RNA–Protein interactions for RNA: ENST00000409251.7

PTPRN-202, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 1 (best) BASIC

Gene PTPRN, Length 3,622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-202ENST00000409251 ZNF551Q7Z340 670 aaPredicted RBP12.39□□□□□ -0.43
PTPRN-202ENST00000409251 SFTPA1Q8IWL2 248 aa12.39□□□□□ -0.43
PTPRN-202ENST00000409251 HJURPQ8NCD3 748 aaPredicted RBP12.39□□□□□ -0.43
PTPRN-202ENST00000409251 CEP76Q8TAP6 659 aa12.39□□□□□ -0.43
PTPRN-202ENST00000409251 SCAMP4Q969E2 229 aa12.39□□□□□ -0.43
PTPRN-202ENST00000409251 BARHL1Q9BZE3 327 aa12.39□□□□□ -0.43
PTPRN-202ENST00000409251 ATP13A2Q9NQ11 1180 aa12.39□□□□□ -0.43
PTPRN-202ENST00000409251 KLHL1Q9NR64 748 aa12.39□□□□□ -0.43
PTPRN-202ENST00000409251 GLTPQ9NZD2 209 aa12.39□□□□□ -0.43
PTPRN-202ENST00000409251 RIMKLBQ9ULI2 386 aa12.39□□□□□ -0.43
PTPRN-202ENST00000409251 WASHC1A8K0Z3 465 aa12.39□□□□□ -0.43
PTPRN-202ENST00000409251 ETFAP13804 333 aa12.39□□□□□ -0.43
PTPRN-202ENST00000409251 ERP29P30040 261 aaKnown RBP12.39□□□□□ -0.43
PTPRN-202ENST00000409251 MAP2K3P46734 347 aa12.39□□□□□ -0.43
PTPRN-202ENST00000409251 ARHGDIBP52566 201 aa12.39□□□□□ -0.43
PTPRN-202ENST00000409251 ABHD18Q0P651 414 aa12.39□□□□□ -0.43
PTPRN-202ENST00000409251 P2RY14Q15391 338 aa12.39□□□□□ -0.43
PTPRN-202ENST00000409251 YIF1BQ5BJH7 314 aa12.39□□□□□ -0.43
PTPRN-202ENST00000409251 C9orf50Q5SZB4 431 aa12.39□□□□□ -0.43
PTPRN-202ENST00000409251 ASTLQ6HA08 431 aaPredicted RBP12.39□□□□□ -0.43
PTPRN-202ENST00000409251 TMC8Q8IU68 726 aa12.39□□□□□ -0.43
PTPRN-202ENST00000409251 TCEAL8Q8IYN2 117 aa12.39□□□□□ -0.43
PTPRN-202ENST00000409251 C2orf15Q8WU43 125 aaKnown RBP12.39□□□□□ -0.43
PTPRN-202ENST00000409251 MCCC1Q96RQ3 725 aaPredicted RBP12.39□□□□□ -0.43
PTPRN-202ENST00000409251 NDRG2Q9UN36 371 aaKnown RBP12.39□□□□□ -0.43
PTPRN-202ENST00000409251 MED16Q9Y2X0 877 aa12.39□□□□□ -0.43
PTPRN-202ENST00000409251 PTPRDP23468 1912 aa12.39□□□□□ -0.43
PTPRN-202ENST00000409251 ENTPD6O75354 484 aa12.39□□□□□ -0.43
PTPRN-202ENST00000409251 PDGFAP04085 211 aa12.39□□□□□ -0.43
PTPRN-202ENST00000409251 RETP07949 1114 aa12.39□□□□□ -0.43
PTPRN-202ENST00000409251 CTSAP10619 480 aa12.39□□□□□ -0.43
PTPRN-202ENST00000409251 JUNDP17535 347 aa12.39□□□□□ -0.43
PTPRN-202ENST00000409251 PBLDP30039 288 aaPredicted RBP12.39□□□□□ -0.43
PTPRN-202ENST00000409251 PBX2P40425 430 aa12.39□□□□□ -0.43
PTPRN-202ENST00000409251 RPS26P62854 115 aaKnown RBP12.39□□□□□ -0.43
PTPRN-202ENST00000409251 ERICH5Q6P6B1 374 aa12.39□□□□□ -0.43
PTPRN-202ENST00000409251 CASP12Q6UXS9 341 aa12.39□□□□□ -0.43
PTPRN-202ENST00000409251 MGME1Q9BQP7 344 aa12.39□□□□□ -0.43
PTPRN-202ENST00000409251 C2orf49Q9BVC5 232 aaPredicted RBP12.39□□□□□ -0.43
PTPRN-202ENST00000409251 RACGAP1Q9H0H5 632 aa12.39□□□□□ -0.43
PTPRN-202ENST00000409251 CLEC4MQ9H2X3 399 aaPredicted RBP12.39□□□□□ -0.43
PTPRN-202ENST00000409251 CCDC59Q9P031 241 aaKnown RBP12.39□□□□□ -0.43
PTPRN-202ENST00000409251 MRPS23Q9Y3D9 190 aaKnown RBP12.39□□□□□ -0.43
PTPRN-202ENST00000409251 TRANK1O15050 2925 aa12.39□□□□□ -0.43
PTPRN-202ENST00000409251 MGAT4DA6NG13 374 aa12.38□□□□□ -0.43
PTPRN-202ENST00000409251 MANBAO00462 879 aa12.38□□□□□ -0.43
PTPRN-202ENST00000409251 PCDH7O60245 1069 aa12.38□□□□□ -0.43
PTPRN-202ENST00000409251 STK16O75716 305 aa12.38□□□□□ -0.43
PTPRN-202ENST00000409251 TRBC1P01850 177 aa12.38□□□□□ -0.43
PTPRN-202ENST00000409251 PROS1P07225 676 aa12.38□□□□□ -0.43
PTPRN-202ENST00000409251 LAMP1P11279 417 aa12.38□□□□□ -0.43
PTPRN-202ENST00000409251 CHI3L1P36222 383 aaPredicted RBP12.38□□□□□ -0.43
PTPRN-202ENST00000409251 TTPAP49638 278 aa12.38□□□□□ -0.43
PTPRN-202ENST00000409251 SPHARQ15513 63 aa12.38□□□□□ -0.43
PTPRN-202ENST00000409251 TBCEQ15813 527 aaPredicted RBP12.38□□□□□ -0.43
PTPRN-202ENST00000409251 ATAT1Q5SQI0 421 aa12.38□□□□□ -0.43
PTPRN-202ENST00000409251 RETSATQ6NUM9 610 aa12.38□□□□□ -0.43
PTPRN-202ENST00000409251 ADAMTSL2Q86TH1 951 aa12.38□□□□□ -0.43
PTPRN-202ENST00000409251 TEX26Q8N6G2 289 aa12.38□□□□□ -0.43
PTPRN-202ENST00000409251 LSM14AQ8ND56 463 aaKnown RBP12.38□□□□□ -0.43
PTPRN-202ENST00000409251 GATAD2BQ8WXI9 593 aa12.38□□□□□ -0.43
PTPRN-202ENST00000409251 MYO19Q96H55 970 aa12.38□□□□□ -0.43
PTPRN-202ENST00000409251 ACPTQ9BZG2 426 aa12.38□□□□□ -0.43
PTPRN-202ENST00000409251 SPRTNQ9H040 489 aaPredicted RBP12.38□□□□□ -0.43
PTPRN-202ENST00000409251 MED28Q9H204 178 aa12.38□□□□□ -0.43
PTPRN-202ENST00000409251 HEBP1Q9NRV9 189 aa12.38□□□□□ -0.43
PTPRN-202ENST00000409251 SLC22A14Q9Y267 594 aa12.38□□□□□ -0.43
PTPRN-202ENST00000409251 INSL6Q9Y581 213 aa12.38□□□□□ -0.43
PTPRN-202ENST00000409251 MROH6A6NGR9 719 aa12.38□□□□□ -0.43
PTPRN-202ENST00000409251 CHURC1-FNTBB4DL54 471 aa12.38□□□□□ -0.43
PTPRN-202ENST00000409251 B8ZZF3 427 aa12.38□□□□□ -0.43
PTPRN-202ENST00000409251 INMT-MINDY4F8WBC2 141 aa12.38□□□□□ -0.43
PTPRN-202ENST00000409251 TLX2O43763 284 aaPredicted RBP12.38□□□□□ -0.43
PTPRN-202ENST00000409251 CH25HO95992 272 aa12.38□□□□□ -0.43
PTPRN-202ENST00000409251 PLATP00750 562 aa12.38□□□□□ -0.43
PTPRN-202ENST00000409251 PRKAR1AP10644 381 aa12.38□□□□□ -0.43
PTPRN-202ENST00000409251 DCDC1P59894 354 aa12.38□□□□□ -0.43
PTPRN-202ENST00000409251 ACSM2AQ08AH3 577 aa12.38□□□□□ -0.43
PTPRN-202ENST00000409251 MAD2L1Q13257 205 aaPredicted RBP12.38□□□□□ -0.43
PTPRN-202ENST00000409251 INSL4Q14641 139 aa12.38□□□□□ -0.43
PTPRN-202ENST00000409251 PTGES3Q15185 160 aaKnown RBP12.38□□□□□ -0.43
PTPRN-202ENST00000409251 ZNF79Q15937 498 aa12.38□□□□□ -0.43
PTPRN-202ENST00000409251 ACSM2BQ68CK6 577 aa12.38□□□□□ -0.43
PTPRN-202ENST00000409251 PDZD3Q86UT5 571 aa12.38□□□□□ -0.43
PTPRN-202ENST00000409251 NAGSQ8N159 534 aa12.38□□□□□ -0.43
PTPRN-202ENST00000409251 LSMEM1Q8N8F7 131 aa12.38□□□□□ -0.43
PTPRN-202ENST00000409251 ZBP1Q9H171 429 aa12.38□□□□□ -0.43
PTPRN-202ENST00000409251 MRM3Q9HC36 420 aaKnown RBP12.38□□□□□ -0.43
PTPRN-202ENST00000409251 ELOVL2Q9NXB9 296 aa12.38□□□□□ -0.43
PTPRN-202ENST00000409251 GPR52Q9Y2T5 361 aa12.38□□□□□ -0.43
PTPRN-202ENST00000409251 GRIP1Q9Y3R0 1128 aa12.38□□□□□ -0.43
PTPRN-202ENST00000409251 PCDHGB3Q9Y5G1 929 aa12.38□□□□□ -0.43
PTPRN-202ENST00000409251 CKAP5Q14008 2032 aa12.38□□□□□ -0.43
PTPRN-202ENST00000409251 C2orf92A0A1B0GVN3 265 aa12.38□□□□□ -0.43
PTPRN-202ENST00000409251 ARNTLO00327 626 aa12.38□□□□□ -0.43
PTPRN-202ENST00000409251 HPGDSO60760 199 aa12.38□□□□□ -0.43
PTPRN-202ENST00000409251 CSF3P09919 207 aa12.38□□□□□ -0.43
PTPRN-202ENST00000409251 SRCP12931 536 aa12.38□□□□□ -0.43
PTPRN-202ENST00000409251 TYRP14679 529 aa12.38□□□□□ -0.43
PTPRN-202ENST00000409251 HNF1BP35680 557 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms