RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 PRLHRP49683 370 aa14.72□□□□□ -0.05
LMNB1-203ENST00000460265 DAB2P98082 770 aa14.72□□□□□ -0.05
LMNB1-203ENST00000460265 TOP3AQ13472 1001 aaPredicted RBP14.72□□□□□ -0.05
LMNB1-203ENST00000460265 HNRNPA1L2Q32P51 320 aaKnown RBP14.72□□□□□ -0.05
LMNB1-203ENST00000460265 SPIN4Q56A73 249 aa14.72□□□□□ -0.05
LMNB1-203ENST00000460265 DEF8Q6ZN54 512 aa14.72□□□□□ -0.05
LMNB1-203ENST00000460265 ZNF551Q7Z340 670 aaPredicted RBP14.72□□□□□ -0.05
LMNB1-203ENST00000460265 RIMKLAQ8IXN7 391 aa14.72□□□□□ -0.05
LMNB1-203ENST00000460265 CFHR5Q9BXR6 569 aa14.72□□□□□ -0.05
LMNB1-203ENST00000460265 TMEM245Q9H330 911 aa14.72□□□□□ -0.05
LMNB1-203ENST00000460265 SERHLQ9NQF3 203 aa14.72□□□□□ -0.05
LMNB1-203ENST00000460265 ERVK-18Q9QC07 812 aa14.72□□□□□ -0.05
LMNB1-203ENST00000460265 DUSP12Q9UNI6 340 aa14.72□□□□□ -0.05
LMNB1-203ENST00000460265 SH2B3Q9UQQ2 575 aa14.72□□□□□ -0.05
LMNB1-203ENST00000460265 POLHQ9Y253 713 aa14.72□□□□□ -0.05
LMNB1-203ENST00000460265 AP3D1O14617 1153 aa14.72□□□□□ -0.05
LMNB1-203ENST00000460265 NOS1APO75052 506 aaPredicted RBP14.72□□□□□ -0.05
LMNB1-203ENST00000460265 SEMA3DO95025 777 aa14.72□□□□□ -0.05
LMNB1-203ENST00000460265 KCNK5O95279 499 aa14.72□□□□□ -0.05
LMNB1-203ENST00000460265 YES1P07947 543 aa14.72□□□□□ -0.05
LMNB1-203ENST00000460265 DNAJA1P31689 397 aaKnown RBP14.72□□□□□ -0.05
LMNB1-203ENST00000460265 HTR3AP46098 478 aa14.72□□□□□ -0.05
LMNB1-203ENST00000460265 C19orf57Q0VDD7 668 aa14.72□□□□□ -0.05
LMNB1-203ENST00000460265 SCARB2Q14108 478 aa14.72□□□□□ -0.05
LMNB1-203ENST00000460265 PDGFRLQ15198 375 aa14.72□□□□□ -0.05
LMNB1-203ENST00000460265 TPRG1LQ5T0D9 272 aa14.72□□□□□ -0.05
LMNB1-203ENST00000460265 GCNT6Q5T4J0 391 aa14.72□□□□□ -0.05
LMNB1-203ENST00000460265 FAM109BQ6ICB4 259 aaPredicted RBP14.72□□□□□ -0.05
LMNB1-203ENST00000460265 GRHL2Q6ISB3 625 aa14.72□□□□□ -0.05
LMNB1-203ENST00000460265 ADGRD2Q7Z7M1 963 aa14.72□□□□□ -0.05
LMNB1-203ENST00000460265 BBS4Q96RK4 519 aa14.72□□□□□ -0.05
LMNB1-203ENST00000460265 B3GNT4Q9C0J1 378 aa14.72□□□□□ -0.05
LMNB1-203ENST00000460265 NARFLQ9H6Q4 476 aa14.72□□□□□ -0.05
LMNB1-203ENST00000460265 EQTNQ9NQ60 294 aa14.72□□□□□ -0.05
LMNB1-203ENST00000460265 SLC13A4Q9UKG4 626 aa14.72□□□□□ -0.05
LMNB1-203ENST00000460265 ARID1BQ8NFD5 2236 aaPredicted RBP14.72□□□□□ -0.05
LMNB1-203ENST00000460265 EFCAB9A8MZ26 197 aa14.72□□□□□ -0.05
LMNB1-203ENST00000460265 ISM1B1AKI9 464 aa14.72□□□□□ -0.05
LMNB1-203ENST00000460265 M0R129 80 aa14.72□□□□□ -0.05
LMNB1-203ENST00000460265 RFXAPO00287 272 aa14.72□□□□□ -0.05
LMNB1-203ENST00000460265 HAT1O14929 419 aa14.72□□□□□ -0.05
LMNB1-203ENST00000460265 EFEMP2O95967 443 aa14.72□□□□□ -0.05
LMNB1-203ENST00000460265 NPPBP16860 134 aa14.72□□□□□ -0.05
LMNB1-203ENST00000460265 IL12RB1P42701 662 aa14.72□□□□□ -0.05
LMNB1-203ENST00000460265 TAP2Q03519 686 aa14.72□□□□□ -0.05
LMNB1-203ENST00000460265 TMEM240Q5SV17 173 aa14.72□□□□□ -0.05
LMNB1-203ENST00000460265 FAM205BPQ63HN1 556 aa14.72□□□□□ -0.05
LMNB1-203ENST00000460265 IDO2Q6ZQW0 420 aa14.72□□□□□ -0.05
LMNB1-203ENST00000460265 STX19Q8N4C7 294 aa14.72□□□□□ -0.05
LMNB1-203ENST00000460265 WFIKKN2Q8TEU8 576 aa14.72□□□□□ -0.05
LMNB1-203ENST00000460265 MRGPRX3Q96LB0 322 aa14.72□□□□□ -0.05
LMNB1-203ENST00000460265 MAGEB10Q96LZ2 347 aaPredicted RBP14.72□□□□□ -0.05
LMNB1-203ENST00000460265 REEP4Q9H6H4 257 aa14.72□□□□□ -0.05
LMNB1-203ENST00000460265 SLC1A7O00341 560 aa14.71□□□□□ -0.05
LMNB1-203ENST00000460265 GFRA2O00451 464 aa14.71□□□□□ -0.05
LMNB1-203ENST00000460265 SCO1O75880 301 aa14.71□□□□□ -0.05
LMNB1-203ENST00000460265 RETP07949 1114 aa14.71□□□□□ -0.05
LMNB1-203ENST00000460265 EPHA2P29317 976 aa14.71□□□□□ -0.05
LMNB1-203ENST00000460265 LBX1P52954 281 aa14.71□□□□□ -0.05
LMNB1-203ENST00000460265 RFX4Q33E94 735 aa14.71□□□□□ -0.05
LMNB1-203ENST00000460265 COX20Q5RI15 118 aa14.71□□□□□ -0.05
LMNB1-203ENST00000460265 PHOX2BQ99453 314 aa14.71□□□□□ -0.05
LMNB1-203ENST00000460265 AIF1LQ9BQI0 150 aa14.71□□□□□ -0.05
LMNB1-203ENST00000460265 ATP13A2Q9NQ11 1180 aa14.71□□□□□ -0.05
LMNB1-203ENST00000460265 PRDM8Q9NQV8 689 aa14.71□□□□□ -0.05
LMNB1-203ENST00000460265 ZC4H2Q9NQZ6 224 aa14.71□□□□□ -0.05
LMNB1-203ENST00000460265 AGAP5A6NIR3 686 aa14.71□□□□□ -0.05
LMNB1-203ENST00000460265 AGAP14A8MT82 685 aa14.71□□□□□ -0.05
LMNB1-203ENST00000460265 DNAJB5O75953 348 aa14.71□□□□□ -0.05
LMNB1-203ENST00000460265 PSMA3P25788 255 aa14.71□□□□□ -0.05
LMNB1-203ENST00000460265 UQCRC1P31930 480 aa14.71□□□□□ -0.05
LMNB1-203ENST00000460265 FLCNQ8NFG4 579 aa14.71□□□□□ -0.05
LMNB1-203ENST00000460265 TESCQ96BS2 214 aa14.71□□□□□ -0.05
LMNB1-203ENST00000460265 CEP19Q96LK0 163 aa14.71□□□□□ -0.05
LMNB1-203ENST00000460265 AIFM2Q9BRQ8 373 aa14.71□□□□□ -0.05
LMNB1-203ENST00000460265 SLIRPQ9GZT3 109 aaKnown RBP14.71□□□□□ -0.05
LMNB1-203ENST00000460265 SPNS1Q9H2V7 528 aa14.71□□□□□ -0.05
LMNB1-203ENST00000460265 C14orf119Q9NWQ9 140 aa14.71□□□□□ -0.05
LMNB1-203ENST00000460265 VNN3Q9NY84 501 aa14.71□□□□□ -0.05
LMNB1-203ENST00000460265 TAS2R9Q9NYW1 312 aa14.71□□□□□ -0.05
LMNB1-203ENST00000460265 EHD3Q9NZN3 535 aa14.71□□□□□ -0.05
LMNB1-203ENST00000460265 FBXW2Q9UKT8 454 aa14.71□□□□□ -0.05
LMNB1-203ENST00000460265 SSX4O60224 188 aa14.71□□□□□ -0.06
LMNB1-203ENST00000460265 PSIP1O75475 530 aaKnown RBP14.71□□□□□ -0.06
LMNB1-203ENST00000460265 C8orf89P0DMQ9 161 aa14.71□□□□□ -0.06
LMNB1-203ENST00000460265 CDK6Q00534 326 aa14.71□□□□□ -0.06
LMNB1-203ENST00000460265 RGNQ15493 299 aa14.71□□□□□ -0.06
LMNB1-203ENST00000460265 FAM46CQ5VWP2 391 aa14.71□□□□□ -0.06
LMNB1-203ENST00000460265 TANGO2Q6ICL3 276 aa14.71□□□□□ -0.06
LMNB1-203ENST00000460265 SLCO4C1Q6ZQN7 724 aa14.71□□□□□ -0.06
LMNB1-203ENST00000460265 LRRTM4Q86VH4 590 aa14.71□□□□□ -0.06
LMNB1-203ENST00000460265 CPA6Q8N4T0 437 aa14.71□□□□□ -0.06
LMNB1-203ENST00000460265 TMEM145Q8NBT3 493 aa14.71□□□□□ -0.06
LMNB1-203ENST00000460265 DNAJB8Q8NHS0 232 aa14.71□□□□□ -0.06
LMNB1-203ENST00000460265 SMARCD2Q92925 531 aa14.71□□□□□ -0.06
LMNB1-203ENST00000460265 RSPRY1Q96DX4 576 aa14.71□□□□□ -0.06
LMNB1-203ENST00000460265 LRIG1Q96JA1 1093 aa14.71□□□□□ -0.06
LMNB1-203ENST00000460265 ZNF282Q9UDV7 671 aaPredicted RBP14.71□□□□□ -0.06
LMNB1-203ENST00000460265 PLXNA3P51805 1871 aa14.71□□□□□ -0.06
LMNB1-203ENST00000460265 IGLV3-16A0A075B6K0 115 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms