RNA–Protein interactions for RNA: ENST00000364313.1

RNVU1-3-201, Transcript of RNA, variant U1 small nuclear 3, humanhuman

BASIC

Gene RNVU1-3, Length 161 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNVU1-3-201ENST00000364313 ACTR8Q9H981 624 aa3.54□□□□□ -1.84
RNVU1-3-201ENST00000364313 VPS37BQ9H9H4 285 aa3.54□□□□□ -1.84
RNVU1-3-201ENST00000364313 EBF2Q9HAK2 575 aa3.54□□□□□ -1.84
RNVU1-3-201ENST00000364313 A4GALTQ9NPC4 353 aa3.54□□□□□ -1.84
RNVU1-3-201ENST00000364313 HPS4Q9NQG7 708 aa3.54□□□□□ -1.84
RNVU1-3-201ENST00000364313 NMRK1Q9NWW6 199 aa3.54□□□□□ -1.84
RNVU1-3-201ENST00000364313 NDUFA13Q9P0J0 144 aa3.54□□□□□ -1.84
RNVU1-3-201ENST00000364313 COPS7AQ9UBW8 275 aa3.54□□□□□ -1.84
RNVU1-3-201ENST00000364313 PILRAQ9UKJ1 303 aa3.54□□□□□ -1.84
RNVU1-3-201ENST00000364313 SNX6Q9UNH7 406 aa3.54□□□□□ -1.84
RNVU1-3-201ENST00000364313 VDAC3Q9Y277 283 aa3.54□□□□□ -1.84
RNVU1-3-201ENST00000364313 KIF1AQ12756 1690 aa3.54□□□□□ -1.84
RNVU1-3-201ENST00000364313 NRXN1Q9ULB1 1477 aa3.54□□□□□ -1.84
RNVU1-3-201ENST00000364313 SPATA31E1Q6ZUB1 1445 aa3.53□□□□□ -1.84
RNVU1-3-201ENST00000364313 EIF3AQ14152 1382 aaKnown RBP3.53□□□□□ -1.84
RNVU1-3-201ENST00000364313 RAB3GAP2Q9H2M9 1393 aa3.53□□□□□ -1.84
RNVU1-3-201ENST00000364313 ZNF804BA4D1E1 1349 aa3.53□□□□□ -1.84
RNVU1-3-201ENST00000364313 ABCC4O15439 1325 aa3.53□□□□□ -1.84
RNVU1-3-201ENST00000364313 SF3B1O75533 1304 aaKnown RBP eCLIP3.53□□□□□ -1.84
RNVU1-3-201ENST00000364313 A0A0U1RQS6 177 aa3.53□□□□□ -1.84
RNVU1-3-201ENST00000364313 LOC101059948A0A1B0GTJ6 334 aa3.53□□□□□ -1.84
RNVU1-3-201ENST00000364313 RNF222A6NCQ9 220 aa3.53□□□□□ -1.84
RNVU1-3-201ENST00000364313 ANKRD30BLA7E2S9 258 aa3.53□□□□□ -1.84
RNVU1-3-201ENST00000364313 CCSO14618 274 aa3.53□□□□□ -1.84
RNVU1-3-201ENST00000364313 SDC3O75056 442 aa3.53□□□□□ -1.84
RNVU1-3-201ENST00000364313 NDUFA7O95182 113 aa3.53□□□□□ -1.84
RNVU1-3-201ENST00000364313 GSTA2P09210 222 aa3.53□□□□□ -1.84
RNVU1-3-201ENST00000364313 EPB41P11171 864 aaKnown RBP3.53□□□□□ -1.84
RNVU1-3-201ENST00000364313 GNSP15586 552 aa3.53□□□□□ -1.84
RNVU1-3-201ENST00000364313 EPHA2P29317 976 aa3.53□□□□□ -1.84
RNVU1-3-201ENST00000364313 AXLP30530 894 aa3.53□□□□□ -1.84
RNVU1-3-201ENST00000364313 PRDX2P32119 198 aa3.53□□□□□ -1.84
RNVU1-3-201ENST00000364313 KCNJ4P48050 445 aa3.53□□□□□ -1.84
RNVU1-3-201ENST00000364313 ACADVLP49748 655 aa3.53□□□□□ -1.84
RNVU1-3-201ENST00000364313 KCNK10P57789 538 aa3.53□□□□□ -1.84
RNVU1-3-201ENST00000364313 UBE2HP62256 183 aa3.53□□□□□ -1.84
RNVU1-3-201ENST00000364313 SP3Q02447 781 aa3.53□□□□□ -1.84
RNVU1-3-201ENST00000364313 GRB14Q14449 540 aa3.53□□□□□ -1.84
RNVU1-3-201ENST00000364313 TMEM132DQ14C87 1099 aa3.53□□□□□ -1.84
RNVU1-3-201ENST00000364313 KRT31Q15323 416 aa3.53□□□□□ -1.84
RNVU1-3-201ENST00000364313 SHROOM1Q2M3G4 852 aaPredicted RBP3.53□□□□□ -1.84
RNVU1-3-201ENST00000364313 DCAF4L1Q3SXM0 396 aa3.53□□□□□ -1.84
RNVU1-3-201ENST00000364313 POM121L1PQ3SYA9 428 aa3.53□□□□□ -1.84
RNVU1-3-201ENST00000364313 CCDC152Q4G0S7 254 aa3.53□□□□□ -1.84
RNVU1-3-201ENST00000364313 ZNF542PQ5EBM4 170 aa3.53□□□□□ -1.84
RNVU1-3-201ENST00000364313 SNRNP48Q6IEG0 339 aaKnown RBP3.53□□□□□ -1.84
RNVU1-3-201ENST00000364313 SULT1C3Q6IMI6 304 aa3.53□□□□□ -1.84
RNVU1-3-201ENST00000364313 NIPAL3Q6P499 406 aa3.53□□□□□ -1.84
RNVU1-3-201ENST00000364313 SLC39A4Q6P5W5 647 aa3.53□□□□□ -1.84
RNVU1-3-201ENST00000364313 FAM171BQ6P995 826 aa3.53□□□□□ -1.84
RNVU1-3-201ENST00000364313 RHBDF2Q6PJF5 856 aa3.53□□□□□ -1.84
RNVU1-3-201ENST00000364313 CEACAM20Q6UY09 585 aa3.53□□□□□ -1.84
RNVU1-3-201ENST00000364313 LRRC70Q7Z2Q7 622 aa3.53□□□□□ -1.84
RNVU1-3-201ENST00000364313 SLC22A16Q86VW1 577 aa3.53□□□□□ -1.84
RNVU1-3-201ENST00000364313 FAM89BQ8N5H3 189 aa3.53□□□□□ -1.84
RNVU1-3-201ENST00000364313 EIF1ADQ8N9N8 165 aaKnown RBP3.53□□□□□ -1.84
RNVU1-3-201ENST00000364313 KCNH5Q8NCM2 988 aa3.53□□□□□ -1.84
RNVU1-3-201ENST00000364313 OR6M1Q8NGM8 313 aa3.53□□□□□ -1.84
RNVU1-3-201ENST00000364313 RNF139Q8WU17 664 aa3.53□□□□□ -1.84
RNVU1-3-201ENST00000364313 SUSD6Q92537 303 aa3.53□□□□□ -1.84
RNVU1-3-201ENST00000364313 FCGR1BQ92637 280 aa3.53□□□□□ -1.84
RNVU1-3-201ENST00000364313 SCRN2Q96FV2 425 aa3.53□□□□□ -1.84
RNVU1-3-201ENST00000364313 PIWIL1Q96J94 861 aaKnown RBP3.53□□□□□ -1.84
RNVU1-3-201ENST00000364313 C4orf45Q96LM5 186 aa3.53□□□□□ -1.84
RNVU1-3-201ENST00000364313 LURAP1Q96LR2 239 aa3.53□□□□□ -1.84
RNVU1-3-201ENST00000364313 CCT7Q99832 543 aa3.53□□□□□ -1.84
RNVU1-3-201ENST00000364313 NCOR1P1Q9H4R4 102 aa3.53□□□□□ -1.84
RNVU1-3-201ENST00000364313 GAREM1Q9H706 876 aa3.53□□□□□ -1.84
RNVU1-3-201ENST00000364313 PELI2Q9HAT8 420 aa3.53□□□□□ -1.84
RNVU1-3-201ENST00000364313 ZBTB20Q9HC78 741 aaPredicted RBP3.53□□□□□ -1.84
RNVU1-3-201ENST00000364313 PALMDQ9NP74 551 aa3.53□□□□□ -1.84
RNVU1-3-201ENST00000364313 TRNAU1APQ9NX07 287 aaKnown RBP3.53□□□□□ -1.84
RNVU1-3-201ENST00000364313 GTSE1Q9NYZ3 720 aa3.53□□□□□ -1.84
RNVU1-3-201ENST00000364313 C6orf203Q9P0P8 240 aaPredicted RBP3.53□□□□□ -1.84
RNVU1-3-201ENST00000364313 PILRBQ9UKJ0 227 aa3.53□□□□□ -1.84
RNVU1-3-201ENST00000364313 ZNF490Q9ULM2 529 aaPredicted RBP3.53□□□□□ -1.84
RNVU1-3-201ENST00000364313 PCDHA7Q9UN72 937 aa3.53□□□□□ -1.84
RNVU1-3-201ENST00000364313 FOXJ3Q9UPW0 622 aa3.53□□□□□ -1.84
RNVU1-3-201ENST00000364313 CHMP2BQ9UQN3 213 aa3.53□□□□□ -1.84
RNVU1-3-201ENST00000364313 COL14A1Q05707 1796 aaKnown RBP3.53□□□□□ -1.84
RNVU1-3-201ENST00000364313 CKAP5Q14008 2032 aa3.53□□□□□ -1.84
RNVU1-3-201ENST00000364313 LAMC1P11047 1609 aa3.52□□□□□ -1.85
RNVU1-3-201ENST00000364313 ARID2Q68CP9 1835 aa3.52□□□□□ -1.85
RNVU1-3-201ENST00000364313 A0A0G2JPF8 293 aa3.52□□□□□ -1.85
RNVU1-3-201ENST00000364313 MBLAC1A4D2B0 266 aaPredicted RBP3.52□□□□□ -1.85
RNVU1-3-201ENST00000364313 MTMR11A4FU01 709 aa3.52□□□□□ -1.85
RNVU1-3-201ENST00000364313 LINC01553A4QN01 128 aa3.52□□□□□ -1.85
RNVU1-3-201ENST00000364313 ASPDHA6ND91 283 aa3.52□□□□□ -1.85
RNVU1-3-201ENST00000364313 SRRM3A6NNA2 597 aaPredicted RBP3.52□□□□□ -1.85
RNVU1-3-201ENST00000364313 SRRM4A7MD48 611 aaKnown RBP3.52□□□□□ -1.85
RNVU1-3-201ENST00000364313 HNRNPCL3B7ZW38 293 aa3.52□□□□□ -1.85
RNVU1-3-201ENST00000364313 OVOL3O00110 214 aa3.52□□□□□ -1.85
RNVU1-3-201ENST00000364313 CCL24O00175 119 aa3.52□□□□□ -1.85
RNVU1-3-201ENST00000364313 XPO1O14980 1071 aaKnown RBP3.52□□□□□ -1.85
RNVU1-3-201ENST00000364313 CTSVO60911 334 aa3.52□□□□□ -1.85
RNVU1-3-201ENST00000364313 GLRA3O75311 464 aa3.52□□□□□ -1.85
RNVU1-3-201ENST00000364313 IGHV4-39P01824 125 aa3.52□□□□□ -1.85
RNVU1-3-201ENST00000364313 CAPN1P07384 714 aa3.52□□□□□ -1.85
RNVU1-3-201ENST00000364313 HNRNPCL4P0DMR1 293 aa3.52□□□□□ -1.85
RNVU1-3-201ENST00000364313 CLUP10909 449 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms