RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 KBTBD3Q8NAB2 608 aa3.99□□□□□ -1.77
VPS13A-211ENST00000484581 GPRC5AQ8NFJ5 357 aa3.99□□□□□ -1.77
VPS13A-211ENST00000484581 OR52M1Q8NGK5 317 aa3.99□□□□□ -1.77
VPS13A-211ENST00000484581 OR10T2Q8NGX3 314 aa3.99□□□□□ -1.77
VPS13A-211ENST00000484581 APOBEC4Q8WW27 367 aaKnown RBP3.99□□□□□ -1.77
VPS13A-211ENST00000484581 PHYHIPQ92561 330 aa3.99□□□□□ -1.77
VPS13A-211ENST00000484581 P3H4Q92791 437 aa3.99□□□□□ -1.77
VPS13A-211ENST00000484581 HIST1H2ACQ93077 130 aa3.99□□□□□ -1.77
VPS13A-211ENST00000484581 ZNF354BQ96LW1 612 aa3.99□□□□□ -1.77
VPS13A-211ENST00000484581 IL12RB2Q99665 862 aa3.99□□□□□ -1.77
VPS13A-211ENST00000484581 WRAP53Q9BUR4 548 aaKnown RBP3.99□□□□□ -1.77
VPS13A-211ENST00000484581 PITPNM3Q9BZ71 974 aa3.99□□□□□ -1.77
VPS13A-211ENST00000484581 POLR1EQ9GZS1 481 aaKnown RBP3.99□□□□□ -1.77
VPS13A-211ENST00000484581 WWP1Q9H0M0 922 aa3.99□□□□□ -1.77
VPS13A-211ENST00000484581 YAE1D1Q9NRH1 226 aa3.99□□□□□ -1.77
VPS13A-211ENST00000484581 TECRQ9NZ01 308 aaKnown RBP3.99□□□□□ -1.77
VPS13A-211ENST00000484581 ERVK-18Q9QC07 812 aa3.99□□□□□ -1.77
VPS13A-211ENST00000484581 ZNF490Q9ULM2 529 aaPredicted RBP3.99□□□□□ -1.77
VPS13A-211ENST00000484581 DIMT1Q9UNQ2 313 aaKnown RBP3.99□□□□□ -1.77
VPS13A-211ENST00000484581 KDRP35968 1356 aa3.99□□□□□ -1.77
VPS13A-211ENST00000484581 ZMYM6O95789 1325 aa3.98□□□□□ -1.77
VPS13A-211ENST00000484581 ANKRD30BLA7E2S9 258 aa3.98□□□□□ -1.77
VPS13A-211ENST00000484581 LACTBL1A8MY62 500 aa3.98□□□□□ -1.77
VPS13A-211ENST00000484581 LGALS8O00214 317 aa3.98□□□□□ -1.77
VPS13A-211ENST00000484581 KRT86O43790 486 aa3.98□□□□□ -1.77
VPS13A-211ENST00000484581 ECE2O60344 883 aa3.98□□□□□ -1.77
VPS13A-211ENST00000484581 CSDE1O75534 798 aaKnown RBP3.98□□□□□ -1.77
VPS13A-211ENST00000484581 EDN1P05305 212 aa3.98□□□□□ -1.77
VPS13A-211ENST00000484581 UMODP07911 640 aa3.98□□□□□ -1.77
VPS13A-211ENST00000484581 TPM2P07951 284 aa3.98□□□□□ -1.77
VPS13A-211ENST00000484581 SLC2A2P11168 524 aaPredicted RBP3.98□□□□□ -1.77
VPS13A-211ENST00000484581 EPB41P11171 864 aaKnown RBP3.98□□□□□ -1.77
VPS13A-211ENST00000484581 GP9P14770 177 aa3.98□□□□□ -1.77
VPS13A-211ENST00000484581 PAX1P15863 534 aa3.98□□□□□ -1.77
VPS13A-211ENST00000484581 GPX3P22352 226 aa3.98□□□□□ -1.77
VPS13A-211ENST00000484581 AADACP22760 399 aa3.98□□□□□ -1.77
VPS13A-211ENST00000484581 GLRA1P23415 457 aa3.98□□□□□ -1.77
VPS13A-211ENST00000484581 GLRA2P23416 452 aa3.98□□□□□ -1.77
VPS13A-211ENST00000484581 TMOD1P28289 359 aa3.98□□□□□ -1.77
VPS13A-211ENST00000484581 OTX2P32243 289 aa3.98□□□□□ -1.77
VPS13A-211ENST00000484581 ADRA1AP35348 466 aa3.98□□□□□ -1.77
VPS13A-211ENST00000484581 LIMK2P53671 638 aa3.98□□□□□ -1.77
VPS13A-211ENST00000484581 CHIT1Q13231 466 aa3.98□□□□□ -1.77
VPS13A-211ENST00000484581 GPM6BQ13491 265 aa3.98□□□□□ -1.77
VPS13A-211ENST00000484581 KRT81Q14533 505 aa3.98□□□□□ -1.77
VPS13A-211ENST00000484581 DUSP5Q16690 384 aa3.98□□□□□ -1.77
VPS13A-211ENST00000484581 MAJINQ3KP22 176 aa3.98□□□□□ -1.77
VPS13A-211ENST00000484581 ADPRMQ3LIE5 342 aa3.98□□□□□ -1.77
VPS13A-211ENST00000484581 NADK2Q4G0N4 442 aa3.98□□□□□ -1.77
VPS13A-211ENST00000484581 WDR38Q5JTN6 314 aa3.98□□□□□ -1.77
VPS13A-211ENST00000484581 LIPJQ5W064 366 aa3.98□□□□□ -1.77
VPS13A-211ENST00000484581 KRTAP5-1Q6L8H4 278 aa3.98□□□□□ -1.77
VPS13A-211ENST00000484581 LRRC8BQ6P9F7 803 aa3.98□□□□□ -1.77
VPS13A-211ENST00000484581 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.98□□□□□ -1.77
VPS13A-211ENST00000484581 RFPL4BQ6ZWI9 263 aa3.98□□□□□ -1.77
VPS13A-211ENST00000484581 VASH2Q86V25 355 aa3.98□□□□□ -1.77
VPS13A-211ENST00000484581 TCEANCQ8N8B7 351 aa3.98□□□□□ -1.77
VPS13A-211ENST00000484581 STKLD1Q8NE28 680 aa3.98□□□□□ -1.77
VPS13A-211ENST00000484581 DMBX1Q8NFW5 382 aa3.98□□□□□ -1.77
VPS13A-211ENST00000484581 OR13A1Q8NGR1 328 aa3.98□□□□□ -1.77
VPS13A-211ENST00000484581 OR2T34Q8NGX1 318 aa3.98□□□□□ -1.77
VPS13A-211ENST00000484581 C8orf46Q8TAG6 207 aa3.98□□□□□ -1.77
VPS13A-211ENST00000484581 ZNRF4Q8WWF5 429 aa3.98□□□□□ -1.77
VPS13A-211ENST00000484581 HPSE2Q8WWQ2 592 aa3.98□□□□□ -1.77
VPS13A-211ENST00000484581 SMPDL3AQ92484 453 aa3.98□□□□□ -1.77
VPS13A-211ENST00000484581 DYRK2Q92630 601 aa3.98□□□□□ -1.77
VPS13A-211ENST00000484581 MED30Q96HR3 178 aa3.98□□□□□ -1.77
VPS13A-211ENST00000484581 C10orf90Q96M02 699 aa3.98□□□□□ -1.77
VPS13A-211ENST00000484581 JPH2Q9BR39 696 aaPredicted RBP3.98□□□□□ -1.77
VPS13A-211ENST00000484581 C1QTNF4Q9BXJ3 329 aa3.98□□□□□ -1.77
VPS13A-211ENST00000484581 TDRD1Q9BXT4 1180 aaKnown RBP3.98□□□□□ -1.77
VPS13A-211ENST00000484581 MRPL13Q9BYD1 178 aaKnown RBP3.98□□□□□ -1.77
VPS13A-211ENST00000484581 BICC1Q9H694 974 aaKnown RBP3.98□□□□□ -1.77
VPS13A-211ENST00000484581 RMND5AQ9H871 391 aa3.98□□□□□ -1.77
VPS13A-211ENST00000484581 ATAD3AQ9NVI7 634 aa3.98□□□□□ -1.77
VPS13A-211ENST00000484581 GTSE1Q9NYZ3 720 aa3.98□□□□□ -1.77
VPS13A-211ENST00000484581 COX16Q9P0S2 106 aa3.98□□□□□ -1.77
VPS13A-211ENST00000484581 TAAR2Q9P1P5 351 aa3.98□□□□□ -1.77
VPS13A-211ENST00000484581 LHX3Q9UBR4 397 aa3.98□□□□□ -1.77
VPS13A-211ENST00000484581 HPCAL4Q9UM19 191 aa3.98□□□□□ -1.77
VPS13A-211ENST00000484581 SNX6Q9UNH7 406 aa3.98□□□□□ -1.77
VPS13A-211ENST00000484581 FOXJ3Q9UPW0 622 aa3.98□□□□□ -1.77
VPS13A-211ENST00000484581 ATG4BQ9Y4P1 393 aa3.98□□□□□ -1.77
VPS13A-211ENST00000484581 EME2A4GXA9 379 aaPredicted RBP3.97□□□□□ -1.77
VPS13A-211ENST00000484581 YJEFN3A6XGL0 299 aa3.97□□□□□ -1.77
VPS13A-211ENST00000484581 SLC1A7O00341 560 aa3.97□□□□□ -1.77
VPS13A-211ENST00000484581 MAGEB3O15480 346 aa3.97□□□□□ -1.77
VPS13A-211ENST00000484581 TBX19O60806 448 aa3.97□□□□□ -1.77
VPS13A-211ENST00000484581 SEC24AO95486 1093 aa3.97□□□□□ -1.77
VPS13A-211ENST00000484581 FGF19O95750 216 aa3.97□□□□□ -1.77
VPS13A-211ENST00000484581 EML2O95834 649 aa3.97□□□□□ -1.77
VPS13A-211ENST00000484581 VTNP04004 478 aa3.97□□□□□ -1.77
VPS13A-211ENST00000484581 ASNSP08243 561 aa3.97□□□□□ -1.77
VPS13A-211ENST00000484581 PRKAR1AP10644 381 aa3.97□□□□□ -1.77
VPS13A-211ENST00000484581 PDHBP11177 359 aa3.97□□□□□ -1.77
VPS13A-211ENST00000484581 RPL35AP18077 110 aaKnown RBP3.97□□□□□ -1.77
VPS13A-211ENST00000484581 PAICSP22234 425 aaKnown RBP3.97□□□□□ -1.77
VPS13A-211ENST00000484581 DPP4P27487 766 aa3.97□□□□□ -1.77
VPS13A-211ENST00000484581 PTPN4P29074 926 aa3.97□□□□□ -1.77
VPS13A-211ENST00000484581 FCGR2BP31994 310 aaPredicted RBP3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms