RNA–Protein interactions for RNA: ENST00000495952.5

SURF1-204, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

TSL 2

Gene SURF1, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-204ENST00000495952 PCDHGB2Q9Y5G2 931 aa9.39□□□□□ -0.91
SURF1-204ENST00000495952 NOTCH4Q99466 2003 aa9.38□□□□□ -0.91
SURF1-204ENST00000495952 LOC100506127A0A0U1RQW1 187 aa9.38□□□□□ -0.91
SURF1-204ENST00000495952 HYKKA2RU49 373 aa9.38□□□□□ -0.91
SURF1-204ENST00000495952 KRT87PA6NCN2 255 aa9.38□□□□□ -0.91
SURF1-204ENST00000495952 TTC36A6NLP5 189 aa9.38□□□□□ -0.91
SURF1-204ENST00000495952 ARHGAP33O14559 1287 aa9.38□□□□□ -0.91
SURF1-204ENST00000495952 PCDH17O14917 1159 aa9.38□□□□□ -0.91
SURF1-204ENST00000495952 KMOO15229 486 aa9.38□□□□□ -0.91
SURF1-204ENST00000495952 CAPN5O15484 640 aaPredicted RBP9.38□□□□□ -0.91
SURF1-204ENST00000495952 PDPK1O15530 556 aa9.38□□□□□ -0.91
SURF1-204ENST00000495952 PQBP1O60828 265 aaKnown RBP9.38□□□□□ -0.91
SURF1-204ENST00000495952 KLHL18O94889 574 aa9.38□□□□□ -0.91
SURF1-204ENST00000495952 MFN2O95140 757 aa9.38□□□□□ -0.91
SURF1-204ENST00000495952 IL1AP01583 271 aa9.38□□□□□ -0.91
SURF1-204ENST00000495952 PRNPP04156 253 aa9.38□□□□□ -0.91
SURF1-204ENST00000495952 H1F0P07305 194 aaKnown RBP9.38□□□□□ -0.91
SURF1-204ENST00000495952 IL3P08700 152 aa9.38□□□□□ -0.91
SURF1-204ENST00000495952 GAAP10253 952 aa9.38□□□□□ -0.91
SURF1-204ENST00000495952 ELAVL4P26378 380 aaKnown RBP9.38□□□□□ -0.91
SURF1-204ENST00000495952 ACADLP28330 430 aa9.38□□□□□ -0.91
SURF1-204ENST00000495952 CNR2P34972 360 aa9.38□□□□□ -0.91
SURF1-204ENST00000495952 RPS5P46782 204 aaKnown RBP9.38□□□□□ -0.91
SURF1-204ENST00000495952 KCNJ5P48544 419 aa9.38□□□□□ -0.91
SURF1-204ENST00000495952 ANXA11P50995 505 aaKnown RBP9.38□□□□□ -0.91
SURF1-204ENST00000495952 CCL23P55773 120 aa9.38□□□□□ -0.91
SURF1-204ENST00000495952 WDR5P61964 334 aaKnown RBP9.38□□□□□ -0.91
SURF1-204ENST00000495952 REEP5Q00765 189 aa9.38□□□□□ -0.91
SURF1-204ENST00000495952 SLC13A2Q13183 592 aa9.38□□□□□ -0.91
SURF1-204ENST00000495952 STARD3Q14849 445 aa9.38□□□□□ -0.91
SURF1-204ENST00000495952 HEPACAMQ14CZ8 416 aa9.38□□□□□ -0.91
SURF1-204ENST00000495952 KCNJ8Q15842 424 aa9.38□□□□□ -0.91
SURF1-204ENST00000495952 SSX1Q16384 188 aa9.38□□□□□ -0.91
SURF1-204ENST00000495952 DUSP6Q16828 381 aa9.38□□□□□ -0.91
SURF1-204ENST00000495952 LRIT3Q3SXY7 679 aa9.38□□□□□ -0.91
SURF1-204ENST00000495952 ARSIQ5FYB1 569 aa9.38□□□□□ -0.91
SURF1-204ENST00000495952 DCST1Q5T197 706 aa9.38□□□□□ -0.91
SURF1-204ENST00000495952 AGAP6Q5VW22 663 aa9.38□□□□□ -0.91
SURF1-204ENST00000495952 PRAMEF8Q5VWM4 474 aa9.38□□□□□ -0.91
SURF1-204ENST00000495952 PRAMEF7Q5VXH5 474 aa9.38□□□□□ -0.91
SURF1-204ENST00000495952 ADNP2Q6IQ32 1131 aa9.38□□□□□ -0.91
SURF1-204ENST00000495952 TMC5Q6UXY8 1006 aa9.38□□□□□ -0.91
SURF1-204ENST00000495952 TMIGD1Q6UXZ0 262 aa9.38□□□□□ -0.91
SURF1-204ENST00000495952 HEATR4Q86WZ0 1026 aa9.38□□□□□ -0.91
SURF1-204ENST00000495952 SNX29P2Q8IUI4 249 aa9.38□□□□□ -0.91
SURF1-204ENST00000495952 DCUN1D3Q8IWE4 304 aa9.38□□□□□ -0.91
SURF1-204ENST00000495952 CLDN22Q8N7P3 220 aa9.38□□□□□ -0.91
SURF1-204ENST00000495952 KREMEN2Q8NCW0 462 aa9.38□□□□□ -0.91
SURF1-204ENST00000495952 OR2L2Q8NH16 312 aa9.38□□□□□ -0.91
SURF1-204ENST00000495952 WDR48Q8TAF3 677 aa9.38□□□□□ -0.91
SURF1-204ENST00000495952 TP53INP1Q96A56 240 aa9.38□□□□□ -0.91
SURF1-204ENST00000495952 CIDECQ96AQ7 238 aaPredicted RBP9.38□□□□□ -0.91
SURF1-204ENST00000495952 RAD51AP1Q96B01 352 aa9.38□□□□□ -0.91
SURF1-204ENST00000495952 AGAP4Q96P64 663 aa9.38□□□□□ -0.91
SURF1-204ENST00000495952 ZNF607Q96SK3 696 aa9.38□□□□□ -0.91
SURF1-204ENST00000495952 MED18Q9BUE0 208 aa9.38□□□□□ -0.91
SURF1-204ENST00000495952 POLDIP3Q9BY77 421 aaKnown RBP9.38□□□□□ -0.91
SURF1-204ENST00000495952 CXorf36Q9H7Y0 433 aa9.38□□□□□ -0.91
SURF1-204ENST00000495952 HHATLQ9HCP6 504 aa9.38□□□□□ -0.91
SURF1-204ENST00000495952 MRPS18AQ9NVS2 196 aaKnown RBP9.38□□□□□ -0.91
SURF1-204ENST00000495952 SAGE1Q9NXZ1 904 aa9.38□□□□□ -0.91
SURF1-204ENST00000495952 EHD3Q9NZN3 535 aa9.38□□□□□ -0.91
SURF1-204ENST00000495952 TAAR2Q9P1P5 351 aa9.38□□□□□ -0.91
SURF1-204ENST00000495952 RAB23Q9ULC3 237 aa9.38□□□□□ -0.91
SURF1-204ENST00000495952 DIMT1Q9UNQ2 313 aaKnown RBP9.38□□□□□ -0.91
SURF1-204ENST00000495952 CCDC88CQ9P219 2028 aa9.38□□□□□ -0.91
SURF1-204ENST00000495952 COL4A3Q01955 1670 aa9.37□□□□□ -0.91
SURF1-204ENST00000495952 STK25O00506 426 aa9.37□□□□□ -0.91
SURF1-204ENST00000495952 CSO75390 466 aaKnown RBP9.37□□□□□ -0.91
SURF1-204ENST00000495952 SOD1P00441 154 aa9.37□□□□□ -0.91
SURF1-204ENST00000495952 CTSLP07711 333 aa9.37□□□□□ -0.91
SURF1-204ENST00000495952 POU2F2P09086 479 aa9.37□□□□□ -0.91
SURF1-204ENST00000495952 SYN1P17600 705 aa9.37□□□□□ -0.91
SURF1-204ENST00000495952 ALOX12P18054 663 aa9.37□□□□□ -0.91
SURF1-204ENST00000495952 TNFRSF1BP20333 461 aa9.37□□□□□ -0.91
SURF1-204ENST00000495952 GSTM3P21266 225 aa9.37□□□□□ -0.91
SURF1-204ENST00000495952 PSMA1P25786 263 aaKnown RBP9.37□□□□□ -0.91
SURF1-204ENST00000495952 OR1E2P47887 323 aa9.37□□□□□ -0.91
SURF1-204ENST00000495952 RORCP51449 518 aa9.37□□□□□ -0.91
SURF1-204ENST00000495952 ARFIP1P53367 373 aa9.37□□□□□ -0.91
SURF1-204ENST00000495952 ATN1P54259 1190 aaPredicted RBP9.37□□□□□ -0.91
SURF1-204ENST00000495952 PSPHP78330 225 aa9.37□□□□□ -0.91
SURF1-204ENST00000495952 ZNF91Q05481 1191 aa9.37□□□□□ -0.91
SURF1-204ENST00000495952 GNA13Q14344 377 aa9.37□□□□□ -0.91
SURF1-204ENST00000495952 SEC23BQ15437 767 aa9.37□□□□□ -0.91
SURF1-204ENST00000495952 SPHARQ15513 63 aa9.37□□□□□ -0.91
SURF1-204ENST00000495952 MED22Q15528 200 aa9.37□□□□□ -0.91
SURF1-204ENST00000495952 SF1Q15637 639 aaKnown RBP9.37□□□□□ -0.91
SURF1-204ENST00000495952 TMEM44Q2T9K0 475 aa9.37□□□□□ -0.91
SURF1-204ENST00000495952 TMEM52BQ4KMG9 183 aa9.37□□□□□ -0.91
SURF1-204ENST00000495952 LRRC73Q5JTD7 316 aa9.37□□□□□ -0.91
SURF1-204ENST00000495952 KHDRBS2Q5VWX1 349 aaKnown RBP9.37□□□□□ -0.91
SURF1-204ENST00000495952 PPP2R2DQ66LE6 453 aa9.37□□□□□ -0.91
SURF1-204ENST00000495952 DESI1Q6ICB0 168 aa9.37□□□□□ -0.91
SURF1-204ENST00000495952 CCBE1Q6UXH8 406 aaPredicted RBP9.37□□□□□ -0.91
SURF1-204ENST00000495952 CASP12Q6UXS9 341 aa9.37□□□□□ -0.91
SURF1-204ENST00000495952 CEACAM20Q6UY09 585 aa9.37□□□□□ -0.91
SURF1-204ENST00000495952 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.37□□□□□ -0.91
SURF1-204ENST00000495952 TMEM64Q6YI46 380 aa9.37□□□□□ -0.91
SURF1-204ENST00000495952 PARS2Q7L3T8 475 aaKnown RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms