RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 SAV1Q9H4B6 383 aaPredicted RBP4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 MINDY3Q9H8M7 445 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 MCCC2Q9HCC0 563 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 BIN3Q9NQY0 253 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 PLCXD1Q9NUJ7 323 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 THUMPD1Q9NXG2 353 aaKnown RBP4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 MAT2BQ9NZL9 334 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 MPP6Q9NZW5 540 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 ABCD2Q9UBJ2 740 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 ADD3Q9UEY8 706 aaKnown RBP4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 HAO1Q9UJM8 370 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 ZNF229Q9UJW7 825 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 KCND3Q9UK17 655 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 RUVBL2Q9Y230 463 aaKnown RBP4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 ITGB4P16144 1822 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 PAPPAQ13219 1627 aa4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 A0A1B0GVM2 712 aa4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 TTC26A0AVF1 554 aa4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 MTMR11A4FU01 709 aa4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 RGSL1A5PLK6 1076 aa4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 KRT87PA6NCN2 255 aa4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 FAM90A8PA6NJQ4 464 aa4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 ZNF729A6NN14 1252 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 KBTBD13C9JR72 458 aa4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 H7C0S8 307 aa4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 SNAP23O00161 211 aa4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 NUPL2O15504 423 aaKnown RBP4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 CLDN3O15551 220 aa4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 DFNA5O60443 496 aa4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 EIF1BO60739 113 aaKnown RBP4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 CABYRO75952 493 aa4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 NOL4O94818 638 aa4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 RPP14O95059 124 aaKnown RBP4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 HSPA4LO95757 839 aa4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 FCER2P06734 321 aa4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 MMP3P08254 477 aa4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 STSP08842 583 aa4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 GNAO1P09471 354 aa4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 SBK2P0C263 348 aa4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 FAM90A13PP0C7W8 464 aa4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 FAM90A24PP0C7X0 464 aa4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 MCF2P10911 925 aa4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 RALAP11233 206 aa4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 PSKH1P11801 424 aa4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 MLNP12872 115 aa4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 ATP1A3P13637 1013 aa4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 CKMT2P17540 419 aa4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 TNNI1P19237 187 aa4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 HLA-DPA1P20036 260 aa4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 GALP22466 123 aa4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 PTBP1P26599 531 aaKnown RBP eCLIP4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 CALML3P27482 149 aa4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 DCKP27707 260 aa4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 EEF1DP29692 281 aaKnown RBP4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 ERP29P30040 261 aaKnown RBP4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 HOXA11P31270 313 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 HOXC8P31273 242 aa4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 PCGF2P35227 344 aa4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 RORAP35398 523 aa4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 PGM1P36871 562 aa4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 EIF1P41567 113 aaKnown RBP4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 CASP3P42574 277 aa4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 SLC1A3P43003 542 aa4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 OR1G1P47890 313 aa4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 VEGFCP49767 419 aa4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 BMXP51813 675 aa4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 NDST1P52848 882 aa4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 GBX2P52951 348 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 TMBIM6P55061 237 aa4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 MFAP3P55082 362 aa4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 DEFA1P59665 94 aa4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 DEFA3P59666 94 aa4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 YWHAGP61981 247 aaKnown RBP eCLIP4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 SKP1P63208 163 aa4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 DEFA6Q01524 100 aa4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 ZNF33AQ06730 810 aa4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 BNIP2Q12982 314 aa4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 MAPK7Q13164 816 aa4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 DMP1Q13316 513 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 IQCCQ4KMZ1 466 aa4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 ARL13AQ5H913 290 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 MARCH8Q5T0T0 291 aa4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 RIPPLY2Q5TAB7 128 aa4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 ATF7IP2Q5U623 682 aa4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 OTUD1Q5VV17 481 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 TYW3Q6IPR3 259 aaKnown RBP4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 CENPPQ6IPU0 288 aa4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 TTC33Q6PID6 262 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 RTL4Q6ZR62 310 aa4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 MSANTD1Q6ZTZ1 278 aa4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 FAM122BQ7Z309 247 aa4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 TPRA1Q86W33 373 aa4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 TRIM69Q86WT6 500 aa4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 ECHDC2Q86YB7 292 aa4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 TMC8Q8IU68 726 aa4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 SCN4BQ8IWT1 228 aa4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 KLHL7Q8IXQ5 586 aa4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 ENTHD1Q8IYW4 607 aa4.43□□□□□ -1.7
HMGB3P13-201ENST00000511263 NAGSQ8N159 534 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms