RNA–Protein interactions for RNA: ENST00000489500.1

TNRC6B-208, Transcript of trinucleotide repeat containing 6B, humanhuman

TSL 2

Gene TNRC6B, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-208ENST00000489500 TRIM31Q9BZY9 425 aa8.29□□□□□ -1.08
TNRC6B-208ENST00000489500 RHOJQ9H4E5 214 aa8.29□□□□□ -1.08
TNRC6B-208ENST00000489500 GPRC5BQ9NZH0 403 aa8.29□□□□□ -1.08
TNRC6B-208ENST00000489500 OARD1Q9Y530 152 aa8.29□□□□□ -1.08
TNRC6B-208ENST00000489500 SPACA6W5XKT8 324 aa8.29□□□□□ -1.08
TNRC6B-208ENST00000489500 GTF3C1Q12789 2109 aa8.29□□□□□ -1.08
TNRC6B-208ENST00000489500 IGHV3-20A0A0C4DH32 117 aa8.28□□□□□ -1.08
TNRC6B-208ENST00000489500 FAM227AF5H4B4 570 aa8.28□□□□□ -1.08
TNRC6B-208ENST00000489500 CCL21O00585 134 aa8.28□□□□□ -1.08
TNRC6B-208ENST00000489500 E2F3O00716 465 aa8.28□□□□□ -1.08
TNRC6B-208ENST00000489500 EIF3HO15372 352 aaKnown RBP eCLIP8.28□□□□□ -1.08
TNRC6B-208ENST00000489500 CHST10O43529 356 aa8.28□□□□□ -1.08
TNRC6B-208ENST00000489500 B4GALT2O60909 372 aa8.28□□□□□ -1.08
TNRC6B-208ENST00000489500 BANF1O75531 89 aa8.28□□□□□ -1.08
TNRC6B-208ENST00000489500 CDC123O75794 336 aaPredicted RBP8.28□□□□□ -1.08
TNRC6B-208ENST00000489500 WDR47O94967 919 aa8.28□□□□□ -1.08
TNRC6B-208ENST00000489500 F10P00742 488 aa8.28□□□□□ -1.08
TNRC6B-208ENST00000489500 GSTA2P09210 222 aa8.28□□□□□ -1.08
TNRC6B-208ENST00000489500 ZNF888P0CJ79 500 aaPredicted RBP8.28□□□□□ -1.08
TNRC6B-208ENST00000489500 C1GALT1C1LP0DN25 315 aa8.28□□□□□ -1.08
TNRC6B-208ENST00000489500 DCTP40126 519 aa8.28□□□□□ -1.08
TNRC6B-208ENST00000489500 SLC26A5P58743 744 aa8.28□□□□□ -1.08
TNRC6B-208ENST00000489500 ATP6V0D1P61421 351 aa8.28□□□□□ -1.08
TNRC6B-208ENST00000489500 REEP5Q00765 189 aa8.28□□□□□ -1.08
TNRC6B-208ENST00000489500 RHAGQ02094 409 aa8.28□□□□□ -1.08
TNRC6B-208ENST00000489500 CAV1Q03135 178 aa8.28□□□□□ -1.08
TNRC6B-208ENST00000489500 USP10Q14694 798 aaKnown RBP8.28□□□□□ -1.08
TNRC6B-208ENST00000489500 OR1C1Q15619 314 aa8.28□□□□□ -1.08
TNRC6B-208ENST00000489500 PAGE2BQ5JRK9 111 aa8.28□□□□□ -1.08
TNRC6B-208ENST00000489500 CDKL4Q5MAI5 379 aa8.28□□□□□ -1.08
TNRC6B-208ENST00000489500 CATSPEREQ5SY80 951 aa8.28□□□□□ -1.08
TNRC6B-208ENST00000489500 SLC25A25Q6KCM7 469 aa8.28□□□□□ -1.08
TNRC6B-208ENST00000489500 TRIM40Q6P9F5 258 aa8.28□□□□□ -1.08
TNRC6B-208ENST00000489500 LANCL3Q6ZV70 420 aa8.28□□□□□ -1.08
TNRC6B-208ENST00000489500 PRSS41Q7RTY9 318 aa8.28□□□□□ -1.08
TNRC6B-208ENST00000489500 ZC3HC1Q86WB0 502 aaKnown RBP8.28□□□□□ -1.08
TNRC6B-208ENST00000489500 RPS19BP1Q86WX3 136 aaKnown RBP8.28□□□□□ -1.08
TNRC6B-208ENST00000489500 CRLF3Q8IUI8 442 aa8.28□□□□□ -1.08
TNRC6B-208ENST00000489500 ZBED8Q8IZ13 594 aa8.28□□□□□ -1.08
TNRC6B-208ENST00000489500 BEST3Q8N1M1 668 aa8.28□□□□□ -1.08
TNRC6B-208ENST00000489500 AFAP1L2Q8N4X5 818 aa8.28□□□□□ -1.08
TNRC6B-208ENST00000489500 ZNF740Q8NDX6 193 aa8.28□□□□□ -1.08
TNRC6B-208ENST00000489500 SRFBP1Q8NEF9 429 aaKnown RBP8.28□□□□□ -1.08
TNRC6B-208ENST00000489500 TSNARE1Q96NA8 513 aa8.28□□□□□ -1.08
TNRC6B-208ENST00000489500 DEFB126Q9BYW3 111 aa8.28□□□□□ -1.08
TNRC6B-208ENST00000489500 ROGDIQ9GZN7 287 aa8.28□□□□□ -1.08
TNRC6B-208ENST00000489500 CDCP1Q9H5V8 836 aa8.28□□□□□ -1.08
TNRC6B-208ENST00000489500 COPS7BQ9H9Q2 264 aaPredicted RBP8.28□□□□□ -1.08
TNRC6B-208ENST00000489500 CHST11Q9NPF2 352 aa8.28□□□□□ -1.08
TNRC6B-208ENST00000489500 WWOXQ9NZC7 414 aa8.28□□□□□ -1.08
TNRC6B-208ENST00000489500 LRFN1Q9P244 771 aa8.28□□□□□ -1.08
TNRC6B-208ENST00000489500 ENTPD4Q9Y227 616 aa8.28□□□□□ -1.08
TNRC6B-208ENST00000489500 SLC22A14Q9Y267 594 aa8.28□□□□□ -1.08
TNRC6B-208ENST00000489500 UTP11Q9Y3A2 253 aaKnown RBP8.28□□□□□ -1.08
TNRC6B-208ENST00000489500 MMACHCQ9Y4U1 282 aa8.28□□□□□ -1.08
TNRC6B-208ENST00000489500 USP9XQ93008 2570 aaPredicted RBP8.27□□□□□ -1.08
TNRC6B-208ENST00000489500 NPEPPSL1A6NEC2 478 aa8.27□□□□□ -1.09
TNRC6B-208ENST00000489500 ZNF860A6NHJ4 632 aa8.27□□□□□ -1.09
TNRC6B-208ENST00000489500 GABRR3A8MPY1 467 aa8.27□□□□□ -1.09
TNRC6B-208ENST00000489500 PRSS44E7EML9 344 aa8.27□□□□□ -1.09
TNRC6B-208ENST00000489500 KLRC4-KLRK1H3BQV0 150 aa8.27□□□□□ -1.09
TNRC6B-208ENST00000489500 B3GALT2O43825 422 aa8.27□□□□□ -1.09
TNRC6B-208ENST00000489500 CLDN1O95832 211 aa8.27□□□□□ -1.09
TNRC6B-208ENST00000489500 TSPAN12O95859 305 aa8.27□□□□□ -1.09
TNRC6B-208ENST00000489500 TP53P04637 393 aaPredicted RBP8.27□□□□□ -1.09
TNRC6B-208ENST00000489500 SP1P08047 785 aa8.27□□□□□ -1.09
TNRC6B-208ENST00000489500 CELA2AP08217 269 aa8.27□□□□□ -1.09
TNRC6B-208ENST00000489500 STMN1P16949 149 aa8.27□□□□□ -1.09
TNRC6B-208ENST00000489500 IVDP26440 423 aa8.27□□□□□ -1.09
TNRC6B-208ENST00000489500 SPRP35270 261 aaPredicted RBP8.27□□□□□ -1.09
TNRC6B-208ENST00000489500 HNF4AP41235 474 aa8.27□□□□□ -1.09
TNRC6B-208ENST00000489500 CYB561P49447 251 aa8.27□□□□□ -1.09
TNRC6B-208ENST00000489500 CLCN2P51788 898 aa8.27□□□□□ -1.09
TNRC6B-208ENST00000489500 KCNK10P57789 538 aa8.27□□□□□ -1.09
TNRC6B-208ENST00000489500 TAS2R39P59534 338 aa8.27□□□□□ -1.09
TNRC6B-208ENST00000489500 RAB8AP61006 207 aa8.27□□□□□ -1.09
TNRC6B-208ENST00000489500 BTN3A2P78410 334 aa8.27□□□□□ -1.09
TNRC6B-208ENST00000489500 TIAL1Q01085 375 aaKnown RBP eCLIP8.27□□□□□ -1.09
TNRC6B-208ENST00000489500 ART3Q13508 389 aa8.27□□□□□ -1.09
TNRC6B-208ENST00000489500 TUBA3CQ13748 450 aa8.27□□□□□ -1.09
TNRC6B-208ENST00000489500 MAPKAPK3Q16644 382 aa8.27□□□□□ -1.09
TNRC6B-208ENST00000489500 TOR1AIP1Q5JTV8 583 aa8.27□□□□□ -1.09
TNRC6B-208ENST00000489500 C1QL3Q5VWW1 255 aa8.27□□□□□ -1.09
TNRC6B-208ENST00000489500 ZNF324BQ6AW86 544 aaPredicted RBP8.27□□□□□ -1.09
TNRC6B-208ENST00000489500 SULT1C3Q6IMI6 304 aa8.27□□□□□ -1.09
TNRC6B-208ENST00000489500 TUBA3EQ6PEY2 450 aa8.27□□□□□ -1.09
TNRC6B-208ENST00000489500 TRMT10BQ6PF06 316 aaKnown RBP8.27□□□□□ -1.09
TNRC6B-208ENST00000489500 XKRXQ6PP77 449 aa8.27□□□□□ -1.09
TNRC6B-208ENST00000489500 SBSNQ6UWP8 590 aa8.27□□□□□ -1.09
TNRC6B-208ENST00000489500 TMIGD1Q6UXZ0 262 aa8.27□□□□□ -1.09
TNRC6B-208ENST00000489500 PDSS2Q86YH6 399 aa8.27□□□□□ -1.09
TNRC6B-208ENST00000489500 GPSM1Q86YR5 675 aa8.27□□□□□ -1.09
TNRC6B-208ENST00000489500 ZNF808Q8N4W9 903 aaPredicted RBP8.27□□□□□ -1.09
TNRC6B-208ENST00000489500 POGLUT1Q8NBL1 392 aa8.27□□□□□ -1.09
TNRC6B-208ENST00000489500 UTP15Q8TED0 518 aaKnown RBP8.27□□□□□ -1.09
TNRC6B-208ENST00000489500 THAP3Q8WTV1 239 aaPredicted RBP8.27□□□□□ -1.09
TNRC6B-208ENST00000489500 UBE2E3Q969T4 207 aa8.27□□□□□ -1.09
TNRC6B-208ENST00000489500 TAAR6Q96RI8 345 aa8.27□□□□□ -1.09
TNRC6B-208ENST00000489500 OLFM1Q99784 485 aa8.27□□□□□ -1.09
TNRC6B-208ENST00000489500 CPNE1Q99829 537 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms