RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 TMEM185BQ9H7F4 350 aa11.09□□□□□ -0.63
SYNE1-204ENST00000367248 MYO7AQ13402 2215 aa11.09□□□□□ -0.63
SYNE1-204ENST00000367248 RNF13O43567 381 aa11.09□□□□□ -0.63
SYNE1-204ENST00000367248 NUAK1O60285 661 aa11.09□□□□□ -0.63
SYNE1-204ENST00000367248 TRIM3O75382 744 aaPredicted RBP11.09□□□□□ -0.63
SYNE1-204ENST00000367248 SERPINA3P01011 423 aa11.09□□□□□ -0.63
SYNE1-204ENST00000367248 EGFP01133 1207 aa11.09□□□□□ -0.63
SYNE1-204ENST00000367248 CTSCP53634 463 aa11.09□□□□□ -0.63
SYNE1-204ENST00000367248 MOGSQ13724 837 aa11.09□□□□□ -0.63
SYNE1-204ENST00000367248 RGS21Q2M5E4 152 aa11.09□□□□□ -0.63
SYNE1-204ENST00000367248 LIN52Q52LA3 116 aa11.09□□□□□ -0.63
SYNE1-204ENST00000367248 ATG9BQ674R7 924 aa11.09□□□□□ -0.63
SYNE1-204ENST00000367248 OR8J3Q8NGG0 315 aa11.09□□□□□ -0.63
SYNE1-204ENST00000367248 OR5AR1Q8NGP9 310 aa11.09□□□□□ -0.63
SYNE1-204ENST00000367248 RTP3Q9BQQ7 232 aa11.09□□□□□ -0.63
SYNE1-204ENST00000367248 NKIRAS2Q9NYR9 191 aa11.09□□□□□ -0.63
SYNE1-204ENST00000367248 SOBPA7XYQ1 873 aa11.09□□□□□ -0.63
SYNE1-204ENST00000367248 NPIPA2E9PIF3 369 aa11.09□□□□□ -0.63
SYNE1-204ENST00000367248 NPIPA3F8WFD2 350 aa11.09□□□□□ -0.63
SYNE1-204ENST00000367248 RRP8O43159 456 aaKnown RBP11.09□□□□□ -0.63
SYNE1-204ENST00000367248 AIREO43918 545 aa11.09□□□□□ -0.63
SYNE1-204ENST00000367248 CDKL4Q5MAI5 379 aa11.09□□□□□ -0.63
SYNE1-204ENST00000367248 FAM160A2Q8N612 972 aaPredicted RBP11.09□□□□□ -0.63
SYNE1-204ENST00000367248 SLC22A8Q8TCC7 542 aa11.09□□□□□ -0.63
SYNE1-204ENST00000367248 ABCB9Q9NP78 766 aa11.09□□□□□ -0.63
SYNE1-204ENST00000367248 EFCAB7A8K855 629 aa11.09□□□□□ -0.63
SYNE1-204ENST00000367248 A8MVJ9 347 aa11.09□□□□□ -0.63
SYNE1-204ENST00000367248 TRMUO75648 421 aaKnown RBP11.09□□□□□ -0.63
SYNE1-204ENST00000367248 OR2B6P58173 313 aa11.09□□□□□ -0.63
SYNE1-204ENST00000367248 SCN1BQ07699 218 aa11.09□□□□□ -0.63
SYNE1-204ENST00000367248 KCTD21Q4G0X4 260 aa11.09□□□□□ -0.63
SYNE1-204ENST00000367248 CLIP4Q8N3C7 705 aa11.09□□□□□ -0.63
SYNE1-204ENST00000367248 CLCC1Q96S66 551 aa11.09□□□□□ -0.63
SYNE1-204ENST00000367248 ZFYVE21Q9BQ24 234 aa11.09□□□□□ -0.63
SYNE1-204ENST00000367248 EHD1Q9H4M9 534 aa11.09□□□□□ -0.63
SYNE1-204ENST00000367248 IGSF5Q9NSI5 407 aa11.09□□□□□ -0.63
SYNE1-204ENST00000367248 HPF1Q9NWY4 346 aa11.09□□□□□ -0.63
SYNE1-204ENST00000367248 AKIRIN2Q53H80 203 aa11.09□□□□□ -0.63
SYNE1-204ENST00000367248 SMIM14Q96QK8 99 aa11.09□□□□□ -0.63
SYNE1-204ENST00000367248 ALPK1Q96QP1 1244 aa11.09□□□□□ -0.63
SYNE1-204ENST00000367248 COMMD4Q9H0A8 199 aa11.09□□□□□ -0.63
SYNE1-204ENST00000367248 RPF2Q9H7B2 306 aaKnown RBP11.09□□□□□ -0.63
SYNE1-204ENST00000367248 KAT8Q9H7Z6 458 aaKnown RBP11.09□□□□□ -0.63
SYNE1-204ENST00000367248 PELI2Q9HAT8 420 aa11.09□□□□□ -0.63
SYNE1-204ENST00000367248 ANKMY1Q9P2S6 941 aa11.09□□□□□ -0.63
SYNE1-204ENST00000367248 LIPT1Q9Y234 373 aa11.09□□□□□ -0.63
SYNE1-204ENST00000367248 HS3ST2Q9Y278 367 aa11.09□□□□□ -0.63
SYNE1-204ENST00000367248 PDLIM1O00151 329 aa11.08□□□□□ -0.63
SYNE1-204ENST00000367248 DFNA5O60443 496 aa11.08□□□□□ -0.63
SYNE1-204ENST00000367248 DIRAS1O95057 198 aa11.08□□□□□ -0.63
SYNE1-204ENST00000367248 KLKB1P03952 638 aa11.08□□□□□ -0.63
SYNE1-204ENST00000367248 IFI30P13284 250 aa11.08□□□□□ -0.63
SYNE1-204ENST00000367248 BMP8BP34820 402 aa11.08□□□□□ -0.63
SYNE1-204ENST00000367248 TUBB3Q13509 450 aa11.08□□□□□ -0.63
SYNE1-204ENST00000367248 LIN54Q6MZP7 749 aa11.08□□□□□ -0.63
SYNE1-204ENST00000367248 BMP8AQ7Z5Y6 402 aa11.08□□□□□ -0.63
SYNE1-204ENST00000367248 LRRC25Q8N386 305 aaPredicted RBP11.08□□□□□ -0.63
SYNE1-204ENST00000367248 VN1R2Q8NFZ6 395 aa11.08□□□□□ -0.63
SYNE1-204ENST00000367248 L3HYPDHQ96EM0 354 aa11.08□□□□□ -0.63
SYNE1-204ENST00000367248 ZSWIM3Q96MP5 696 aa11.08□□□□□ -0.63
SYNE1-204ENST00000367248 ASPNQ9BXN1 380 aa11.08□□□□□ -0.63
SYNE1-204ENST00000367248 TREX1Q9NSU2 369 aa11.08□□□□□ -0.63
SYNE1-204ENST00000367248 ACOT7O00154 380 aa11.08□□□□□ -0.64
SYNE1-204ENST00000367248 IFNA6P05013 189 aa11.08□□□□□ -0.64
SYNE1-204ENST00000367248 MRPS21P82921 87 aaKnown RBP11.08□□□□□ -0.64
SYNE1-204ENST00000367248 GALNT1Q10472 559 aaPredicted RBP11.08□□□□□ -0.64
SYNE1-204ENST00000367248 RBM12BQ8IXT5 1001 aaKnown RBP11.08□□□□□ -0.64
SYNE1-204ENST00000367248 PRR22Q8IZ63 422 aa11.08□□□□□ -0.64
SYNE1-204ENST00000367248 HSPBAP1Q96EW2 488 aa11.08□□□□□ -0.64
SYNE1-204ENST00000367248 TSC22D4Q9Y3Q8 395 aa11.08□□□□□ -0.64
SYNE1-204ENST00000367248 PTGDR2Q9Y5Y4 395 aa11.08□□□□□ -0.64
SYNE1-204ENST00000367248 ETS2P15036 469 aa11.08□□□□□ -0.64
SYNE1-204ENST00000367248 PVRP15151 417 aa11.08□□□□□ -0.64
SYNE1-204ENST00000367248 ZNF20P17024 532 aa11.08□□□□□ -0.64
SYNE1-204ENST00000367248 SGCAQ16586 387 aa11.08□□□□□ -0.64
SYNE1-204ENST00000367248 C18orf21Q32NC0 220 aaPredicted RBP11.08□□□□□ -0.64
SYNE1-204ENST00000367248 CROCCP3Q8IVE0 287 aa11.08□□□□□ -0.64
SYNE1-204ENST00000367248 KLHDC8AQ8IYD2 350 aa11.08□□□□□ -0.64
SYNE1-204ENST00000367248 THEM6Q8WUY1 208 aa11.08□□□□□ -0.64
SYNE1-204ENST00000367248 LPAR4Q99677 370 aa11.08□□□□□ -0.64
SYNE1-204ENST00000367248 CTRCQ99895 268 aa11.08□□□□□ -0.64
SYNE1-204ENST00000367248 ULBP3Q9BZM4 244 aa11.08□□□□□ -0.64
SYNE1-204ENST00000367248 RHCGQ9UBD6 479 aa11.08□□□□□ -0.64
SYNE1-204ENST00000367248 LINC01565O15544 149 aa11.08□□□□□ -0.64
SYNE1-204ENST00000367248 HOXA9P31269 272 aa11.08□□□□□ -0.64
SYNE1-204ENST00000367248 ADARP55265 1226 aaKnown RBP11.08□□□□□ -0.64
SYNE1-204ENST00000367248 CLDN8P56748 225 aa11.08□□□□□ -0.64
SYNE1-204ENST00000367248 PDZD3Q86UT5 571 aa11.08□□□□□ -0.64
SYNE1-204ENST00000367248 ADAMTS18Q8TE60 1221 aa11.08□□□□□ -0.64
SYNE1-204ENST00000367248 KCMF1Q9P0J7 381 aa11.08□□□□□ -0.64
SYNE1-204ENST00000367248 IFT52Q9Y366 437 aa11.08□□□□□ -0.64
SYNE1-204ENST00000367248 DNMT3AQ9Y6K1 912 aaPredicted RBP11.08□□□□□ -0.64
SYNE1-204ENST00000367248 IL12RB1P42701 662 aa11.08□□□□□ -0.64
SYNE1-204ENST00000367248 TRAM2Q15035 370 aa11.08□□□□□ -0.64
SYNE1-204ENST00000367248 QPRTQ15274 297 aa11.08□□□□□ -0.64
SYNE1-204ENST00000367248 MANEAQ5SRI9 462 aa11.08□□□□□ -0.64
SYNE1-204ENST00000367248 LHX8Q68G74 356 aa11.08□□□□□ -0.64
SYNE1-204ENST00000367248 FIGNL1Q6PIW4 674 aa11.08□□□□□ -0.64
SYNE1-204ENST00000367248 RHBDF1Q96CC6 855 aa11.08□□□□□ -0.64
SYNE1-204ENST00000367248 TSSK6Q9BXA6 273 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms