RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 FIG4Q92562 907 aa24.87■■□□□ 1.57
ATPAF1-202ENST00000371937 CCDC74AQ96AQ1 378 aa24.87■■□□□ 1.57
ATPAF1-202ENST00000371937 RPF2Q9H7B2 306 aaKnown RBP24.87■■□□□ 1.57
ATPAF1-202ENST00000371937 STARD5Q9NSY2 213 aa24.87■■□□□ 1.57
ATPAF1-202ENST00000371937 KLHL3Q9UH77 587 aa24.87■■□□□ 1.57
ATPAF1-202ENST00000371937 ENTPD4Q9Y227 616 aa24.87■■□□□ 1.57
ATPAF1-202ENST00000371937 MRPS2Q9Y399 296 aaKnown RBP24.87■■□□□ 1.57
ATPAF1-202ENST00000371937 CXCR6O00574 342 aa24.86■■□□□ 1.57
ATPAF1-202ENST00000371937 SIGLEC6O43699 453 aa24.86■■□□□ 1.57
ATPAF1-202ENST00000371937 PRKRAO75569 313 aaKnown RBP24.86■■□□□ 1.57
ATPAF1-202ENST00000371937 SOAT1P35610 550 aa24.86■■□□□ 1.57
ATPAF1-202ENST00000371937 SNRPNP63162 240 aaKnown RBP24.86■■□□□ 1.57
ATPAF1-202ENST00000371937 SKP1P63208 163 aa24.86■■□□□ 1.57
ATPAF1-202ENST00000371937 RUNX2Q13950 521 aa24.86■■□□□ 1.57
ATPAF1-202ENST00000371937 NDUFA9Q16795 377 aa24.86■■□□□ 1.57
ATPAF1-202ENST00000371937 TCTE1Q5JU00 501 aa24.86■■□□□ 1.57
ATPAF1-202ENST00000371937 ZNF551Q7Z340 670 aaPredicted RBP24.86■■□□□ 1.57
ATPAF1-202ENST00000371937 SPRED1Q7Z699 444 aa24.86■■□□□ 1.57
ATPAF1-202ENST00000371937 OR52E4Q8NGH9 312 aa24.86■■□□□ 1.57
ATPAF1-202ENST00000371937 CANT1Q8WVQ1 401 aa24.86■■□□□ 1.57
ATPAF1-202ENST00000371937 ZNF285Q96NJ3 590 aa24.86■■□□□ 1.57
ATPAF1-202ENST00000371937 NPLQ9BXD5 320 aaPredicted RBP24.86■■□□□ 1.57
ATPAF1-202ENST00000371937 ANKHQ9HCJ1 492 aa24.86■■□□□ 1.57
ATPAF1-202ENST00000371937 CCM2LQ9NUG4 571 aaPredicted RBP24.86■■□□□ 1.57
ATPAF1-202ENST00000371937 NAALAD2Q9Y3Q0 740 aa24.86■■□□□ 1.57
ATPAF1-202ENST00000371937 SNX8Q9Y5X2 465 aa24.86■■□□□ 1.57
ATPAF1-202ENST00000371937 MN1Q10571 1320 aaPredicted RBP24.86■■□□□ 1.57
ATPAF1-202ENST00000371937 ERAL1O75616 437 aaKnown RBP24.86■■□□□ 1.57
ATPAF1-202ENST00000371937 KCNK5O95279 499 aa24.86■■□□□ 1.57
ATPAF1-202ENST00000371937 GABRA4P48169 554 aa24.86■■□□□ 1.57
ATPAF1-202ENST00000371937 VAC14Q08AM6 782 aa24.86■■□□□ 1.57
ATPAF1-202ENST00000371937 NIPAL1Q6NVV3 410 aa24.86■■□□□ 1.57
ATPAF1-202ENST00000371937 ANGPTL8Q6UXH0 198 aa24.86■■□□□ 1.57
ATPAF1-202ENST00000371937 RNF111Q6ZNA4 994 aa24.86■■□□□ 1.57
ATPAF1-202ENST00000371937 CLEC4FQ8N1N0 589 aa24.86■■□□□ 1.57
ATPAF1-202ENST00000371937 OR52N2Q8NGI0 321 aa24.86■■□□□ 1.57
ATPAF1-202ENST00000371937 PSMA8Q8TAA3 256 aa24.86■■□□□ 1.57
ATPAF1-202ENST00000371937 KLHL6Q8WZ60 621 aa24.86■■□□□ 1.57
ATPAF1-202ENST00000371937 N4BP2L2Q92802 583 aaPredicted RBP24.86■■□□□ 1.57
ATPAF1-202ENST00000371937 POP5Q969H6 163 aaKnown RBP24.86■■□□□ 1.57
ATPAF1-202ENST00000371937 AMDHD1Q96NU7 426 aa24.86■■□□□ 1.57
ATPAF1-202ENST00000371937 TRIM4Q9C037 500 aa24.86■■□□□ 1.57
ATPAF1-202ENST00000371937 CXorf36Q9H7Y0 433 aa24.86■■□□□ 1.57
ATPAF1-202ENST00000371937 TTC28Q96AY4 2481 aa24.85■■□□□ 1.57
ATPAF1-202ENST00000371937 TCRBV5S2A0A599 114 aa24.85■■□□□ 1.57
ATPAF1-202ENST00000371937 C1QCP02747 245 aa24.85■■□□□ 1.57
ATPAF1-202ENST00000371937 IL10P22301 178 aa24.85■■□□□ 1.57
ATPAF1-202ENST00000371937 ARL4DP49703 201 aa24.85■■□□□ 1.57
ATPAF1-202ENST00000371937 HSD11B2P80365 405 aa24.85■■□□□ 1.57
ATPAF1-202ENST00000371937 HSPB3Q12988 150 aa24.85■■□□□ 1.57
ATPAF1-202ENST00000371937 FADDQ13158 208 aa24.85■■□□□ 1.57
ATPAF1-202ENST00000371937 SPIDRQ14159 915 aa24.85■■□□□ 1.57
ATPAF1-202ENST00000371937 USP53Q70EK8 1073 aa24.85■■□□□ 1.57
ATPAF1-202ENST00000371937 SAMD14Q8IZD0 417 aaPredicted RBP24.85■■□□□ 1.57
ATPAF1-202ENST00000371937 ARHGEF39Q8N4T4 335 aa24.85■■□□□ 1.57
ATPAF1-202ENST00000371937 ARMC1Q9NVT9 282 aa24.85■■□□□ 1.57
ATPAF1-202ENST00000371937 SEMA5BQ9P283 1151 aa24.85■■□□□ 1.57
ATPAF1-202ENST00000371937 ZNF780BQ9Y6R6 833 aa24.85■■□□□ 1.57
ATPAF1-202ENST00000371937 MYO1GB0I1T2 1018 aa24.84■■□□□ 1.57
ATPAF1-202ENST00000371937 VHLP40337 213 aa24.84■■□□□ 1.57
ATPAF1-202ENST00000371937 CFHR1Q03591 330 aa24.84■■□□□ 1.57
ATPAF1-202ENST00000371937 VMACQ2NL98 169 aa24.84■■□□□ 1.57
ATPAF1-202ENST00000371937 DDX59Q5T1V6 619 aaKnown RBP eCLIP24.84■■□□□ 1.57
ATPAF1-202ENST00000371937 PDSS2Q86YH6 399 aa24.84■■□□□ 1.57
ATPAF1-202ENST00000371937 SLCO4A1Q96BD0 722 aa24.84■■□□□ 1.57
ATPAF1-202ENST00000371937 LOXL4Q96JB6 756 aa24.84■■□□□ 1.57
ATPAF1-202ENST00000371937 GLIPR2Q9H4G4 154 aa24.84■■□□□ 1.57
ATPAF1-202ENST00000371937 GMEB2Q9UKD1 530 aa24.84■■□□□ 1.57
ATPAF1-202ENST00000371937 SCN3AQ9NY46 2000 aa24.84■■□□□ 1.57
ATPAF1-202ENST00000371937 WASHC1A8K0Z3 465 aa24.84■■□□□ 1.57
ATPAF1-202ENST00000371937 CSNK2A2P19784 350 aaPredicted RBP24.84■■□□□ 1.57
ATPAF1-202ENST00000371937 MPIP34949 423 aa24.84■■□□□ 1.57
ATPAF1-202ENST00000371937 CRATP43155 626 aa24.84■■□□□ 1.57
ATPAF1-202ENST00000371937 NCBP2P52298 156 aaKnown RBP eCLIP24.84■■□□□ 1.57
ATPAF1-202ENST00000371937 LPAL2Q16609 132 aa24.84■■□□□ 1.57
ATPAF1-202ENST00000371937 GARNL3Q5VVW2 1013 aa24.84■■□□□ 1.57
ATPAF1-202ENST00000371937 OR52E8Q6IFG1 317 aa24.84■■□□□ 1.57
ATPAF1-202ENST00000371937 PRSS41Q7RTY9 318 aa24.84■■□□□ 1.57
ATPAF1-202ENST00000371937 ZZZ3Q8IYH5 903 aa24.84■■□□□ 1.57
ATPAF1-202ENST00000371937 OR5AK3PQ8NH89 298 aa24.84■■□□□ 1.57
ATPAF1-202ENST00000371937 NRG4Q8WWG1 115 aa24.84■■□□□ 1.57
ATPAF1-202ENST00000371937 NCLNQ969V3 563 aa24.84■■□□□ 1.57
ATPAF1-202ENST00000371937 FAM162AQ96A26 154 aa24.84■■□□□ 1.57
ATPAF1-202ENST00000371937 CNRIP1Q96F85 164 aaPredicted RBP24.84■■□□□ 1.57
ATPAF1-202ENST00000371937 CHST8Q9H2A9 424 aa24.84■■□□□ 1.57
ATPAF1-202ENST00000371937 ANAPC2Q9UJX6 822 aa24.84■■□□□ 1.57
ATPAF1-202ENST00000371937 AURKCQ9UQB9 309 aa24.84■■□□□ 1.57
ATPAF1-202ENST00000371937 RNF103-CHMP3A0A140T963 221 aa24.83■■□□□ 1.57
ATPAF1-202ENST00000371937 CPED1A4D0V7 1026 aa24.83■■□□□ 1.57
ATPAF1-202ENST00000371937 PCDHGA12O60330 932 aa24.83■■□□□ 1.57
ATPAF1-202ENST00000371937 CREG1O75629 220 aa24.83■■□□□ 1.57
ATPAF1-202ENST00000371937 RETP07949 1114 aa24.83■■□□□ 1.57
ATPAF1-202ENST00000371937 CSF2RBP32927 897 aa24.83■■□□□ 1.57
ATPAF1-202ENST00000371937 MVDP53602 400 aa24.83■■□□□ 1.57
ATPAF1-202ENST00000371937 SQSTM1Q13501 440 aa24.83■■□□□ 1.57
ATPAF1-202ENST00000371937 CEBPEQ15744 281 aa24.83■■□□□ 1.57
ATPAF1-202ENST00000371937 SPDYE7PQ495Y7 208 aa24.83■■□□□ 1.57
ATPAF1-202ENST00000371937 PRSS42Q7Z5A4 293 aa24.83■■□□□ 1.57
ATPAF1-202ENST00000371937 KMT5CQ86Y97 462 aa24.83■■□□□ 1.57
ATPAF1-202ENST00000371937 TMEM126BQ8IUX1 230 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms