RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 TFAP2CQ92754 450 aa7.78□□□□□ -1.16
HDAC6-234ENST00000493923 FBXL8Q96CD0 374 aa7.78□□□□□ -1.16
HDAC6-234ENST00000493923 ASB9Q96DX5 294 aa7.78□□□□□ -1.16
HDAC6-234ENST00000493923 C19orf43Q9BQ61 176 aa7.78□□□□□ -1.16
HDAC6-234ENST00000493923 MESP1Q9BRJ9 268 aa7.78□□□□□ -1.16
HDAC6-234ENST00000493923 MVB12BQ9H7P6 319 aa7.78□□□□□ -1.16
HDAC6-234ENST00000493923 NANOGQ9H9S0 305 aa7.78□□□□□ -1.16
HDAC6-234ENST00000493923 C12orf4Q9NQ89 552 aa7.78□□□□□ -1.16
HDAC6-234ENST00000493923 TCF7L2Q9NQB0 619 aa7.78□□□□□ -1.16
HDAC6-234ENST00000493923 SLC22A11Q9NSA0 550 aa7.78□□□□□ -1.16
HDAC6-234ENST00000493923 DHCR7Q9UBM7 475 aaKnown RBP7.78□□□□□ -1.16
HDAC6-234ENST00000493923 MID2Q9UJV3 735 aa7.78□□□□□ -1.16
HDAC6-234ENST00000493923 CDC14AQ9UNH5 594 aa7.78□□□□□ -1.16
HDAC6-234ENST00000493923 RUVBL2Q9Y230 463 aaKnown RBP7.78□□□□□ -1.16
HDAC6-234ENST00000493923 TCAF1Q9Y4C2 921 aa7.78□□□□□ -1.16
HDAC6-234ENST00000493923 PCDHB3Q9Y5E6 796 aa7.78□□□□□ -1.16
HDAC6-234ENST00000493923 HEBP2Q9Y5Z4 205 aa7.78□□□□□ -1.16
HDAC6-234ENST00000493923 POLEQ07864 2286 aa7.78□□□□□ -1.16
HDAC6-234ENST00000493923 DOPEY1Q5JWR5 2465 aa7.78□□□□□ -1.16
HDAC6-234ENST00000493923 PCM1Q15154 2024 aa7.78□□□□□ -1.16
HDAC6-234ENST00000493923 DIDO1Q9BTC0 2240 aaKnown RBP7.77□□□□□ -1.17
HDAC6-234ENST00000493923 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.77□□□□□ -1.17
HDAC6-234ENST00000493923 A6NL46 340 aa7.77□□□□□ -1.17
HDAC6-234ENST00000493923 SLCO1B7G3V0H7 640 aa7.77□□□□□ -1.17
HDAC6-234ENST00000493923 MKRN2OSH3BPM6 223 aa7.77□□□□□ -1.17
HDAC6-234ENST00000493923 IFRD1O00458 451 aaPredicted RBP7.77□□□□□ -1.17
HDAC6-234ENST00000493923 PDPK1O15530 556 aa7.77□□□□□ -1.17
HDAC6-234ENST00000493923 PHGDHO43175 533 aaKnown RBP7.77□□□□□ -1.17
HDAC6-234ENST00000493923 GLRA3O75311 464 aa7.77□□□□□ -1.17
HDAC6-234ENST00000493923 KLF7O75840 302 aaPredicted RBP7.77□□□□□ -1.17
HDAC6-234ENST00000493923 CEACAM4O75871 244 aa7.77□□□□□ -1.17
HDAC6-234ENST00000493923 AP2A2O94973 939 aa7.77□□□□□ -1.17
HDAC6-234ENST00000493923 MED26O95402 600 aa7.77□□□□□ -1.17
HDAC6-234ENST00000493923 RECKO95980 971 aa7.77□□□□□ -1.17
HDAC6-234ENST00000493923 BMP2P12643 396 aa7.77□□□□□ -1.17
HDAC6-234ENST00000493923 CDH1P12830 882 aa7.77□□□□□ -1.17
HDAC6-234ENST00000493923 ARNTP27540 789 aa7.77□□□□□ -1.17
HDAC6-234ENST00000493923 NMBRP28336 390 aa7.77□□□□□ -1.17
HDAC6-234ENST00000493923 RCVRNP35243 200 aa7.77□□□□□ -1.17
HDAC6-234ENST00000493923 NSG1P42857 185 aa7.77□□□□□ -1.17
HDAC6-234ENST00000493923 GCGRP47871 477 aa7.77□□□□□ -1.17
HDAC6-234ENST00000493923 CLK3P49761 638 aaKnown RBP7.77□□□□□ -1.17
HDAC6-234ENST00000493923 PRKAA2P54646 552 aa7.77□□□□□ -1.17
HDAC6-234ENST00000493923 SESN2P58004 480 aaPredicted RBP7.77□□□□□ -1.17
HDAC6-234ENST00000493923 DEFA1P59665 94 aa7.77□□□□□ -1.17
HDAC6-234ENST00000493923 DEFA3P59666 94 aa7.77□□□□□ -1.17
HDAC6-234ENST00000493923 RPS15P62841 145 aaKnown RBP7.77□□□□□ -1.17
HDAC6-234ENST00000493923 MPP1Q00013 466 aa7.77□□□□□ -1.17
HDAC6-234ENST00000493923 CDH17Q12864 832 aa7.77□□□□□ -1.17
HDAC6-234ENST00000493923 PRKAA1Q13131 559 aa7.77□□□□□ -1.17
HDAC6-234ENST00000493923 RPA4Q13156 261 aa7.77□□□□□ -1.17
HDAC6-234ENST00000493923 TOP3AQ13472 1001 aaPredicted RBP7.77□□□□□ -1.17
HDAC6-234ENST00000493923 CDK10Q15131 360 aa7.77□□□□□ -1.17
HDAC6-234ENST00000493923 TYSND1Q2T9J0 566 aa7.77□□□□□ -1.17
HDAC6-234ENST00000493923 FGD3Q5JSP0 725 aa7.77□□□□□ -1.17
HDAC6-234ENST00000493923 CCNYL2Q5T2Q4 361 aa7.77□□□□□ -1.17
HDAC6-234ENST00000493923 RSBN1Q5VWQ0 802 aaPredicted RBP7.77□□□□□ -1.17
HDAC6-234ENST00000493923 CES3Q6UWW8 571 aa7.77□□□□□ -1.17
HDAC6-234ENST00000493923 TIFABQ6ZNK6 161 aa7.77□□□□□ -1.17
HDAC6-234ENST00000493923 ZBTB49Q6ZSB9 765 aa7.77□□□□□ -1.17
HDAC6-234ENST00000493923 SYVN1Q86TM6 617 aa7.77□□□□□ -1.17
HDAC6-234ENST00000493923 CARFQ8N187 725 aa7.77□□□□□ -1.17
HDAC6-234ENST00000493923 FAM109AQ8N4B1 249 aa7.77□□□□□ -1.17
HDAC6-234ENST00000493923 DNAJC22Q8N4W6 341 aa7.77□□□□□ -1.17
HDAC6-234ENST00000493923 DNAAF3Q8N9W5 541 aa7.77□□□□□ -1.17
HDAC6-234ENST00000493923 FAM47BQ8NA70 645 aa7.77□□□□□ -1.17
HDAC6-234ENST00000493923 Q8NA96 180 aa7.77□□□□□ -1.17
HDAC6-234ENST00000493923 VPS37AQ8NEZ2 397 aa7.77□□□□□ -1.17
HDAC6-234ENST00000493923 ABHD11Q8NFV4 315 aa7.77□□□□□ -1.17
HDAC6-234ENST00000493923 OR8K5Q8NH50 307 aa7.77□□□□□ -1.17
HDAC6-234ENST00000493923 LILRB1Q8NHL6 650 aaPredicted RBP7.77□□□□□ -1.17
HDAC6-234ENST00000493923 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.77□□□□□ -1.17
HDAC6-234ENST00000493923 LRRC39Q96DD0 335 aa7.77□□□□□ -1.17
HDAC6-234ENST00000493923 LRFN5Q96NI6 719 aa7.77□□□□□ -1.17
HDAC6-234ENST00000493923 NUDT9Q9BW91 350 aa7.77□□□□□ -1.17
HDAC6-234ENST00000493923 GPR87Q9BY21 358 aa7.77□□□□□ -1.17
HDAC6-234ENST00000493923 ING2Q9H160 280 aa7.77□□□□□ -1.17
HDAC6-234ENST00000493923 COQ10BQ9H8M1 238 aa7.77□□□□□ -1.17
HDAC6-234ENST00000493923 SYNPO2LQ9H987 977 aa7.77□□□□□ -1.17
HDAC6-234ENST00000493923 EFCAB1Q9HAE3 211 aa7.77□□□□□ -1.17
HDAC6-234ENST00000493923 SYTL2Q9HCH5 934 aa7.77□□□□□ -1.17
HDAC6-234ENST00000493923 CHRAC1Q9NRG0 131 aa7.77□□□□□ -1.17
HDAC6-234ENST00000493923 RAB6BQ9NRW1 208 aa7.77□□□□□ -1.17
HDAC6-234ENST00000493923 GIMAP4Q9NUV9 329 aa7.77□□□□□ -1.17
HDAC6-234ENST00000493923 GALPQ9UBC7 116 aa7.77□□□□□ -1.17
HDAC6-234ENST00000493923 TCFL5Q9UL49 500 aa7.77□□□□□ -1.17
HDAC6-234ENST00000493923 ASF1AQ9Y294 204 aa7.77□□□□□ -1.17
HDAC6-234ENST00000493923 CACNA1DQ01668 2161 aa7.76□□□□□ -1.17
HDAC6-234ENST00000493923 C2orf74A8MZ97 194 aa7.76□□□□□ -1.17
HDAC6-234ENST00000493923 H0YAE9 185 aa7.76□□□□□ -1.17
HDAC6-234ENST00000493923 PSMD3O43242 534 aa7.76□□□□□ -1.17
HDAC6-234ENST00000493923 ALOX12BO75342 701 aa7.76□□□□□ -1.17
HDAC6-234ENST00000493923 APOA1P02647 267 aa7.76□□□□□ -1.17
HDAC6-234ENST00000493923 UMODP07911 640 aa7.76□□□□□ -1.17
HDAC6-234ENST00000493923 RAB40ALP0C0E4 278 aa7.76□□□□□ -1.17
HDAC6-234ENST00000493923 GFAPP14136 432 aa7.76□□□□□ -1.17
HDAC6-234ENST00000493923 CYP2A7P20853 494 aa7.76□□□□□ -1.17
HDAC6-234ENST00000493923 MAGP20916 626 aa7.76□□□□□ -1.17
HDAC6-234ENST00000493923 ENPP1P22413 925 aa7.76□□□□□ -1.17
HDAC6-234ENST00000493923 GNLYP22749 145 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms