RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 PCDH7O60245 1069 aa15.03■□□□□ -0
USP39-205ENST00000442708 FGF17O60258 216 aa15.03■□□□□ -0
USP39-205ENST00000442708 RSL1D1O76021 490 aaKnown RBP15.03■□□□□ -0
USP39-205ENST00000442708 SEC24DO94855 1032 aaPredicted RBP15.03■□□□□ -0
USP39-205ENST00000442708 HPP00738 406 aa15.03■□□□□ -0
USP39-205ENST00000442708 CELA2AP08217 269 aa15.03■□□□□ -0
USP39-205ENST00000442708 FAM87AP0C7U9 286 aa15.03■□□□□ -0
USP39-205ENST00000442708 PRPH2P23942 346 aa15.03■□□□□ -0
USP39-205ENST00000442708 MAPK12P53778 367 aa15.03■□□□□ -0
USP39-205ENST00000442708 OCRLQ01968 901 aa15.03■□□□□ -0
USP39-205ENST00000442708 RHDQ02161 417 aa15.03■□□□□ -0
USP39-205ENST00000442708 ACSM2AQ08AH3 577 aa15.03■□□□□ -0
USP39-205ENST00000442708 SLC13A2Q13183 592 aa15.03■□□□□ -0
USP39-205ENST00000442708 SPIN4Q56A73 249 aa15.03■□□□□ -0
USP39-205ENST00000442708 SFT2D3Q587I9 215 aa15.03■□□□□ -0
USP39-205ENST00000442708 XKR7Q5GH72 579 aa15.03■□□□□ -0
USP39-205ENST00000442708 ACSM2BQ68CK6 577 aa15.03■□□□□ -0
USP39-205ENST00000442708 GALNT18Q6P9A2 607 aa15.03■□□□□ -0
USP39-205ENST00000442708 OR4N5Q8IXE1 308 aa15.03■□□□□ -0
USP39-205ENST00000442708 DDIASQ8IXT1 998 aa15.03■□□□□ -0
USP39-205ENST00000442708 EXD3Q8N9H8 876 aa15.03■□□□□ -0
USP39-205ENST00000442708 RAB3IL1Q8TBN0 382 aa15.03■□□□□ -0
USP39-205ENST00000442708 METTL21AQ8WXB1 218 aa15.03■□□□□ -0
USP39-205ENST00000442708 IMMP1LQ96LU5 166 aa15.03■□□□□ -0
USP39-205ENST00000442708 ILKAPQ9H0C8 392 aaPredicted RBP15.03■□□□□ -0
USP39-205ENST00000442708 MS4A12Q9NXJ0 267 aa15.03■□□□□ -0
USP39-205ENST00000442708 MCM8Q9UJA3 840 aa15.03■□□□□ -0
USP39-205ENST00000442708 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.03■□□□□ -0
USP39-205ENST00000442708 ATP6AP2A0A1C7CYW4 349 aa15.02■□□□□ -0
USP39-205ENST00000442708 A8MUA0 341 aa15.02■□□□□ -0
USP39-205ENST00000442708 CLDN4O14493 209 aa15.02■□□□□ -0
USP39-205ENST00000442708 RGS14O43566 566 aa15.02■□□□□ -0
USP39-205ENST00000442708 CTNSO60931 367 aa15.02■□□□□ -0
USP39-205ENST00000442708 ATP6AP2O75787 350 aa15.02■□□□□ -0
USP39-205ENST00000442708 CHEK2O96017 543 aa15.02■□□□□ -0
USP39-205ENST00000442708 NR2F6P10588 404 aa15.02■□□□□ -0
USP39-205ENST00000442708 NR1D1P20393 614 aa15.02■□□□□ -0
USP39-205ENST00000442708 TIA1P31483 386 aaKnown RBP eCLIP15.02■□□□□ -0
USP39-205ENST00000442708 RPL14P50914 215 aaKnown RBP15.02■□□□□ -0
USP39-205ENST00000442708 CCL11P51671 97 aa15.02■□□□□ -0
USP39-205ENST00000442708 POLE2P56282 527 aa15.02■□□□□ -0
USP39-205ENST00000442708 OR4D2P58180 307 aa15.02■□□□□ -0
USP39-205ENST00000442708 NR6A1Q15406 480 aa15.02■□□□□ -0
USP39-205ENST00000442708 RFTN2Q52LD8 501 aaPredicted RBP15.02■□□□□ -0
USP39-205ENST00000442708 NDUFAF5Q5TEU4 345 aa15.02■□□□□ -0
USP39-205ENST00000442708 NDUFAF7Q7L592 441 aa15.02■□□□□ -0
USP39-205ENST00000442708 TMEM102Q8N9M5 508 aaPredicted RBP15.02■□□□□ -0
USP39-205ENST00000442708 RPF2Q9H7B2 306 aaKnown RBP15.02■□□□□ -0
USP39-205ENST00000442708 LRTM1Q9HBL6 345 aa15.02■□□□□ -0
USP39-205ENST00000442708 THAP1Q9NVV9 213 aa15.02■□□□□ -0
USP39-205ENST00000442708 C1orf109Q9NX04 203 aa15.02■□□□□ -0
USP39-205ENST00000442708 MRPS33Q9Y291 106 aaKnown RBP15.02■□□□□ -0
USP39-205ENST00000442708 DLGAP4Q9Y2H0 992 aa15.02■□□□□ -0
USP39-205ENST00000442708 POLR3HQ9Y535 204 aaPredicted RBP15.02■□□□□ -0
USP39-205ENST00000442708 NSG1A0A0A6YYJ2 146 aa15.01□□□□□ -0.01
USP39-205ENST00000442708 A6NL46 340 aa15.01□□□□□ -0.01
USP39-205ENST00000442708 K7EM74 188 aa15.01□□□□□ -0.01
USP39-205ENST00000442708 KLF11O14901 512 aa15.01□□□□□ -0.01
USP39-205ENST00000442708 PCDH17O14917 1159 aa15.01□□□□□ -0.01
USP39-205ENST00000442708 SEC22BO75396 215 aa15.01□□□□□ -0.01
USP39-205ENST00000442708 TACR1P25103 407 aa15.01□□□□□ -0.01
USP39-205ENST00000442708 BUD31P41223 144 aaPredicted RBP15.01□□□□□ -0.01
USP39-205ENST00000442708 RRADP55042 308 aa15.01□□□□□ -0.01
USP39-205ENST00000442708 TAS2R50P59544 299 aa15.01□□□□□ -0.01
USP39-205ENST00000442708 IGLV3-21P80748 117 aaPredicted RBP15.01□□□□□ -0.01
USP39-205ENST00000442708 FOLH1Q04609 750 aa15.01□□□□□ -0.01
USP39-205ENST00000442708 PDCD2Q16342 344 aaPredicted RBP15.01□□□□□ -0.01
USP39-205ENST00000442708 ATG16L1Q676U5 607 aa15.01□□□□□ -0.01
USP39-205ENST00000442708 NOXRED1Q6NXP6 359 aa15.01□□□□□ -0.01
USP39-205ENST00000442708 DGAT2L6Q6ZPD8 337 aa15.01□□□□□ -0.01
USP39-205ENST00000442708 TRIM42Q8IWZ5 723 aa15.01□□□□□ -0.01
USP39-205ENST00000442708 PARP9Q8IXQ6 854 aa15.01□□□□□ -0.01
USP39-205ENST00000442708 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.01□□□□□ -0.01
USP39-205ENST00000442708 DNAJB14Q8TBM8 379 aa15.01□□□□□ -0.01
USP39-205ENST00000442708 C16orf78Q8WTQ4 265 aa15.01□□□□□ -0.01
USP39-205ENST00000442708 TANKQ92844 425 aa15.01□□□□□ -0.01
USP39-205ENST00000442708 FCRL1Q96LA6 429 aa15.01□□□□□ -0.01
USP39-205ENST00000442708 PPP1R36Q96LQ0 422 aa15.01□□□□□ -0.01
USP39-205ENST00000442708 FER1L6-AS2Q96M78 137 aa15.01□□□□□ -0.01
USP39-205ENST00000442708 ALOXE3Q9BYJ1 711 aa15.01□□□□□ -0.01
USP39-205ENST00000442708 C5AR2Q9P296 337 aa15.01□□□□□ -0.01
USP39-205ENST00000442708 HEY2Q9UBP5 337 aa15.01□□□□□ -0.01
USP39-205ENST00000442708 PCDHA9Q9Y5H5 950 aa15.01□□□□□ -0.01
USP39-205ENST00000442708 SPACA6W5XKT8 324 aa15.01□□□□□ -0.01
USP39-205ENST00000442708 CROCCQ5TZA2 2017 aa15□□□□□ -0.01
USP39-205ENST00000442708 GNG14A0A1W2PPG7 69 aa15□□□□□ -0.01
USP39-205ENST00000442708 ERVH48-1M5A8F1 160 aa15□□□□□ -0.01
USP39-205ENST00000442708 ATP8B1O43520 1251 aa15□□□□□ -0.01
USP39-205ENST00000442708 PEX11AO75192 247 aa15□□□□□ -0.01
USP39-205ENST00000442708 CEACAM4O75871 244 aa15□□□□□ -0.01
USP39-205ENST00000442708 SNUPNO95149 360 aaKnown RBP15□□□□□ -0.01
USP39-205ENST00000442708 IL3P08700 152 aa15□□□□□ -0.01
USP39-205ENST00000442708 ANXA4P09525 319 aaPredicted RBP15□□□□□ -0.01
USP39-205ENST00000442708 TLX1P31314 330 aaPredicted RBP15□□□□□ -0.01
USP39-205ENST00000442708 HK2P52789 917 aa15□□□□□ -0.01
USP39-205ENST00000442708 TRA2BP62995 288 aaKnown RBP15□□□□□ -0.01
USP39-205ENST00000442708 AIMP2Q13155 320 aaKnown RBP15□□□□□ -0.01
USP39-205ENST00000442708 RAPSNQ13702 412 aa15□□□□□ -0.01
USP39-205ENST00000442708 PRSS53Q2L4Q9 553 aa15□□□□□ -0.01
USP39-205ENST00000442708 ZNF750Q32MQ0 723 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms