RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 PPIEQ9UNP9 301 aaKnown RBP14.06□□□□□ -0.16
NCKIPSD-204ENST00000416649 A0A1B0GVC2 190 aa14.05□□□□□ -0.16
NCKIPSD-204ENST00000416649 A6NIN4 97 aa14.05□□□□□ -0.16
NCKIPSD-204ENST00000416649 E9PQ18 207 aa14.05□□□□□ -0.16
NCKIPSD-204ENST00000416649 HSDL2Q6YN16 418 aa14.05□□□□□ -0.16
NCKIPSD-204ENST00000416649 KRT74Q7RTS7 529 aa14.05□□□□□ -0.16
NCKIPSD-204ENST00000416649 TRIM46Q7Z4K8 759 aa14.05□□□□□ -0.16
NCKIPSD-204ENST00000416649 SPON2Q9BUD6 331 aa14.05□□□□□ -0.16
NCKIPSD-204ENST00000416649 SLAMF7Q9NQ25 335 aa14.05□□□□□ -0.16
NCKIPSD-204ENST00000416649 PCDHGC4Q9Y5F7 938 aa14.05□□□□□ -0.16
NCKIPSD-204ENST00000416649 RPS10-NUDT3A0A1W2PQS6 291 aa14.05□□□□□ -0.16
NCKIPSD-204ENST00000416649 GPX2P18283 190 aa14.05□□□□□ -0.16
NCKIPSD-204ENST00000416649 CLCNKAP51800 687 aa14.05□□□□□ -0.16
NCKIPSD-204ENST00000416649 RAB8AP61006 207 aa14.05□□□□□ -0.16
NCKIPSD-204ENST00000416649 CSTF1Q05048 431 aaKnown RBP14.05□□□□□ -0.16
NCKIPSD-204ENST00000416649 GPR139Q6DWJ6 353 aa14.05□□□□□ -0.16
NCKIPSD-204ENST00000416649 B3GLCTQ6Y288 498 aa14.05□□□□□ -0.16
NCKIPSD-204ENST00000416649 SPATA2LQ8IUW3 424 aaPredicted RBP14.05□□□□□ -0.16
NCKIPSD-204ENST00000416649 AP3S1Q92572 193 aa14.05□□□□□ -0.16
NCKIPSD-204ENST00000416649 SLC9A6Q92581 669 aa14.05□□□□□ -0.16
NCKIPSD-204ENST00000416649 IGSF8Q969P0 613 aa14.05□□□□□ -0.16
NCKIPSD-204ENST00000416649 FAM126AQ9BYI3 521 aaPredicted RBP14.05□□□□□ -0.16
NCKIPSD-204ENST00000416649 SAV1Q9H4B6 383 aaPredicted RBP14.05□□□□□ -0.16
NCKIPSD-204ENST00000416649 ZFP64Q9NPA5 681 aa14.05□□□□□ -0.16
NCKIPSD-204ENST00000416649 WASH6PQ9NQA3 447 aa14.05□□□□□ -0.16
NCKIPSD-204ENST00000416649 SPATA2Q9UM82 520 aa14.05□□□□□ -0.16
NCKIPSD-204ENST00000416649 SLC9A8Q9Y2E8 581 aa14.05□□□□□ -0.16
NCKIPSD-204ENST00000416649 RALGAPA2Q2PPJ7 1873 aa14.05□□□□□ -0.16
NCKIPSD-204ENST00000416649 A0A1W2PQH9 124 aa14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 SH3D21A4FU49 640 aa14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 TLR4O00206 839 aa14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 PCDH7O60245 1069 aa14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 IGLV3-25P01717 112 aa14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 CXCL3P19876 107 aa14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 AKR1D1P51857 326 aa14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 DCDC1P59894 354 aa14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 RPS25P62851 125 aaKnown RBP14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 TAF12Q16514 161 aa14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 NAGSQ8N159 534 aa14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 CELF5Q8N6W0 485 aaKnown RBP14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 CLDN22Q8N7P3 220 aa14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 OR11H7Q8NGC8 314 aa14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 RANBP3Q9H6Z4 567 aaPredicted RBP14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 HEXA-AS1Q9H8Q6 139 aa14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 BEX1Q9HBH7 125 aa14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 NUDT15Q9NV35 164 aa14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 LSM2Q9Y333 95 aaKnown RBP14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 SEC14L5O43304 696 aa14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 GADD45GO95257 159 aa14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 CLDN9O95484 217 aa14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 MPC2O95563 127 aa14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 GASTP01350 101 aa14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 RRASP10301 218 aa14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 HOXB9P17482 250 aaPredicted RBP14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 STOMP27105 288 aa14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 CRISP1P54107 249 aa14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 VSX2P58304 361 aaPredicted RBP14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 CRYZQ08257 329 aaKnown RBP14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 TUSC1Q2TAM9 212 aa14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 MPPE1Q53F39 396 aa14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 OR2G6Q5TZ20 316 aa14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 SHEQ5VZ18 495 aa14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 METTL2BQ6P1Q9 378 aaKnown RBP14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 WDR53Q7Z5U6 358 aaPredicted RBP14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 MRPL10Q7Z7H8 261 aaKnown RBP14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 TCEANCQ8N8B7 351 aa14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 LSM14AQ8ND56 463 aaKnown RBP14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 BEST4Q8NFU0 473 aa14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 MYEOVQ96EZ4 313 aa14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 TMEM43Q9BTV4 400 aa14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 PADI2Q9Y2J8 665 aa14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 CDH10Q9Y6N8 788 aa14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 SPEGQ15772 3267 aa14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 ZNF623O75123 536 aa14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 ATG13O75143 517 aa14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 PAHP00439 452 aa14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 PRPS2P11908 318 aa14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 ANXA3P12429 323 aa14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 RHOQP17081 205 aa14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 LPOP22079 712 aaPredicted RBP14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 ITGB7P26010 798 aa14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 RBBP4Q09028 425 aa14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 EFEMP1Q12805 493 aa14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 RIN1Q13671 783 aa14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 SF3A2Q15428 464 aaKnown RBP14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 ZNF628Q5EBL2 1059 aa14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 RNASE12Q5GAN4 147 aaKnown RBP14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 BICRALQ6AI39 1079 aa14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 SLC24A5Q71RS6 500 aa14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 GPAT4Q86UL3 456 aa14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 LAPTM4BQ86VI4 370 aa14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 TMEM173Q86WV6 379 aaPredicted RBP14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 TMEM86AQ8N2M4 240 aa14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 FAM46DQ8NEK8 389 aa14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 TTLQ8NG68 377 aa14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 OR10Z1Q8NGY1 313 aa14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 SKA2Q8WVK7 121 aaPredicted RBP14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 TSSK6Q9BXA6 273 aa14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 SH3BP4Q9P0V3 963 aa14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 CPNE7Q9UBL6 633 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms