RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 PLOD1Q02809 727 aaPredicted RBP4.33□□□□□ -1.72
NUP54-206ENST00000508465 ACY1Q03154 408 aa4.33□□□□□ -1.72
NUP54-206ENST00000508465 TAP2Q03519 686 aa4.33□□□□□ -1.72
NUP54-206ENST00000508465 PIGFQ07326 219 aa4.33□□□□□ -1.72
NUP54-206ENST00000508465 PDIA2Q13087 525 aaKnown RBP4.33□□□□□ -1.72
NUP54-206ENST00000508465 TUBB2AQ13885 445 aa4.33□□□□□ -1.72
NUP54-206ENST00000508465 CRYMQ14894 314 aa4.33□□□□□ -1.72
NUP54-206ENST00000508465 FASTKD3Q14CZ7 662 aaKnown RBP4.33□□□□□ -1.72
NUP54-206ENST00000508465 MORF4L2Q15014 288 aa4.33□□□□□ -1.72
NUP54-206ENST00000508465 TMED2Q15363 201 aa4.33□□□□□ -1.72
NUP54-206ENST00000508465 TYSND1Q2T9J0 566 aa4.33□□□□□ -1.72
NUP54-206ENST00000508465 PTCHD3Q3KNS1 767 aa4.33□□□□□ -1.72
NUP54-206ENST00000508465 TOR2AQ5JU69 321 aa4.33□□□□□ -1.72
NUP54-206ENST00000508465 RBM20Q5T481 1227 aaKnown RBP4.33□□□□□ -1.72
NUP54-206ENST00000508465 MLIPQ5VWP3 458 aa4.33□□□□□ -1.72
NUP54-206ENST00000508465 FCRL6Q6DN72 434 aa4.33□□□□□ -1.72
NUP54-206ENST00000508465 HIBCHQ6NVY1 386 aaPredicted RBP4.33□□□□□ -1.72
NUP54-206ENST00000508465 TTC23LQ6PF05 361 aa4.33□□□□□ -1.72
NUP54-206ENST00000508465 FIGLAQ6QHK4 219 aa4.33□□□□□ -1.72
NUP54-206ENST00000508465 SUSD1Q6UWL2 747 aa4.33□□□□□ -1.72
NUP54-206ENST00000508465 UNC5DQ6UXZ4 953 aa4.33□□□□□ -1.72
NUP54-206ENST00000508465 CYHR1Q6ZMK1 362 aa4.33□□□□□ -1.72
NUP54-206ENST00000508465 PIWIL4Q7Z3Z4 852 aaKnown RBP4.33□□□□□ -1.72
NUP54-206ENST00000508465 PCGF5Q86SE9 256 aa4.33□□□□□ -1.72
NUP54-206ENST00000508465 KCNMB4Q86W47 210 aa4.33□□□□□ -1.72
NUP54-206ENST00000508465 LRRC6Q86X45 466 aa4.33□□□□□ -1.72
NUP54-206ENST00000508465 KMT5CQ86Y97 462 aa4.33□□□□□ -1.72
NUP54-206ENST00000508465 CPNE9Q8IYJ1 553 aa4.33□□□□□ -1.72
NUP54-206ENST00000508465 DNAJC22Q8N4W6 341 aa4.33□□□□□ -1.72
NUP54-206ENST00000508465 ESX1Q8N693 406 aa4.33□□□□□ -1.72
NUP54-206ENST00000508465 PPFIBP2Q8ND30 876 aa4.33□□□□□ -1.72
NUP54-206ENST00000508465 SPATA4Q8NEY3 305 aa4.33□□□□□ -1.72
NUP54-206ENST00000508465 SNRNP27Q8WVK2 155 aaKnown RBP4.33□□□□□ -1.72
NUP54-206ENST00000508465 N4BP2L2Q92802 583 aaPredicted RBP4.33□□□□□ -1.72
NUP54-206ENST00000508465 INPP5DQ92835 1189 aa4.33□□□□□ -1.72
NUP54-206ENST00000508465 PEX13Q92968 403 aa4.33□□□□□ -1.72
NUP54-206ENST00000508465 KIAA1143Q96AT1 154 aaPredicted RBP4.33□□□□□ -1.72
NUP54-206ENST00000508465 SLC45A3Q96JT2 553 aa4.33□□□□□ -1.72
NUP54-206ENST00000508465 PKP4Q99569 1192 aa4.33□□□□□ -1.72
NUP54-206ENST00000508465 GPR21Q99679 349 aa4.33□□□□□ -1.72
NUP54-206ENST00000508465 WDR83Q9BRX9 315 aaKnown RBP4.33□□□□□ -1.72
NUP54-206ENST00000508465 TUBB2BQ9BVA1 445 aa4.33□□□□□ -1.72
NUP54-206ENST00000508465 PITPNM3Q9BZ71 974 aa4.33□□□□□ -1.72
NUP54-206ENST00000508465 TWSG1Q9GZX9 223 aa4.33□□□□□ -1.72
NUP54-206ENST00000508465 ACTL8Q9H568 366 aa4.33□□□□□ -1.72
NUP54-206ENST00000508465 ACTR5Q9H9F9 607 aaPredicted RBP4.33□□□□□ -1.72
NUP54-206ENST00000508465 LHX9Q9NQ69 397 aa4.33□□□□□ -1.72
NUP54-206ENST00000508465 ZNF71Q9NQZ8 489 aaPredicted RBP4.33□□□□□ -1.72
NUP54-206ENST00000508465 INTS10Q9NVR2 710 aaKnown RBP4.33□□□□□ -1.72
NUP54-206ENST00000508465 IRAK4Q9NWZ3 460 aa4.33□□□□□ -1.72
NUP54-206ENST00000508465 ELOVL5Q9NYP7 299 aa4.33□□□□□ -1.72
NUP54-206ENST00000508465 OR6C2Q9NZP2 312 aa4.33□□□□□ -1.72
NUP54-206ENST00000508465 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.33□□□□□ -1.72
NUP54-206ENST00000508465 ZNF580Q9UK33 172 aa4.33□□□□□ -1.72
NUP54-206ENST00000508465 FARSAQ9Y285 508 aaKnown RBP4.33□□□□□ -1.72
NUP54-206ENST00000508465 MED16Q9Y2X0 877 aa4.33□□□□□ -1.72
NUP54-206ENST00000508465 DHRS7Q9Y394 339 aa4.33□□□□□ -1.72
NUP54-206ENST00000508465 ATRXP46100 2492 aa4.32□□□□□ -1.72
NUP54-206ENST00000508465 LOC105369274A0A096LPK9 316 aa4.32□□□□□ -1.72
NUP54-206ENST00000508465 LOC102723532A0A0G2JNH3 316 aa4.32□□□□□ -1.72
NUP54-206ENST00000508465 A0A0J9YY10 115 aa4.32□□□□□ -1.72
NUP54-206ENST00000508465 A0A1W2PPV9 198 aa4.32□□□□□ -1.72
NUP54-206ENST00000508465 A6NL46 340 aa4.32□□□□□ -1.72
NUP54-206ENST00000508465 H3BMM5 538 aa4.32□□□□□ -1.72
NUP54-206ENST00000508465 GFYI3L273 518 aa4.32□□□□□ -1.72
NUP54-206ENST00000508465 K7EM74 188 aa4.32□□□□□ -1.72
NUP54-206ENST00000508465 KPNA5O15131 536 aa4.32□□□□□ -1.72
NUP54-206ENST00000508465 PFDN6O15212 129 aa4.32□□□□□ -1.72
NUP54-206ENST00000508465 CTSVO60911 334 aa4.32□□□□□ -1.72
NUP54-206ENST00000508465 CREG1O75629 220 aa4.32□□□□□ -1.72
NUP54-206ENST00000508465 OR2B3O76000 313 aa4.32□□□□□ -1.72
NUP54-206ENST00000508465 SEC31AO94979 1220 aaKnown RBP4.32□□□□□ -1.72
NUP54-206ENST00000508465 SNUPNO95149 360 aaKnown RBP4.32□□□□□ -1.72
NUP54-206ENST00000508465 RPN2P04844 631 aa4.32□□□□□ -1.72
NUP54-206ENST00000508465 EIF2S1P05198 315 aaKnown RBP4.32□□□□□ -1.72
NUP54-206ENST00000508465 MYBL2P10244 700 aa4.32□□□□□ -1.72
NUP54-206ENST00000508465 PGAM1P18669 254 aa4.32□□□□□ -1.72
NUP54-206ENST00000508465 NR1D1P20393 614 aa4.32□□□□□ -1.72
NUP54-206ENST00000508465 OGNP20774 298 aaKnown RBP4.32□□□□□ -1.72
NUP54-206ENST00000508465 MAGP20916 626 aa4.32□□□□□ -1.72
NUP54-206ENST00000508465 DRD4P21917 467 aa4.32□□□□□ -1.72
NUP54-206ENST00000508465 PTPN4P29074 926 aa4.32□□□□□ -1.72
NUP54-206ENST00000508465 GABRA4P48169 554 aa4.32□□□□□ -1.72
NUP54-206ENST00000508465 RAB28P51157 221 aa4.32□□□□□ -1.72
NUP54-206ENST00000508465 PLTPP55058 493 aa4.32□□□□□ -1.72
NUP54-206ENST00000508465 ARL4CP56559 192 aa4.32□□□□□ -1.72
NUP54-206ENST00000508465 SCAND1P57086 179 aa4.32□□□□□ -1.72
NUP54-206ENST00000508465 VSX2P58304 361 aaPredicted RBP4.32□□□□□ -1.72
NUP54-206ENST00000508465 CTXN1P60606 82 aa4.32□□□□□ -1.72
NUP54-206ENST00000508465 RPS15P62841 145 aaKnown RBP4.32□□□□□ -1.72
NUP54-206ENST00000508465 CHAF1BQ13112 559 aa4.32□□□□□ -1.72
NUP54-206ENST00000508465 DNASE1L3Q13609 305 aa4.32□□□□□ -1.72
NUP54-206ENST00000508465 GBX1Q14549 363 aa4.32□□□□□ -1.72
NUP54-206ENST00000508465 KIR2DS3Q14952 304 aa4.32□□□□□ -1.72
NUP54-206ENST00000508465 SLC5A12Q1EHB4 618 aa4.32□□□□□ -1.72
NUP54-206ENST00000508465 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.32□□□□□ -1.72
NUP54-206ENST00000508465 SPANXN3Q5MJ09 141 aa4.32□□□□□ -1.72
NUP54-206ENST00000508465 TEDDM1Q5T9Z0 273 aa4.32□□□□□ -1.72
NUP54-206ENST00000508465 NXNQ6DKJ4 435 aa4.32□□□□□ -1.72
NUP54-206ENST00000508465 FRMPD2BQ6IN97 320 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms