RNA–Protein interactions for RNA: ENST00000461118.5

COL9A2-205, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 1,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-205ENST00000461118 TGFBR3LH3BV60 316 aa17.18■□□□□ 0.34
COL9A2-205ENST00000461118 GOLGA8RI6L899 631 aa17.18■□□□□ 0.34
COL9A2-205ENST00000461118 PLPP1O14494 284 aa17.18■□□□□ 0.34
COL9A2-205ENST00000461118 CDK2AP1O14519 115 aa17.18■□□□□ 0.34
COL9A2-205ENST00000461118 SH3BGRLO75368 114 aa17.18■□□□□ 0.34
COL9A2-205ENST00000461118 PYGBP11216 843 aa17.18■□□□□ 0.34
COL9A2-205ENST00000461118 SSR2P43308 183 aa17.18■□□□□ 0.34
COL9A2-205ENST00000461118 HERVK_113P63132 956 aa17.18■□□□□ 0.34
COL9A2-205ENST00000461118 ZNF33BQ06732 778 aa17.18■□□□□ 0.34
COL9A2-205ENST00000461118 SLC13A2Q13183 592 aa17.18■□□□□ 0.34
COL9A2-205ENST00000461118 MEP1AQ16819 746 aa17.18■□□□□ 0.34
COL9A2-205ENST00000461118 FRG2Q64ET8 278 aa17.18■□□□□ 0.34
COL9A2-205ENST00000461118 MILR1Q7Z6M3 343 aa17.18■□□□□ 0.34
COL9A2-205ENST00000461118 CRLF3Q8IUI8 442 aa17.18■□□□□ 0.34
COL9A2-205ENST00000461118 ZCCHC7Q8N3Z6 543 aaKnown RBP17.18■□□□□ 0.34
COL9A2-205ENST00000461118 SLC5A8Q8N695 610 aa17.18■□□□□ 0.34
COL9A2-205ENST00000461118 C7orf57Q8NEG2 295 aa17.18■□□□□ 0.34
COL9A2-205ENST00000461118 MYRIPQ8NFW9 859 aa17.18■□□□□ 0.34
COL9A2-205ENST00000461118 OR1N1Q8NGS0 311 aa17.18■□□□□ 0.34
COL9A2-205ENST00000461118 NR4A3Q92570 626 aa17.18■□□□□ 0.34
COL9A2-205ENST00000461118 FRG2BQ96QU4 278 aa17.18■□□□□ 0.34
COL9A2-205ENST00000461118 NPAS2Q99743 824 aa17.18■□□□□ 0.34
COL9A2-205ENST00000461118 ERVK-6Q9BXR3 956 aa17.18■□□□□ 0.34
COL9A2-205ENST00000461118 ZNF717Q9BY31 904 aaPredicted RBP17.18■□□□□ 0.34
COL9A2-205ENST00000461118 PRM3Q9NNZ6 103 aa17.18■□□□□ 0.34
COL9A2-205ENST00000461118 SEMA4BQ9NPR2 832 aaPredicted RBP17.18■□□□□ 0.34
COL9A2-205ENST00000461118 MS4A12Q9NXJ0 267 aa17.18■□□□□ 0.34
COL9A2-205ENST00000461118 KLF2Q9Y5W3 355 aaPredicted RBP17.18■□□□□ 0.34
COL9A2-205ENST00000461118 SPACA6W5XKT8 324 aa17.18■□□□□ 0.34
COL9A2-205ENST00000461118 CACNA1CQ13936 2221 aa17.17■□□□□ 0.34
COL9A2-205ENST00000461118 SETD2Q9BYW2 2564 aaPredicted RBP17.17■□□□□ 0.34
COL9A2-205ENST00000461118 A0A1W2PPM1 405 aa17.17■□□□□ 0.34
COL9A2-205ENST00000461118 SAP18O00422 153 aaKnown RBP17.17■□□□□ 0.34
COL9A2-205ENST00000461118 DLX3O60479 287 aa17.17■□□□□ 0.34
COL9A2-205ENST00000461118 OTCP00480 354 aa17.17■□□□□ 0.34
COL9A2-205ENST00000461118 ATP5F1P24539 256 aaPredicted RBP17.17■□□□□ 0.34
COL9A2-205ENST00000461118 HSD17B3P37058 310 aa17.17■□□□□ 0.34
COL9A2-205ENST00000461118 NEK2P51955 445 aa17.17■□□□□ 0.34
COL9A2-205ENST00000461118 RAP1GDS1P52306 607 aa17.17■□□□□ 0.34
COL9A2-205ENST00000461118 TAS2R50P59544 299 aa17.17■□□□□ 0.34
COL9A2-205ENST00000461118 SLAMF1Q13291 335 aa17.17■□□□□ 0.34
COL9A2-205ENST00000461118 ARMC10Q8N2F6 343 aa17.17■□□□□ 0.34
COL9A2-205ENST00000461118 APCDD1LQ8NCL9 501 aa17.17■□□□□ 0.34
COL9A2-205ENST00000461118 OR4F6Q8NGB9 312 aa17.17■□□□□ 0.34
COL9A2-205ENST00000461118 DDX31Q9H8H2 851 aaKnown RBP17.17■□□□□ 0.34
COL9A2-205ENST00000461118 VTI1BQ9UEU0 232 aa17.17■□□□□ 0.34
COL9A2-205ENST00000461118 A0A1B0GTL3 188 aa17.16■□□□□ 0.34
COL9A2-205ENST00000461118 A8MUA0 341 aa17.16■□□□□ 0.34
COL9A2-205ENST00000461118 PPP6CO00743 305 aa17.16■□□□□ 0.34
COL9A2-205ENST00000461118 SLU7O95391 586 aaKnown RBP17.16■□□□□ 0.34
COL9A2-205ENST00000461118 ETHE1O95571 254 aa17.16■□□□□ 0.34
COL9A2-205ENST00000461118 IMPDH1P20839 514 aa17.16■□□□□ 0.34
COL9A2-205ENST00000461118 BSGP35613 385 aa17.16■□□□□ 0.34
COL9A2-205ENST00000461118 ARL1P40616 181 aaPredicted RBP17.16■□□□□ 0.34
COL9A2-205ENST00000461118 GPR143P51810 404 aa17.16■□□□□ 0.34
COL9A2-205ENST00000461118 PRKAA2P54646 552 aa17.16■□□□□ 0.34
COL9A2-205ENST00000461118 CDH13P55290 713 aa17.16■□□□□ 0.34
COL9A2-205ENST00000461118 VSNL1P62760 191 aa17.16■□□□□ 0.34
COL9A2-205ENST00000461118 CLCQ05315 142 aa17.16■□□□□ 0.34
COL9A2-205ENST00000461118 UNC50Q53HI1 259 aa17.16■□□□□ 0.34
COL9A2-205ENST00000461118 ZNF678Q5SXM1 525 aa17.16■□□□□ 0.34
COL9A2-205ENST00000461118 FCRLBQ6BAA4 426 aa17.16■□□□□ 0.34
COL9A2-205ENST00000461118 WDR93Q6P2C0 686 aa17.16■□□□□ 0.34
COL9A2-205ENST00000461118 RPS19BP1Q86WX3 136 aaKnown RBP17.16■□□□□ 0.34
COL9A2-205ENST00000461118 SLC22A9Q8IVM8 553 aa17.16■□□□□ 0.34
COL9A2-205ENST00000461118 BEST3Q8N1M1 668 aa17.16■□□□□ 0.34
COL9A2-205ENST00000461118 B3GNT7Q8NFL0 401 aa17.16■□□□□ 0.34
COL9A2-205ENST00000461118 CCDC120Q96HB5 630 aa17.16■□□□□ 0.34
COL9A2-205ENST00000461118 SERPINI1Q99574 410 aa17.16■□□□□ 0.34
COL9A2-205ENST00000461118 SORBS1Q9BX66 1292 aaKnown RBP17.16■□□□□ 0.34
COL9A2-205ENST00000461118 ALOXE3Q9BYJ1 711 aa17.16■□□□□ 0.34
COL9A2-205ENST00000461118 ADAP2Q9NPF8 381 aa17.16■□□□□ 0.34
COL9A2-205ENST00000461118 ABI3Q9P2A4 366 aa17.16■□□□□ 0.34
COL9A2-205ENST00000461118 ZNF225Q9UK10 706 aa17.16■□□□□ 0.34
COL9A2-205ENST00000461118 FBXW2Q9UKT8 454 aa17.16■□□□□ 0.34
COL9A2-205ENST00000461118 PCDHGB6Q9Y5F9 930 aa17.16■□□□□ 0.34
COL9A2-205ENST00000461118 CCDC168Q8NDH2 2452 aa17.15■□□□□ 0.34
COL9A2-205ENST00000461118 CDH16O75309 829 aa17.15■□□□□ 0.34
COL9A2-205ENST00000461118 MYO1DO94832 1006 aa17.15■□□□□ 0.34
COL9A2-205ENST00000461118 SEMA3DO95025 777 aa17.15■□□□□ 0.34
COL9A2-205ENST00000461118 CPN2P22792 545 aa17.15■□□□□ 0.34
COL9A2-205ENST00000461118 MST1P26927 711 aa17.15■□□□□ 0.34
COL9A2-205ENST00000461118 SRSF11Q05519 484 aaKnown RBP17.15■□□□□ 0.34
COL9A2-205ENST00000461118 STX4Q12846 297 aa17.15■□□□□ 0.34
COL9A2-205ENST00000461118 IFT88Q13099 833 aa17.15■□□□□ 0.34
COL9A2-205ENST00000461118 BIKQ13323 160 aa17.15■□□□□ 0.34
COL9A2-205ENST00000461118 SERTAD2Q14140 314 aa17.15■□□□□ 0.34
COL9A2-205ENST00000461118 ELAVL1Q15717 326 aaKnown RBP17.15■□□□□ 0.34
COL9A2-205ENST00000461118 INAQ16352 499 aa17.15■□□□□ 0.34
COL9A2-205ENST00000461118 MRM1Q6IN84 353 aaKnown RBP17.15■□□□□ 0.34
COL9A2-205ENST00000461118 RPS27LQ71UM5 84 aaKnown RBP17.15■□□□□ 0.34
COL9A2-205ENST00000461118 GPR180Q86V85 440 aa17.15■□□□□ 0.34
COL9A2-205ENST00000461118 KIF2BQ8N4N8 673 aa17.15■□□□□ 0.34
COL9A2-205ENST00000461118 MTFMTQ96DP5 389 aaKnown RBP17.15■□□□□ 0.34
COL9A2-205ENST00000461118 LURAP1Q96LR2 239 aa17.15■□□□□ 0.34
COL9A2-205ENST00000461118 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.15■□□□□ 0.34
COL9A2-205ENST00000461118 PNO1Q9NRX1 252 aaKnown RBP17.15■□□□□ 0.34
COL9A2-205ENST00000461118 TRPS1Q9UHF7 1281 aa17.15■□□□□ 0.34
COL9A2-205ENST00000461118 PHF11Q9UIL8 331 aa17.15■□□□□ 0.34
COL9A2-205ENST00000461118 EMCNQ9ULC0 261 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms