RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 TCP11X1B4DZS4 312 aa9.21□□□□□ -0.94
TOPBP1-209ENST00000513818 GOLGA8NF8WBI6 632 aa9.21□□□□□ -0.94
TOPBP1-209ENST00000513818 K7ENP7 123 aa9.21□□□□□ -0.94
TOPBP1-209ENST00000513818 CYR61O00622 381 aa9.21□□□□□ -0.94
TOPBP1-209ENST00000513818 SOCS6O14544 535 aa9.21□□□□□ -0.94
TOPBP1-209ENST00000513818 LSM1O15116 133 aaKnown RBP9.21□□□□□ -0.94
TOPBP1-209ENST00000513818 RGS14O43566 566 aa9.21□□□□□ -0.94
TOPBP1-209ENST00000513818 FGF17O60258 216 aa9.21□□□□□ -0.94
TOPBP1-209ENST00000513818 SEC22BO75396 215 aa9.21□□□□□ -0.94
TOPBP1-209ENST00000513818 DNAJB5O75953 348 aa9.21□□□□□ -0.94
TOPBP1-209ENST00000513818 SEC24DO94855 1032 aaPredicted RBP9.21□□□□□ -0.94
TOPBP1-209ENST00000513818 CELA2AP08217 269 aa9.21□□□□□ -0.94
TOPBP1-209ENST00000513818 IL3P08700 152 aa9.21□□□□□ -0.94
TOPBP1-209ENST00000513818 C8orf89P0DMQ9 161 aa9.21□□□□□ -0.94
TOPBP1-209ENST00000513818 NR2F6P10588 404 aa9.21□□□□□ -0.94
TOPBP1-209ENST00000513818 TACR1P25103 407 aa9.21□□□□□ -0.94
TOPBP1-209ENST00000513818 ALDH9A1P49189 494 aa9.21□□□□□ -0.94
TOPBP1-209ENST00000513818 HK2P52789 917 aa9.21□□□□□ -0.94
TOPBP1-209ENST00000513818 GYS2P54840 703 aa9.21□□□□□ -0.94
TOPBP1-209ENST00000513818 MC1RQ01726 317 aa9.21□□□□□ -0.94
TOPBP1-209ENST00000513818 SLC13A2Q13183 592 aa9.21□□□□□ -0.94
TOPBP1-209ENST00000513818 UGT8Q16880 541 aa9.21□□□□□ -0.94
TOPBP1-209ENST00000513818 TUBB8Q3ZCM7 444 aa9.21□□□□□ -0.94
TOPBP1-209ENST00000513818 RFTN2Q52LD8 501 aaPredicted RBP9.21□□□□□ -0.94
TOPBP1-209ENST00000513818 SPIN4Q56A73 249 aa9.21□□□□□ -0.94
TOPBP1-209ENST00000513818 NIPAL1Q6NVV3 410 aa9.21□□□□□ -0.94
TOPBP1-209ENST00000513818 INO80CQ6PI98 192 aaPredicted RBP9.21□□□□□ -0.94
TOPBP1-209ENST00000513818 PAGE2Q7Z2X7 111 aa9.21□□□□□ -0.94
TOPBP1-209ENST00000513818 GPR180Q86V85 440 aa9.21□□□□□ -0.94
TOPBP1-209ENST00000513818 RAB43Q86YS6 212 aa9.21□□□□□ -0.94
TOPBP1-209ENST00000513818 WDR75Q8IWA0 830 aaKnown RBP9.21□□□□□ -0.94
TOPBP1-209ENST00000513818 DEPDC4Q8N2C3 294 aa9.21□□□□□ -0.94
TOPBP1-209ENST00000513818 C16orf78Q8WTQ4 265 aa9.21□□□□□ -0.94
TOPBP1-209ENST00000513818 TUBGCP3Q96CW5 907 aa9.21□□□□□ -0.94
TOPBP1-209ENST00000513818 MAGEB18Q96M61 343 aa9.21□□□□□ -0.94
TOPBP1-209ENST00000513818 PTCHD1Q96NR3 888 aa9.21□□□□□ -0.94
TOPBP1-209ENST00000513818 OR1F2PQ96R84 312 aa9.21□□□□□ -0.94
TOPBP1-209ENST00000513818 EFHD1Q9BUP0 239 aa9.21□□□□□ -0.94
TOPBP1-209ENST00000513818 WDR55Q9H6Y2 383 aaPredicted RBP9.21□□□□□ -0.94
TOPBP1-209ENST00000513818 LYRM4Q9HD34 91 aa9.21□□□□□ -0.94
TOPBP1-209ENST00000513818 NMRK1Q9NWW6 199 aa9.21□□□□□ -0.94
TOPBP1-209ENST00000513818 C1orf109Q9NX04 203 aa9.21□□□□□ -0.94
TOPBP1-209ENST00000513818 LYARQ9NX58 379 aaKnown RBP9.21□□□□□ -0.94
TOPBP1-209ENST00000513818 PSD3Q9NYI0 1048 aa9.21□□□□□ -0.94
TOPBP1-209ENST00000513818 HEY2Q9UBP5 337 aa9.21□□□□□ -0.94
TOPBP1-209ENST00000513818 PHF11Q9UIL8 331 aa9.21□□□□□ -0.94
TOPBP1-209ENST00000513818 HAO1Q9UJM8 370 aa9.21□□□□□ -0.94
TOPBP1-209ENST00000513818 FBXL4Q9UKA2 621 aa9.21□□□□□ -0.94
TOPBP1-209ENST00000513818 MAN2B2Q9Y2E5 1009 aa9.21□□□□□ -0.94
TOPBP1-209ENST00000513818 CLDN16Q9Y5I7 305 aa9.21□□□□□ -0.94
TOPBP1-209ENST00000513818 SDHDO14521 159 aa9.2□□□□□ -0.94
TOPBP1-209ENST00000513818 KLF11O14901 512 aa9.2□□□□□ -0.94
TOPBP1-209ENST00000513818 PRMT3O60678 531 aa9.2□□□□□ -0.94
TOPBP1-209ENST00000513818 LRATO95237 230 aa9.2□□□□□ -0.94
TOPBP1-209ENST00000513818 ANXA4P09525 319 aaPredicted RBP9.2□□□□□ -0.94
TOPBP1-209ENST00000513818 COX6A1P12074 109 aa9.2□□□□□ -0.94
TOPBP1-209ENST00000513818 ACPPP15309 386 aa9.2□□□□□ -0.94
TOPBP1-209ENST00000513818 SDC1P18827 310 aa9.2□□□□□ -0.94
TOPBP1-209ENST00000513818 JAK1P23458 1154 aa9.2□□□□□ -0.94
TOPBP1-209ENST00000513818 MMP11P24347 488 aa9.2□□□□□ -0.94
TOPBP1-209ENST00000513818 BUD31P41223 144 aaPredicted RBP9.2□□□□□ -0.94
TOPBP1-209ENST00000513818 TSFMP43897 325 aaKnown RBP9.2□□□□□ -0.94
TOPBP1-209ENST00000513818 UCNP55089 124 aa9.2□□□□□ -0.94
TOPBP1-209ENST00000513818 TAS2R50P59544 299 aa9.2□□□□□ -0.94
TOPBP1-209ENST00000513818 FOLH1Q04609 750 aa9.2□□□□□ -0.94
TOPBP1-209ENST00000513818 ZNF33BQ06732 778 aa9.2□□□□□ -0.94
TOPBP1-209ENST00000513818 RAPSNQ13702 412 aa9.2□□□□□ -0.94
TOPBP1-209ENST00000513818 KIAA0040Q15053 153 aa9.2□□□□□ -0.94
TOPBP1-209ENST00000513818 ZNF750Q32MQ0 723 aa9.2□□□□□ -0.94
TOPBP1-209ENST00000513818 SLC9B1Q4ZJI4 515 aa9.2□□□□□ -0.94
TOPBP1-209ENST00000513818 NDUFAF5Q5TEU4 345 aa9.2□□□□□ -0.94
TOPBP1-209ENST00000513818 ANKRD26P1Q6NSI1 321 aa9.2□□□□□ -0.94
TOPBP1-209ENST00000513818 NOXRED1Q6NXP6 359 aa9.2□□□□□ -0.94
TOPBP1-209ENST00000513818 KIRREL2Q6UWL6 708 aa9.2□□□□□ -0.94
TOPBP1-209ENST00000513818 QSOX2Q6ZRP7 698 aa9.2□□□□□ -0.94
TOPBP1-209ENST00000513818 RNF165Q6ZSG1 346 aa9.2□□□□□ -0.94
TOPBP1-209ENST00000513818 ANKRD37Q7Z713 158 aa9.2□□□□□ -0.94
TOPBP1-209ENST00000513818 CRLF3Q8IUI8 442 aa9.2□□□□□ -0.94
TOPBP1-209ENST00000513818 SCUBE1Q8IWY4 988 aa9.2□□□□□ -0.94
TOPBP1-209ENST00000513818 ARFGAP2Q8N6H7 521 aa9.2□□□□□ -0.94
TOPBP1-209ENST00000513818 FNDC5Q8NAU1 212 aa9.2□□□□□ -0.94
TOPBP1-209ENST00000513818 ZSCAN1Q8NBB4 408 aa9.2□□□□□ -0.94
TOPBP1-209ENST00000513818 FAM76AQ8TAV0 307 aa9.2□□□□□ -0.94
TOPBP1-209ENST00000513818 GFM2Q969S9 779 aaKnown RBP9.2□□□□□ -0.94
TOPBP1-209ENST00000513818 TM4SF18Q96CE8 201 aa9.2□□□□□ -0.94
TOPBP1-209ENST00000513818 C11orf24Q96F05 449 aaPredicted RBP9.2□□□□□ -0.94
TOPBP1-209ENST00000513818 EGLN2Q96KS0 407 aa9.2□□□□□ -0.94
TOPBP1-209ENST00000513818 MARK4Q96L34 752 aa9.2□□□□□ -0.94
TOPBP1-209ENST00000513818 TSSK3Q96PN8 268 aa9.2□□□□□ -0.94
TOPBP1-209ENST00000513818 TRIM55Q9BYV6 548 aa9.2□□□□□ -0.94
TOPBP1-209ENST00000513818 RPF2Q9H7B2 306 aaKnown RBP9.2□□□□□ -0.94
TOPBP1-209ENST00000513818 AKTIPQ9H8T0 292 aa9.2□□□□□ -0.94
TOPBP1-209ENST00000513818 ZNF160Q9HCG1 818 aa9.2□□□□□ -0.94
TOPBP1-209ENST00000513818 PRDM9Q9NQV7 894 aa9.2□□□□□ -0.94
TOPBP1-209ENST00000513818 SEMA3GQ9NS98 782 aa9.2□□□□□ -0.94
TOPBP1-209ENST00000513818 P4HTMQ9NXG6 502 aa9.2□□□□□ -0.94
TOPBP1-209ENST00000513818 MCM8Q9UJA3 840 aa9.2□□□□□ -0.94
TOPBP1-209ENST00000513818 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.2□□□□□ -0.94
TOPBP1-209ENST00000513818 SPACA6W5XKT8 324 aa9.2□□□□□ -0.94
TOPBP1-209ENST00000513818 IGKV3D-11A0A0A0MRZ8 115 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms