RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 RASAL1O95294 804 aa10.84□□□□□ -0.67
SMARCAL1-203ENST00000392128 TYRP1P17643 537 aa10.84□□□□□ -0.67
SMARCAL1-203ENST00000392128 NTSP30990 170 aa10.84□□□□□ -0.67
SMARCAL1-203ENST00000392128 MAGEA2P43356 314 aa10.84□□□□□ -0.67
SMARCAL1-203ENST00000392128 CAPZBP47756 277 aa10.84□□□□□ -0.67
SMARCAL1-203ENST00000392128 ZXDAP98168 799 aa10.84□□□□□ -0.67
SMARCAL1-203ENST00000392128 HSPB3Q12988 150 aa10.84□□□□□ -0.67
SMARCAL1-203ENST00000392128 SLC48A1Q6P1K1 146 aa10.84□□□□□ -0.67
SMARCAL1-203ENST00000392128 ABHD13Q7L211 337 aa10.84□□□□□ -0.67
SMARCAL1-203ENST00000392128 EIF3MQ7L2H7 374 aaKnown RBP10.84□□□□□ -0.67
SMARCAL1-203ENST00000392128 ZNF438Q7Z4V0 828 aa10.84□□□□□ -0.67
SMARCAL1-203ENST00000392128 OR4N4Q8N0Y3 316 aa10.84□□□□□ -0.67
SMARCAL1-203ENST00000392128 CBR4Q8N4T8 237 aa10.84□□□□□ -0.67
SMARCAL1-203ENST00000392128 ZFP28Q8NHY6 868 aa10.84□□□□□ -0.67
SMARCAL1-203ENST00000392128 MAL2Q969L2 176 aa10.84□□□□□ -0.67
SMARCAL1-203ENST00000392128 AMDHD1Q96NU7 426 aa10.84□□□□□ -0.67
SMARCAL1-203ENST00000392128 ASPSCR1Q9BZE9 553 aa10.84□□□□□ -0.67
SMARCAL1-203ENST00000392128 GLIPR2Q9H4G4 154 aa10.84□□□□□ -0.67
SMARCAL1-203ENST00000392128 NTN4Q9HB63 628 aa10.84□□□□□ -0.67
SMARCAL1-203ENST00000392128 DNAJB9Q9UBS3 223 aa10.84□□□□□ -0.67
SMARCAL1-203ENST00000392128 MAP4K5Q9Y4K4 846 aa10.84□□□□□ -0.67
SMARCAL1-203ENST00000392128 AP4B1Q9Y6B7 739 aa10.84□□□□□ -0.67
SMARCAL1-203ENST00000392128 SCN3AQ9NY46 2000 aa10.83□□□□□ -0.68
SMARCAL1-203ENST00000392128 C7orf72A4D263 438 aa10.83□□□□□ -0.68
SMARCAL1-203ENST00000392128 MYO1GB0I1T2 1018 aa10.83□□□□□ -0.68
SMARCAL1-203ENST00000392128 UPK1AO00322 258 aa10.83□□□□□ -0.68
SMARCAL1-203ENST00000392128 PRAMEF10O60809 474 aa10.83□□□□□ -0.68
SMARCAL1-203ENST00000392128 PRKRAO75569 313 aaKnown RBP10.83□□□□□ -0.68
SMARCAL1-203ENST00000392128 PIAS2O75928 621 aa10.83□□□□□ -0.68
SMARCAL1-203ENST00000392128 SEMG1P04279 462 aa10.83□□□□□ -0.68
SMARCAL1-203ENST00000392128 ZNF10P21506 573 aaPredicted RBP10.83□□□□□ -0.68
SMARCAL1-203ENST00000392128 EEF1A2Q05639 463 aaKnown RBP10.83□□□□□ -0.68
SMARCAL1-203ENST00000392128 CEBPEQ15744 281 aa10.83□□□□□ -0.68
SMARCAL1-203ENST00000392128 ZNF630Q2M218 657 aaPredicted RBP10.83□□□□□ -0.68
SMARCAL1-203ENST00000392128 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.83□□□□□ -0.68
SMARCAL1-203ENST00000392128 C18orf63Q68DL7 685 aa10.83□□□□□ -0.68
SMARCAL1-203ENST00000392128 MARVELD2Q8N4S9 558 aa10.83□□□□□ -0.68
SMARCAL1-203ENST00000392128 GATA6Q92908 595 aa10.83□□□□□ -0.68
SMARCAL1-203ENST00000392128 VPS50Q96JG6 964 aa10.83□□□□□ -0.68
SMARCAL1-203ENST00000392128 MAPKAP1Q9BPZ7 522 aa10.83□□□□□ -0.68
SMARCAL1-203ENST00000392128 OSBPL11Q9BXB4 747 aa10.83□□□□□ -0.68
SMARCAL1-203ENST00000392128 ERVMER34-1Q9H9K5 563 aa10.83□□□□□ -0.68
SMARCAL1-203ENST00000392128 PRDM9Q9NQV7 894 aa10.83□□□□□ -0.68
SMARCAL1-203ENST00000392128 PHF11Q9UIL8 331 aa10.83□□□□□ -0.68
SMARCAL1-203ENST00000392128 SNX11Q9Y5W9 270 aa10.83□□□□□ -0.68
SMARCAL1-203ENST00000392128 AK5Q9Y6K8 562 aa10.83□□□□□ -0.68
SMARCAL1-203ENST00000392128 SPEGQ15772 3267 aa10.83□□□□□ -0.68
SMARCAL1-203ENST00000392128 TXNDC9O14530 226 aa10.83□□□□□ -0.68
SMARCAL1-203ENST00000392128 PGRMC2O15173 223 aa10.83□□□□□ -0.68
SMARCAL1-203ENST00000392128 SH3BP5O60239 455 aa10.83□□□□□ -0.68
SMARCAL1-203ENST00000392128 ZNF682O95780 498 aa10.83□□□□□ -0.68
SMARCAL1-203ENST00000392128 ST6GAL1P15907 406 aa10.83□□□□□ -0.68
SMARCAL1-203ENST00000392128 PRIM2P49643 509 aa10.83□□□□□ -0.68
SMARCAL1-203ENST00000392128 CDK9P50750 372 aaKnown RBP10.83□□□□□ -0.68
SMARCAL1-203ENST00000392128 ELOAQ14241 798 aaKnown RBP10.83□□□□□ -0.68
SMARCAL1-203ENST00000392128 DEFB133Q30KQ1 61 aa10.83□□□□□ -0.68
SMARCAL1-203ENST00000392128 TMEM214Q6NUQ4 689 aaKnown RBP10.83□□□□□ -0.68
SMARCAL1-203ENST00000392128 DGLUCYQ7Z3D6 616 aa10.83□□□□□ -0.68
SMARCAL1-203ENST00000392128 SLC30A8Q8IWU4 369 aa10.83□□□□□ -0.68
SMARCAL1-203ENST00000392128 C19orf47Q8N9M1 422 aaKnown RBP10.83□□□□□ -0.68
SMARCAL1-203ENST00000392128 ZCCHC10Q8TBK6 192 aa10.83□□□□□ -0.68
SMARCAL1-203ENST00000392128 KLHL6Q8WZ60 621 aa10.83□□□□□ -0.68
SMARCAL1-203ENST00000392128 TRAPPC9Q96Q05 1148 aa10.83□□□□□ -0.68
SMARCAL1-203ENST00000392128 BBS4Q96RK4 519 aa10.83□□□□□ -0.68
SMARCAL1-203ENST00000392128 SLC38A3Q99624 504 aa10.83□□□□□ -0.68
SMARCAL1-203ENST00000392128 TMEM121BQ9BXQ6 578 aaPredicted RBP10.83□□□□□ -0.68
SMARCAL1-203ENST00000392128 TNRC6BQ9UPQ9 1833 aaKnown RBP10.83□□□□□ -0.68
SMARCAL1-203ENST00000392128 MUC3AQ02505 3323 aa10.82□□□□□ -0.68
SMARCAL1-203ENST00000392128 CACNA1IQ9P0X4 2223 aa10.82□□□□□ -0.68
SMARCAL1-203ENST00000392128 GLOD5A6NK44 160 aa10.82□□□□□ -0.68
SMARCAL1-203ENST00000392128 PDLIM1O00151 329 aa10.82□□□□□ -0.68
SMARCAL1-203ENST00000392128 B3GALT2O43825 422 aa10.82□□□□□ -0.68
SMARCAL1-203ENST00000392128 CST1P01037 141 aa10.82□□□□□ -0.68
SMARCAL1-203ENST00000392128 PROS1P07225 676 aa10.82□□□□□ -0.68
SMARCAL1-203ENST00000392128 ARAFP10398 606 aa10.82□□□□□ -0.68
SMARCAL1-203ENST00000392128 NR2F6P10588 404 aa10.82□□□□□ -0.68
SMARCAL1-203ENST00000392128 ALOX12P18054 663 aa10.82□□□□□ -0.68
SMARCAL1-203ENST00000392128 CDH3P22223 829 aa10.82□□□□□ -0.68
SMARCAL1-203ENST00000392128 BUD31P41223 144 aaPredicted RBP10.82□□□□□ -0.68
SMARCAL1-203ENST00000392128 CCT3P49368 545 aaKnown RBP10.82□□□□□ -0.68
SMARCAL1-203ENST00000392128 NCBP2P52298 156 aaKnown RBP eCLIP10.82□□□□□ -0.68
SMARCAL1-203ENST00000392128 CRYBA2P53672 197 aa10.82□□□□□ -0.68
SMARCAL1-203ENST00000392128 CASP9P55211 416 aa10.82□□□□□ -0.68
SMARCAL1-203ENST00000392128 DSTNP60981 165 aa10.82□□□□□ -0.68
SMARCAL1-203ENST00000392128 SNRPNP63162 240 aaKnown RBP10.82□□□□□ -0.68
SMARCAL1-203ENST00000392128 TNFRSF17Q02223 184 aa10.82□□□□□ -0.68
SMARCAL1-203ENST00000392128 SCARB2Q14108 478 aa10.82□□□□□ -0.68
SMARCAL1-203ENST00000392128 DEFB134Q4QY38 66 aa10.82□□□□□ -0.68
SMARCAL1-203ENST00000392128 C14orf28Q4W4Y0 310 aa10.82□□□□□ -0.68
SMARCAL1-203ENST00000392128 TMEM64Q6YI46 380 aa10.82□□□□□ -0.68
SMARCAL1-203ENST00000392128 CCDC80Q76M96 950 aa10.82□□□□□ -0.68
SMARCAL1-203ENST00000392128 CNRIP1Q96F85 164 aaPredicted RBP10.82□□□□□ -0.68
SMARCAL1-203ENST00000392128 CD320Q9NPF0 282 aa10.82□□□□□ -0.68
SMARCAL1-203ENST00000392128 IL1RAPQ9NPH3 570 aa10.82□□□□□ -0.68
SMARCAL1-203ENST00000392128 PRMT8Q9NR22 394 aaPredicted RBP10.82□□□□□ -0.68
SMARCAL1-203ENST00000392128 KCMF1Q9P0J7 381 aa10.82□□□□□ -0.68
SMARCAL1-203ENST00000392128 PADI4Q9UM07 663 aa10.82□□□□□ -0.68
SMARCAL1-203ENST00000392128 ENTPD4Q9Y227 616 aa10.82□□□□□ -0.68
SMARCAL1-203ENST00000392128 WASHC1A8K0Z3 465 aa10.82□□□□□ -0.68
SMARCAL1-203ENST00000392128 SDC3O75056 442 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms