RNA–Protein interactions for RNA: ENST00000417521.5

DDR1-231, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-231ENST00000417521 WDR91A4D1P6 747 aa15.32■□□□□ 0.04
DDR1-231ENST00000417521 HMGB1P1B2RPK0 211 aaPredicted RBP15.32■□□□□ 0.04
DDR1-231ENST00000417521 PRAMEF2O60811 474 aa15.32■□□□□ 0.04
DDR1-231ENST00000417521 CTNSO60931 367 aa15.32■□□□□ 0.04
DDR1-231ENST00000417521 BPGMP07738 259 aa15.32■□□□□ 0.04
DDR1-231ENST00000417521 HIST1H1TP22492 207 aaPredicted RBP15.32■□□□□ 0.04
DDR1-231ENST00000417521 ATP5A1P25705 553 aaKnown RBP15.32■□□□□ 0.04
DDR1-231ENST00000417521 SERPINB4P48594 390 aa15.32■□□□□ 0.04
DDR1-231ENST00000417521 ARFIP1P53367 373 aa15.32■□□□□ 0.04
DDR1-231ENST00000417521 DNAJB13P59910 316 aa15.32■□□□□ 0.04
DDR1-231ENST00000417521 CLCQ05315 142 aa15.32■□□□□ 0.04
DDR1-231ENST00000417521 SLC13A2Q13183 592 aa15.32■□□□□ 0.04
DDR1-231ENST00000417521 ELOAQ14241 798 aaKnown RBP15.32■□□□□ 0.04
DDR1-231ENST00000417521 AP5B1Q2VPB7 878 aa15.32■□□□□ 0.04
DDR1-231ENST00000417521 LIPMQ5VYY2 423 aa15.32■□□□□ 0.04
DDR1-231ENST00000417521 FAM219BQ5XKK7 198 aa15.32■□□□□ 0.04
DDR1-231ENST00000417521 FAM180AQ6UWF9 173 aa15.32■□□□□ 0.04
DDR1-231ENST00000417521 ZNF793Q6ZN11 406 aa15.32■□□□□ 0.04
DDR1-231ENST00000417521 RPS19BP1Q86WX3 136 aaKnown RBP15.32■□□□□ 0.04
DDR1-231ENST00000417521 MYLK4Q86YV6 388 aaPredicted RBP15.32■□□□□ 0.04
DDR1-231ENST00000417521 BEST3Q8N1M1 668 aa15.32■□□□□ 0.04
DDR1-231ENST00000417521 ACOT4Q8N9L9 421 aa15.32■□□□□ 0.04
DDR1-231ENST00000417521 FAM47BQ8NA70 645 aa15.32■□□□□ 0.04
DDR1-231ENST00000417521 TMEM52Q8NDY8 209 aa15.32■□□□□ 0.04
DDR1-231ENST00000417521 HUS1BQ8NHY5 278 aa15.32■□□□□ 0.04
DDR1-231ENST00000417521 MGARPQ8TDB4 240 aa15.32■□□□□ 0.04
DDR1-231ENST00000417521 TRPC4APQ8TEL6 797 aa15.32■□□□□ 0.04
DDR1-231ENST00000417521 NPAS2Q99743 824 aa15.32■□□□□ 0.04
DDR1-231ENST00000417521 CENPKQ9BS16 269 aa15.32■□□□□ 0.04
DDR1-231ENST00000417521 GSTO2Q9H4Y5 243 aa15.32■□□□□ 0.04
DDR1-231ENST00000417521 PSD3Q9NYI0 1048 aa15.32■□□□□ 0.04
DDR1-231ENST00000417521 PPIEQ9UNP9 301 aaKnown RBP15.32■□□□□ 0.04
DDR1-231ENST00000417521 PCDHGB6Q9Y5F9 930 aa15.32■□□□□ 0.04
DDR1-231ENST00000417521 USP9XQ93008 2570 aaPredicted RBP15.31■□□□□ 0.04
DDR1-231ENST00000417521 BLACEA4D250 179 aa15.31■□□□□ 0.04
DDR1-231ENST00000417521 TRIM13O60858 407 aa15.31■□□□□ 0.04
DDR1-231ENST00000417521 AGFG2O95081 481 aa15.31■□□□□ 0.04
DDR1-231ENST00000417521 DHRS4L1P0CG22 281 aa15.31■□□□□ 0.04
DDR1-231ENST00000417521 PTX3P26022 381 aaPredicted RBP15.31■□□□□ 0.04
DDR1-231ENST00000417521 ARL1P40616 181 aaPredicted RBP15.31■□□□□ 0.04
DDR1-231ENST00000417521 HNRNPFP52597 415 aaKnown RBP15.31■□□□□ 0.04
DDR1-231ENST00000417521 WDR4P57081 412 aaKnown RBP15.31■□□□□ 0.04
DDR1-231ENST00000417521 PHEXP78562 749 aa15.31■□□□□ 0.04
DDR1-231ENST00000417521 TRAF3Q13114 568 aa15.31■□□□□ 0.04
DDR1-231ENST00000417521 OR4C11Q6IEV9 310 aa15.31■□□□□ 0.04
DDR1-231ENST00000417521 ZCCHC23Q6ZST2 131 aa15.31■□□□□ 0.04
DDR1-231ENST00000417521 C7orf57Q8NEG2 295 aa15.31■□□□□ 0.04
DDR1-231ENST00000417521 PRR7Q8TB68 274 aa15.31■□□□□ 0.04
DDR1-231ENST00000417521 ATP6V1E2Q96A05 226 aa15.31■□□□□ 0.04
DDR1-231ENST00000417521 RGMAQ96B86 450 aa15.31■□□□□ 0.04
DDR1-231ENST00000417521 PAIP2Q9BPZ3 127 aaKnown RBP15.31■□□□□ 0.04
DDR1-231ENST00000417521 UTP23Q9BRU9 249 aaKnown RBP15.31■□□□□ 0.04
DDR1-231ENST00000417521 GATA5Q9BWX5 397 aaPredicted RBP15.31■□□□□ 0.04
DDR1-231ENST00000417521 OR51B5Q9H339 312 aa15.31■□□□□ 0.04
DDR1-231ENST00000417521 CDCP1Q9H5V8 836 aa15.31■□□□□ 0.04
DDR1-231ENST00000417521 DMRT3Q9NQL9 472 aa15.31■□□□□ 0.04
DDR1-231ENST00000417521 RNF11Q9Y3C5 154 aa15.31■□□□□ 0.04
DDR1-231ENST00000417521 SPACA6W5XKT8 324 aa15.31■□□□□ 0.04
DDR1-231ENST00000417521 NUP210LQ5VU65 1888 aa15.31■□□□□ 0.04
DDR1-231ENST00000417521 A8MUA0 341 aa15.3■□□□□ 0.04
DDR1-231ENST00000417521 RTCAO00442 366 aaKnown RBP15.3■□□□□ 0.04
DDR1-231ENST00000417521 CLDN9O95484 217 aa15.3■□□□□ 0.04
DDR1-231ENST00000417521 EDN3P14138 238 aa15.3■□□□□ 0.04
DDR1-231ENST00000417521 CD96P40200 585 aa15.3■□□□□ 0.04
DDR1-231ENST00000417521 SSR2P43308 183 aa15.3■□□□□ 0.04
DDR1-231ENST00000417521 CCNG1P51959 295 aa15.3■□□□□ 0.04
DDR1-231ENST00000417521 TUBA3CQ13748 450 aa15.3■□□□□ 0.04
DDR1-231ENST00000417521 DDX39BQ13838 428 aaKnown RBP15.3■□□□□ 0.04
DDR1-231ENST00000417521 CPSF6Q16630 551 aaKnown RBP eCLIP15.3■□□□□ 0.04
DDR1-231ENST00000417521 CFAP157Q5JU67 520 aa15.3■□□□□ 0.04
DDR1-231ENST00000417521 HHATQ5VTY9 493 aa15.3■□□□□ 0.04
DDR1-231ENST00000417521 TUBA3EQ6PEY2 450 aa15.3■□□□□ 0.04
DDR1-231ENST00000417521 ARMC10Q8N2F6 343 aa15.3■□□□□ 0.04
DDR1-231ENST00000417521 KIF2BQ8N4N8 673 aa15.3■□□□□ 0.04
DDR1-231ENST00000417521 APCDD1LQ8NCL9 501 aa15.3■□□□□ 0.04
DDR1-231ENST00000417521 B3GNT7Q8NFL0 401 aa15.3■□□□□ 0.04
DDR1-231ENST00000417521 DNAJB8Q8NHS0 232 aa15.3■□□□□ 0.04
DDR1-231ENST00000417521 TAAR6Q96RI8 345 aa15.3■□□□□ 0.04
DDR1-231ENST00000417521 CSF3RQ99062 836 aa15.3■□□□□ 0.04
DDR1-231ENST00000417521 MTERF1Q99551 399 aaKnown RBP15.3■□□□□ 0.04
DDR1-231ENST00000417521 MAPKAP1Q9BPZ7 522 aa15.3■□□□□ 0.04
DDR1-231ENST00000417521 SLX1AQ9BQ83 275 aa15.3■□□□□ 0.04
DDR1-231ENST00000417521 NTMT1Q9BV86 223 aa15.3■□□□□ 0.04
DDR1-231ENST00000417521 DEFB126Q9BYW3 111 aa15.3■□□□□ 0.04
DDR1-231ENST00000417521 PNO1Q9NRX1 252 aaKnown RBP15.3■□□□□ 0.04
DDR1-231ENST00000417521 OLAHQ9NV23 265 aa15.3■□□□□ 0.04
DDR1-231ENST00000417521 NKIRAS1Q9NYS0 192 aa15.3■□□□□ 0.04
DDR1-231ENST00000417521 DOCK10Q96BY6 2186 aa15.3■□□□□ 0.04
DDR1-231ENST00000417521 SCN3AQ9NY46 2000 aa15.29■□□□□ 0.04
DDR1-231ENST00000417521 COL12A1Q99715 3063 aa15.29■□□□□ 0.04
DDR1-231ENST00000417521 GABRR3A8MPY1 467 aa15.29■□□□□ 0.04
DDR1-231ENST00000417521 TGFBR3LH3BV60 316 aa15.29■□□□□ 0.04
DDR1-231ENST00000417521 FOXE1O00358 373 aaPredicted RBP15.29■□□□□ 0.04
DDR1-231ENST00000417521 UBFD1O14562 309 aaKnown RBP15.29■□□□□ 0.04
DDR1-231ENST00000417521 ATP8B1O43520 1251 aa15.29■□□□□ 0.04
DDR1-231ENST00000417521 MAN1A2O60476 641 aa15.29■□□□□ 0.04
DDR1-231ENST00000417521 SEMA7AO75326 666 aa15.29■□□□□ 0.04
DDR1-231ENST00000417521 SH3BGRLO75368 114 aa15.29■□□□□ 0.04
DDR1-231ENST00000417521 MYO1DO94832 1006 aa15.29■□□□□ 0.04
DDR1-231ENST00000417521 RASAL1O95294 804 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms