RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 SPRP35270 261 aaPredicted RBP8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 AVPR1AP37288 418 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 CSRP3P50461 194 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 AGFG1P52594 562 aaKnown RBP8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 CSNK2BP67870 215 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 TOMM20Q15388 145 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 CAPN13Q6MZZ7 669 aaPredicted RBP8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 CENPLQ8N0S6 344 aaPredicted RBP8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 THEM5Q8N1Q8 247 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 APH1BQ8WW43 257 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 RNF157Q96PX1 679 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 DMRTA2Q96SC8 542 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 TREX2Q9BQ50 279 aaPredicted RBP8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 WNT5BQ9H1J7 359 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 RIBC2Q9H4K1 309 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 CERS4Q9HA82 394 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 AMBNQ9NP70 447 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 CCNB1IP1Q9NPC3 277 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 RBFOX1Q9NWB1 397 aaKnown RBP8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 GPN3Q9UHW5 284 aaPredicted RBP8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 GPR160Q9UJ42 338 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 LAMP5Q9UJQ1 280 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 NDRG2Q9UN36 371 aaKnown RBP8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 PTGDR2Q9Y5Y4 395 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 SESN1Q9Y6P5 492 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 SPEGQ15772 3267 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 USP34Q70CQ2 3546 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 KCNK1O00180 336 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 WRBO00258 174 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 TERTO14746 1132 aaKnown RBP8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 VPS26AO75436 327 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 CREG1O75629 220 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 IFNA4P05014 189 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 NMBP08949 121 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 HTR1EP28566 365 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 ACTR1BP42025 376 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 CHRNB3Q05901 458 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 SSPNQ14714 243 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 FAM74A1Q5RGS3 127 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 KDELC2Q7Z4H8 507 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 RNF130Q86XS8 419 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 OR1M1Q8NGA1 313 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 SMARCD1Q96GM5 515 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 WDFY2Q96P53 400 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 KCTD15Q96SI1 283 aaPredicted RBP8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 MYOCQ99972 504 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 SARGQ9BW04 601 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 MND1Q9BWT6 205 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 MARCH5Q9NX47 278 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 SPHK1Q9NYA1 384 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 HCN3Q9P1Z3 774 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 KNL1Q8NG31 2342 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 GON4LQ3T8J9 2241 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 H3BM21 787 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 PRMT3O60678 531 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 SLC43A1O75387 559 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 CCNB2O95067 398 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 PTHP01270 115 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 IL6P05231 212 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 GALTP07902 379 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 ADRB1P08588 477 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 FBP1P09467 338 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 PGAM1P18669 254 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 CXCL3P19876 107 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 RAB3BP20337 219 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 DAOAP59103 153 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 RNF4P78317 190 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 NFYCQ13952 458 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 ZNF460Q14592 562 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 FAM98BQ52LJ0 330 aaKnown RBP8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 PSTKQ8IV42 348 aaKnown RBP8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 CHPFQ8IZ52 775 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 MRPL43Q8N983 215 aaKnown RBP8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 ZNF675Q8TD23 568 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 BTN2A2Q8WVV5 523 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 LRRC46Q96FV0 321 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 ZC3HAV1LQ96H79 300 aaKnown RBP8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 SUSD3Q96L08 255 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 COQ10AQ96MF6 247 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 TRIM54Q9BYV2 358 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 BRD9Q9H8M2 597 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 EQTNQ9NQ60 294 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 OSER1Q9NX31 292 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 IMPAD1Q9NX62 359 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 ASH2LQ9UBL3 628 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 SLC39A10Q9ULF5 831 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 MIA3Q5JRA6 1907 aa8.91□□□□□ -0.98
SMARCAL1-202ENST00000358207 SHROOM3Q8TF72 1996 aa8.9□□□□□ -0.98
SMARCAL1-202ENST00000358207 A0A1W2PQH9 124 aa8.9□□□□□ -0.98
SMARCAL1-202ENST00000358207 ZNF729A6NN14 1252 aaPredicted RBP8.9□□□□□ -0.98
SMARCAL1-202ENST00000358207 TMEM189-UBE2V1I3L0A0 370 aa8.9□□□□□ -0.98
SMARCAL1-202ENST00000358207 PROM1O43490 865 aa8.9□□□□□ -0.98
SMARCAL1-202ENST00000358207 HCN1O60741 890 aa8.9□□□□□ -0.98
SMARCAL1-202ENST00000358207 SEC22BO75396 215 aa8.9□□□□□ -0.98
SMARCAL1-202ENST00000358207 SUPT7LO94864 414 aa8.9□□□□□ -0.98
SMARCAL1-202ENST00000358207 ENDOD1O94919 500 aa8.9□□□□□ -0.98
SMARCAL1-202ENST00000358207 SPP1P10451 314 aa8.9□□□□□ -0.98
SMARCAL1-202ENST00000358207 MATKP42679 507 aa8.9□□□□□ -0.98
SMARCAL1-202ENST00000358207 ATP4BP51164 291 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms