RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 MILR1Q7Z6M3 343 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 PDZD3Q86UT5 571 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 CIR1Q86X95 450 aaPredicted RBP3.29□□□□□ -1.88
TRAV39-201ENST00000390466 BBS7Q8IWZ6 715 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 FAM217AQ8IXS0 508 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 KLHDC8AQ8IYD2 350 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 LRRC56Q8IYG6 542 aaPredicted RBP3.29□□□□□ -1.88
TRAV39-201ENST00000390466 LINC00518Q8N0U6 118 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 STX19Q8N4C7 294 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 CAMKK1Q8N5S9 505 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 ZNF655Q8N720 491 aaPredicted RBP3.29□□□□□ -1.88
TRAV39-201ENST00000390466 UXS1Q8NBZ7 420 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 ZBTB44Q8NCP5 570 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 TTLQ8NG68 377 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 OR7G3Q8NG95 312 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 GPR32P1Q8NGA4 272 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 OR52I1Q8NGK6 324 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 OR52P1PQ8NH57 321 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 HUS1BQ8NHY5 278 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 ENKURQ8TC29 256 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 UBASH3BQ8TF42 649 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 KLHL6Q8WZ60 621 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 ST8SIA4Q92187 359 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 FOXJ1Q92949 421 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 RNF34Q969K3 372 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 CREB3L1Q96BA8 519 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 OMA1Q96E52 524 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 FUBP3Q96I24 572 aaKnown RBP eCLIP3.29□□□□□ -1.88
TRAV39-201ENST00000390466 EXOC2Q96KP1 924 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 LINC00052Q96N35 136 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 TSSK3Q96PN8 268 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 DMRTA2Q96SC8 542 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 FAM129BQ96TA1 746 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 C19orf43Q9BQ61 176 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 DOHHQ9BU89 302 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 ZSCAN5AQ9BUG6 496 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 HTATIP2Q9BUP3 242 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 CNPPD1Q9BV87 410 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 ACAT2Q9BWD1 397 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 BBS2Q9BXC9 721 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 MRPL9Q9BYD2 267 aaKnown RBP3.29□□□□□ -1.88
TRAV39-201ENST00000390466 ZYG11BQ9C0D3 744 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 POLR1EQ9GZS1 481 aaKnown RBP3.29□□□□□ -1.88
TRAV39-201ENST00000390466 PPIL3Q9H2H8 161 aaKnown RBP3.29□□□□□ -1.88
TRAV39-201ENST00000390466 TMEM38AQ9H6F2 299 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 NT5DC2Q9H857 520 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 ANKRA2Q9H9E1 313 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 NMNAT1Q9HAN9 279 aaPredicted RBP3.29□□□□□ -1.88
TRAV39-201ENST00000390466 SLC28A3Q9HAS3 691 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 TPT1P8Q9HAU6 139 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 FGF20Q9NP95 211 aaPredicted RBP3.29□□□□□ -1.88
TRAV39-201ENST00000390466 ISYNA1Q9NPH2 558 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 C12orf4Q9NQ89 552 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 LATS2Q9NRM7 1088 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 GKN1Q9NS71 199 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 ABCC13Q9NSE7 274 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 SPATA6Q9NWH7 488 aaPredicted RBP3.29□□□□□ -1.88
TRAV39-201ENST00000390466 LYARQ9NX58 379 aaKnown RBP3.29□□□□□ -1.88
TRAV39-201ENST00000390466 IL20Q9NYY1 176 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 COQ3Q9NZJ6 369 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 DNAJC27Q9NZQ0 273 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 TRPM5Q9NZQ8 1165 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 IL17CQ9P0M4 197 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 KIF17Q9P2E2 1029 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 NLKQ9UBE8 527 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 RABL2AQ9UBK7 228 aaPredicted RBP3.29□□□□□ -1.88
TRAV39-201ENST00000390466 LHX3Q9UBR4 397 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 AFF4Q9UHB7 1163 aaKnown RBP3.29□□□□□ -1.88
TRAV39-201ENST00000390466 CPA4Q9UI42 421 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 BTNL2Q9UIR0 455 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 TMCC3Q9ULS5 477 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 DUSP12Q9UNI6 340 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 MAPRE3Q9UPY8 281 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 ASB4Q9Y574 426 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 PCDHB11Q9Y5F2 797 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 TIMM13Q9Y5L4 95 aaPredicted RBP3.29□□□□□ -1.88
TRAV39-201ENST00000390466 SNX11Q9Y5W9 270 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 CLCA3PQ9Y6N3 262 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 ENPP4Q9Y6X5 453 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 GOLGA4Q13439 2230 aaKnown RBP3.29□□□□□ -1.88
TRAV39-201ENST00000390466 HEATR5AQ86XA9 2040 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 FANCMQ8IYD8 2048 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 TRPM6Q9BX84 2022 aa3.29□□□□□ -1.88
TRAV39-201ENST00000390466 MEIKINA0A087WXM9 373 aa3.28□□□□□ -1.88
TRAV39-201ENST00000390466 A0A0A6YYJ9 748 aa3.28□□□□□ -1.88
TRAV39-201ENST00000390466 TRBV4-1A0A0J9YWV2 114 aa3.28□□□□□ -1.88
TRAV39-201ENST00000390466 LINC00854A0A1B0GVQ3 168 aa3.28□□□□□ -1.88
TRAV39-201ENST00000390466 hCG_1807616A0A1W2PRN6 198 aa3.28□□□□□ -1.88
TRAV39-201ENST00000390466 TMEM129A0AVI4 362 aa3.28□□□□□ -1.88
TRAV39-201ENST00000390466 OR2M5A3KFT3 312 aa3.28□□□□□ -1.88
TRAV39-201ENST00000390466 FABP12A6NFH5 140 aa3.28□□□□□ -1.88
TRAV39-201ENST00000390466 GLTPD2A6NH11 291 aa3.28□□□□□ -1.88
TRAV39-201ENST00000390466 GABRR3A8MPY1 467 aa3.28□□□□□ -1.88
TRAV39-201ENST00000390466 A8MXK9 166 aa3.28□□□□□ -1.88
TRAV39-201ENST00000390466 MAGEB17A8MXT2 336 aa3.28□□□□□ -1.88
TRAV39-201ENST00000390466 INMT-MINDY4F8WBC2 141 aa3.28□□□□□ -1.88
TRAV39-201ENST00000390466 H3BRB1 525 aa3.28□□□□□ -1.88
TRAV39-201ENST00000390466 DNASE2O00115 360 aaPredicted RBP3.28□□□□□ -1.88
TRAV39-201ENST00000390466 TLR4O00206 839 aa3.28□□□□□ -1.88
TRAV39-201ENST00000390466 CBX4O00257 560 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms