA9 623 aa5.23□□□□□ -1.57
PCF11-202ENST00000528336 CCDC51Q96ER9 411 aa5.23□□□□□ -1.57
PCF11-202ENST00000528336 SFXN2Q96NB2 322 aa5.23□□□□□ -1.57
PCF11-202ENST00000528336 NECTIN4Q96NY8 510 aa5.23□□□□□ -1.57
PCF11-202ENST00000528336 NAP1L3Q99457 506 aaPredicted RBP5.23□□□□□ -1.57
PCF11-202ENST00000528336 ZBTB18Q99592 522 aa5.23□□□□□ -1.57
PCF11-202ENST00000528336 SSX3Q99909 188 aa5.23□□□□□ -1.57
PCF11-202ENST00000528336 XKR8Q9H6D3 395 aa5.23□□□□□ -1.57
PCF11-202ENST00000528336 AKIRIN1Q9H9L7 192 aaPredicted RBP5.23□□□□□ -1.57
PCF11-202ENST00000528336 RPRD1BQ9NQG5 326 aaKnown RBP5.23□□□□□ -1.57
PCF11-202ENST00000528336 QPCTLQ9NXS2 382 aa5.23□□□□□ -1.57
PCF11-202ENST00000528336 KCNN3Q9UGI6 736 aa5.23□□□□□ -1.57
PCF11-202ENST00000528336 ERRFI1Q9UJM3 462 aaPredicted RBP5.23□□□□□ -1.57
PCF11-202ENST00000528336 SPACA6W5XKT8 324 aa5.23□□□□□ -1.57
PCF11-202ENST00000528336 NCAPD2Q15021 1401 aa5.23□□□□□ -1.57
PCF11-202ENST00000528336 GLI3P10071 1580 aa5.22□□□□□ -1.57
PCF11-202ENST00000528336 A0A087WZY1 265 aa5.22□□□□□ -1.57
PCF11-202ENST00000528336 A0A0A6YYC8 382 aaPredicted RBP5.22□□□□□ -1.57
PCF11-202ENST00000528336 MFSD2BA6NFX1 497 aa5.22□□□□□ -1.57
PCF11-202ENST00000528336 TMEM221A6NGB7 291 aa5.22□□□□□ -1.57
PCF11-202ENST00000528336 YDJCA8MPS7 323 aa5.22□□□□□ -1.57
PCF11-202ENST00000528336 I3L1I5 382 aaPredicted RBP5.22□□□□□ -1.57
PCF11-202ENST00000528336 ZNF197O14709 1029 aa5.22□□□□□ -1.57
PCF11-202ENST00000528336 ST8SIA3O43173 380 aa5.22□□□□□ -1.57
PCF11-202ENST00000528336 CTAG2O75638 210 aa5.22□□□□□ -1.57
PCF11-202ENST00000528336 WDPCPO95876 746 aa5.22□□□□□ -1.57
PCF11-202ENST00000528336 GH1P01241 217 aa5.22□□□□□ -1.57
PCF11-202ENST00000528336 SMIM18P0DKX4 95 aa5.22□□□□□ -1.57
PCF11-202ENST00000528336 ITGA3P26006 1051 aa5.22□□□□□ -1.57
PCF11-202ENST00000528336 PSMA5P28066 241 aa5.22□□□□□ -1.57
PCF11-202ENST00000528336 OTX2P32243 289 aa5.22□□□□□ -1.57
PCF11-202ENST00000528336 CRKLP46109 303 aaKnown RBP5.22□□□□□ -1.57
PCF11-202ENST00000528336 ZNF75DP51815 510 aa5.22□□□□□ -1.57
PCF11-202ENST00000528336 HNRNPKP61978 463 aaKnown RBP eCLIP5.22□□□□□ -1.57
PCF11-202ENST00000528336 HSPB3Q12988 150 aa5.22□□□□□ -1.57
PCF11-202ENST00000528336 CDO1Q16878 200 aa5.22□□□□□ -1.57
PCF11-202ENST00000528336 CCDC57Q2TAC2 916 aa5.22□□□□□ -1.57
PCF11-202ENST00000528336 KCTD21Q4G0X4 260 aa5.22□□□□□ -1.57
PCF11-202ENST00000528336 C11orf57Q6ZUT1 292 aaPredicted RBP5.22□□□□□ -1.57
PCF11-202ENST00000528336 TMPRSS11BQ86T26 416 aa5.22□□□□□ -1.57
PCF11-202ENST00000528336 APLFQ8IW19 511 aaPredicted RBP5.22□□□□□ -1.57
PCF11-202ENST00000528336 SERPINA12Q8IW75 414 aa5.22□□□□□ -1.57
PCF11-202ENST00000528336 MFN1Q8IWA4 741 aa5.22□□□□□ -1.57
PCF11-202ENST00000528336 MYOCDQ8IZQ8 938 aa5.22□□□□□ -1.57
PCF11-202ENST00000528336 RASGEF1AQ8N9B8 481 aa5.22□□□□□ -1.57
PCF11-202ENST00000528336 BBOF1Q8ND07 529 aa5.22□□□□□ -1.57
PCF11-202ENST00000528336 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.22□□□□□ -1.57
PCF11-202ENST00000528336 EXT2Q93063 718 aa5.22□□□□□ -1.57
PCF11-202ENST00000528336 TPD52L3Q96J77 140 aa5.22□□□□□ -1.57
PCF11-202ENST00000528336 NSMCE2Q96MF7 247 aa5.22□□□□□ -1.57
PCF11-202ENST00000528336 PRICKLE1Q96MT3 831 aaPredicted RBP5.22□□□□□ -1.57
PCF11-202ENST00000528336 ZNF558Q96NG5 402 aa5.22□□□□□ -1.57
PCF11-202ENST00000528336 USP28Q96RU2 1077 aa5.22□□□□□ -1.57
PCF11-202ENST00000528336 CCDC94Q9BW85 323 aaPredicted RBP5.22□□□□□ -1.57
PCF11-202ENST00000528336 NOL11Q9H8H0 719 aaKnown RBP5.22□□□□□ -1.57
PCF11-202ENST00000528336 CNOT10Q9H9A5 744 aaKnown RBP5.22□□□□□ -1.57
PCF11-202ENST00000528336 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.22□□□□□ -1.57
PCF11-202ENST00000528336 RAB20Q9NX57 234 aa5.22□□□□□ -1.57
PCF11-202ENST00000528336 SLC24A2Q9UI40 661 aa5.22□□□□□ -1.57
PCF11-202ENST00000528336 PADI2Q9Y2J8 665 aa5.22□□□□□ -1.57
PCF11-202ENST00000528336 DISP2A7MBM2 1401 aa5.22□□□□□ -1.57
PCF11-202ENST00000528336 RGS12O14924 1447 aa5.22□□□□□ -1.57
PCF11-202ENST00000528336 FAM208AQ9UK61 1670 aaKnown RBP5.21□□□□□ -1.57
PCF11-202ENST00000528336 PLEKHG2Q9H7P9 1386 aa5.21□□□□□ -1.58
PCF11-202ENST00000528336 LOC100653049A0A140TA62 436 aa5.21□□□□□ -1.58
PCF11-202ENST00000528336 ARHGAP42A6NI28 874 aa5.21□□□□□ -1.58
PCF11-202ENST00000528336 H0Y8G0 127 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms