RNA–Protein interactions for RNA: ENST00000369604.5

PHTF1-204, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PHTF1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-204ENST00000369604 PRMT3O60678 531 aa13.74□□□□□ -0.21
PHTF1-204ENST00000369604 IFNA14P01570 189 aa13.74□□□□□ -0.21
PHTF1-204ENST00000369604 NR2F6P10588 404 aa13.74□□□□□ -0.21
PHTF1-204ENST00000369604 CTBP2P56545 445 aa13.74□□□□□ -0.21
PHTF1-204ENST00000369604 CHRNA6Q15825 494 aa13.74□□□□□ -0.21
PHTF1-204ENST00000369604 ANXA8L1Q5VT79 327 aa13.74□□□□□ -0.21
PHTF1-204ENST00000369604 BICRALQ6AI39 1079 aa13.74□□□□□ -0.21
PHTF1-204ENST00000369604 ZNF730Q6ZMV8 503 aa13.74□□□□□ -0.21
PHTF1-204ENST00000369604 LRRC70Q7Z2Q7 622 aa13.74□□□□□ -0.21
PHTF1-204ENST00000369604 SLC28A3Q9HAS3 691 aa13.74□□□□□ -0.21
PHTF1-204ENST00000369604 RDH14Q9HBH5 336 aa13.74□□□□□ -0.21
PHTF1-204ENST00000369604 SLC25A19Q9HC21 320 aa13.74□□□□□ -0.21
PHTF1-204ENST00000369604 DNAJC11Q9NVH1 559 aa13.74□□□□□ -0.21
PHTF1-204ENST00000369604 SEC14L5O43304 696 aa13.74□□□□□ -0.21
PHTF1-204ENST00000369604 SH3BP5O60239 455 aa13.74□□□□□ -0.21
PHTF1-204ENST00000369604 LGI1O95970 557 aa13.74□□□□□ -0.21
PHTF1-204ENST00000369604 ETV3P41162 512 aa13.74□□□□□ -0.21
PHTF1-204ENST00000369604 RBBP4Q09028 425 aa13.74□□□□□ -0.21
PHTF1-204ENST00000369604 TUSC3Q13454 348 aa13.74□□□□□ -0.21
PHTF1-204ENST00000369604 BOP1Q14137 746 aaKnown RBP13.74□□□□□ -0.21
PHTF1-204ENST00000369604 GALEQ14376 348 aa13.74□□□□□ -0.21
PHTF1-204ENST00000369604 KLHL22Q53GT1 634 aa13.74□□□□□ -0.21
PHTF1-204ENST00000369604 ZNF628Q5EBL2 1059 aa13.74□□□□□ -0.21
PHTF1-204ENST00000369604 CD300LGQ6UXG3 332 aa13.74□□□□□ -0.21
PHTF1-204ENST00000369604 ANKS3Q6ZW76 656 aa13.74□□□□□ -0.21
PHTF1-204ENST00000369604 USP45Q70EL2 814 aa13.74□□□□□ -0.21
PHTF1-204ENST00000369604 WDR53Q7Z5U6 358 aaPredicted RBP13.74□□□□□ -0.21
PHTF1-204ENST00000369604 KCTD20Q7Z5Y7 419 aa13.74□□□□□ -0.21
PHTF1-204ENST00000369604 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.74□□□□□ -0.21
PHTF1-204ENST00000369604 MARVELD1Q9BSK0 173 aa13.74□□□□□ -0.21
PHTF1-204ENST00000369604 TMEM121BQ9BXQ6 578 aaPredicted RBP13.74□□□□□ -0.21
PHTF1-204ENST00000369604 KCTD5Q9NXV2 234 aa13.74□□□□□ -0.21
PHTF1-204ENST00000369604 ZNF282Q9UDV7 671 aaPredicted RBP13.74□□□□□ -0.21
PHTF1-204ENST00000369604 RWDD3Q9Y3V2 267 aa13.74□□□□□ -0.21
PHTF1-204ENST00000369604 PCDHGB7Q9Y5F8 929 aa13.74□□□□□ -0.21
PHTF1-204ENST00000369604 ENPP4Q9Y6X5 453 aa13.74□□□□□ -0.21
PHTF1-204ENST00000369604 WDR90Q96KV7 1748 aa13.73□□□□□ -0.21
PHTF1-204ENST00000369604 TRBV4-1A0A0J9YWV2 114 aa13.73□□□□□ -0.21
PHTF1-204ENST00000369604 LINC00862A6NCI5 91 aa13.73□□□□□ -0.21
PHTF1-204ENST00000369604 ZNF865P0CJ78 1059 aaPredicted RBP13.73□□□□□ -0.21
PHTF1-204ENST00000369604 SSTR2P30874 369 aa13.73□□□□□ -0.21
PHTF1-204ENST00000369604 XCR1P46094 333 aa13.73□□□□□ -0.21
PHTF1-204ENST00000369604 MRPS6P82932 125 aaKnown RBP13.73□□□□□ -0.21
PHTF1-204ENST00000369604 PURAQ00577 322 aaKnown RBP13.73□□□□□ -0.21
PHTF1-204ENST00000369604 CSTF1Q05048 431 aaKnown RBP13.73□□□□□ -0.21
PHTF1-204ENST00000369604 SF3A2Q15428 464 aaKnown RBP13.73□□□□□ -0.21
PHTF1-204ENST00000369604 ARMC12Q5T9G4 340 aa13.73□□□□□ -0.21
PHTF1-204ENST00000369604 FAM122CQ6P4D5 195 aa13.73□□□□□ -0.21
PHTF1-204ENST00000369604 LAS2Q8IYD9 372 aa13.73□□□□□ -0.21
PHTF1-204ENST00000369604 SLC16A10Q8TF71 515 aa13.73□□□□□ -0.21
PHTF1-204ENST00000369604 TM9SF4Q92544 642 aa13.73□□□□□ -0.21
PHTF1-204ENST00000369604 SUSD3Q96L08 255 aa13.73□□□□□ -0.21
PHTF1-204ENST00000369604 MRPL9Q9BYD2 267 aaKnown RBP13.73□□□□□ -0.21
PHTF1-204ENST00000369604 MCOLN1Q9GZU1 580 aa13.73□□□□□ -0.21
PHTF1-204ENST00000369604 POLR2J3Q9H1A7 115 aaKnown RBP13.73□□□□□ -0.21
PHTF1-204ENST00000369604 IL26Q9NPH9 171 aa13.73□□□□□ -0.21
PHTF1-204ENST00000369604 PRG3Q9Y2Y8 225 aaPredicted RBP13.73□□□□□ -0.21
PHTF1-204ENST00000369604 FCF1Q9Y324 198 aaKnown RBP13.73□□□□□ -0.21
PHTF1-204ENST00000369604 KCNE1BA0A087WTH5 132 aa13.73□□□□□ -0.21
PHTF1-204ENST00000369604 GLYATL1P3A0A0U1RQE8 302 aa13.73□□□□□ -0.21
PHTF1-204ENST00000369604 CLDN7O95471 211 aa13.73□□□□□ -0.21
PHTF1-204ENST00000369604 GBAP04062 536 aa13.73□□□□□ -0.21
PHTF1-204ENST00000369604 OSMP13725 252 aa13.73□□□□□ -0.21
PHTF1-204ENST00000369604 ETV5P41161 510 aa13.73□□□□□ -0.21
PHTF1-204ENST00000369604 STK19P49842 368 aaPredicted RBP13.73□□□□□ -0.21
PHTF1-204ENST00000369604 ETV1P50549 477 aa13.73□□□□□ -0.21
PHTF1-204ENST00000369604 SUZ12Q15022 739 aaKnown RBP13.73□□□□□ -0.21
PHTF1-204ENST00000369604 ZNF782Q6ZMW2 699 aaPredicted RBP13.73□□□□□ -0.21
PHTF1-204ENST00000369604 FAM193BQ96PV7 902 aaPredicted RBP13.73□□□□□ -0.21
PHTF1-204ENST00000369604 TMEM43Q9BTV4 400 aa13.73□□□□□ -0.21
PHTF1-204ENST00000369604 HTATIP2Q9BUP3 242 aa13.73□□□□□ -0.21
PHTF1-204ENST00000369604 TBC1D17Q9HA65 648 aa13.73□□□□□ -0.21
PHTF1-204ENST00000369604 PIKFYVEQ9Y2I7 2098 aa13.72□□□□□ -0.21
PHTF1-204ENST00000369604 ACSL4O60488 711 aa13.72□□□□□ -0.21
PHTF1-204ENST00000369604 PRAMEF4O60810 478 aa13.72□□□□□ -0.21
PHTF1-204ENST00000369604 C6orf47O95873 294 aa13.72□□□□□ -0.21
PHTF1-204ENST00000369604 PRKACAP17612 351 aa13.72□□□□□ -0.21
PHTF1-204ENST00000369604 ACRV1P26436 265 aa13.72□□□□□ -0.21
PHTF1-204ENST00000369604 AOAHP28039 575 aa13.72□□□□□ -0.21
PHTF1-204ENST00000369604 ZNF81P51508 661 aa13.72□□□□□ -0.21
PHTF1-204ENST00000369604 MGAT3Q09327 533 aa13.72□□□□□ -0.21
PHTF1-204ENST00000369604 PRAMEF9Q5VWM5 478 aa13.72□□□□□ -0.21
PHTF1-204ENST00000369604 METTL2BQ6P1Q9 378 aaKnown RBP13.72□□□□□ -0.21
PHTF1-204ENST00000369604 OR8J1Q8NGP2 316 aa13.72□□□□□ -0.21
PHTF1-204ENST00000369604 ARHGAP39Q9C0H5 1083 aa13.72□□□□□ -0.21
PHTF1-204ENST00000369604 CHST8Q9H2A9 424 aa13.72□□□□□ -0.21
PHTF1-204ENST00000369604 C1orf226A1L170 272 aa13.72□□□□□ -0.21
PHTF1-204ENST00000369604 C2orf78A6NCI8 922 aa13.72□□□□□ -0.21
PHTF1-204ENST00000369604 PSMA3P25788 255 aa13.72□□□□□ -0.21
PHTF1-204ENST00000369604 SLC11A2P49281 568 aa13.72□□□□□ -0.21
PHTF1-204ENST00000369604 CDH4P55283 916 aa13.72□□□□□ -0.21
PHTF1-204ENST00000369604 SRP54P61011 504 aaKnown RBP13.72□□□□□ -0.21
PHTF1-204ENST00000369604 SNTA1Q13424 505 aa13.72□□□□□ -0.21
PHTF1-204ENST00000369604 ZXDCQ2QGD7 858 aaPredicted RBP13.72□□□□□ -0.21
PHTF1-204ENST00000369604 TMEM65Q6PI78 240 aa13.72□□□□□ -0.21
PHTF1-204ENST00000369604 KRT74Q7RTS7 529 aa13.72□□□□□ -0.21
PHTF1-204ENST00000369604 GPR155Q7Z3F1 870 aa13.72□□□□□ -0.21
PHTF1-204ENST00000369604 ZC3HAV1LQ96H79 300 aaKnown RBP13.72□□□□□ -0.21
PHTF1-204ENST00000369604 SPNS1Q9H2V7 528 aa13.72□□□□□ -0.21
PHTF1-204ENST00000369604 THSD1Q9NS62 852 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms