RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 KLF16Q9BXK1 252 aaPredicted RBP17.81■□□□□ 0.44
SCARF1-202ENST00000348987 ZFYVE1Q9HBF4 777 aa17.81■□□□□ 0.44
SCARF1-202ENST00000348987 LATS2Q9NRM7 1088 aa17.81■□□□□ 0.44
SCARF1-202ENST00000348987 DNAJC27Q9NZQ0 273 aa17.81■□□□□ 0.44
SCARF1-202ENST00000348987 TRPM5Q9NZQ8 1165 aa17.81■□□□□ 0.44
SCARF1-202ENST00000348987 OR51B4Q9Y5P0 310 aa17.81■□□□□ 0.44
SCARF1-202ENST00000348987 STK16O75716 305 aa17.81■□□□□ 0.44
SCARF1-202ENST00000348987 IL1AP01583 271 aa17.81■□□□□ 0.44
SCARF1-202ENST00000348987 COX7A2P14406 83 aa17.81■□□□□ 0.44
SCARF1-202ENST00000348987 SELPP16109 830 aa17.81■□□□□ 0.44
SCARF1-202ENST00000348987 EPORP19235 508 aa17.81■□□□□ 0.44
SCARF1-202ENST00000348987 ABRQ12979 859 aa17.81■□□□□ 0.44
SCARF1-202ENST00000348987 FAM122CQ6P4D5 195 aa17.81■□□□□ 0.44
SCARF1-202ENST00000348987 PLEKHM3Q6ZWE6 761 aa17.81■□□□□ 0.44
SCARF1-202ENST00000348987 TSPAN33Q86UF1 283 aa17.81■□□□□ 0.44
SCARF1-202ENST00000348987 ZC3HAV1LQ96H79 300 aaKnown RBP17.81■□□□□ 0.44
SCARF1-202ENST00000348987 B3GAT2Q9NPZ5 323 aa17.81■□□□□ 0.44
SCARF1-202ENST00000348987 C11orf16Q9NQ32 467 aa17.81■□□□□ 0.44
SCARF1-202ENST00000348987 ZNF224Q9NZL3 707 aa17.81■□□□□ 0.44
SCARF1-202ENST00000348987 PCDHB1Q9Y5F3 818 aa17.81■□□□□ 0.44
SCARF1-202ENST00000348987 SNX11Q9Y5W9 270 aa17.81■□□□□ 0.44
SCARF1-202ENST00000348987 AUP1Q9Y679 476 aa17.81■□□□□ 0.44
SCARF1-202ENST00000348987 LRRTM2O43300 516 aa17.8■□□□□ 0.44
SCARF1-202ENST00000348987 PRKAR1AP10644 381 aa17.8■□□□□ 0.44
SCARF1-202ENST00000348987 BPIP17213 487 aa17.8■□□□□ 0.44
SCARF1-202ENST00000348987 DDCP20711 480 aa17.8■□□□□ 0.44
SCARF1-202ENST00000348987 SMAD3P84022 425 aaKnown RBP17.8■□□□□ 0.44
SCARF1-202ENST00000348987 GANABQ14697 944 aaKnown RBP17.8■□□□□ 0.44
SCARF1-202ENST00000348987 ZXDCQ2QGD7 858 aaPredicted RBP17.8■□□□□ 0.44
SCARF1-202ENST00000348987 NOXRED1Q6NXP6 359 aa17.8■□□□□ 0.44
SCARF1-202ENST00000348987 BCDIN3DQ7Z5W3 292 aaKnown RBP17.8■□□□□ 0.44
SCARF1-202ENST00000348987 PDZD3Q86UT5 571 aa17.8■□□□□ 0.44
SCARF1-202ENST00000348987 SYT12Q8IV01 421 aa17.8■□□□□ 0.44
SCARF1-202ENST00000348987 NAGSQ8N159 534 aa17.8■□□□□ 0.44
SCARF1-202ENST00000348987 AKAP1Q92667 903 aaKnown RBP eCLIP17.8■□□□□ 0.44
SCARF1-202ENST00000348987 MARVELD1Q9BSK0 173 aa17.8■□□□□ 0.44
SCARF1-202ENST00000348987 SLC29A3Q9BZD2 475 aa17.8■□□□□ 0.44
SCARF1-202ENST00000348987 MBD1Q9UIS9 605 aaPredicted RBP17.8■□□□□ 0.44
SCARF1-202ENST00000348987 PCDHB11Q9Y5F2 797 aa17.8■□□□□ 0.44
SCARF1-202ENST00000348987 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.8■□□□□ 0.44
SCARF1-202ENST00000348987 PCDH7O60245 1069 aa17.8■□□□□ 0.44
SCARF1-202ENST00000348987 LGI1O95970 557 aa17.8■□□□□ 0.44
SCARF1-202ENST00000348987 HNF1BP35680 557 aa17.8■□□□□ 0.44
SCARF1-202ENST00000348987 CHRNA6Q15825 494 aa17.8■□□□□ 0.44
SCARF1-202ENST00000348987 GPRC6AQ5T6X5 926 aa17.8■□□□□ 0.44
SCARF1-202ENST00000348987 HSDL2Q6YN16 418 aa17.8■□□□□ 0.44
SCARF1-202ENST00000348987 ZNF782Q6ZMW2 699 aaPredicted RBP17.8■□□□□ 0.44
SCARF1-202ENST00000348987 CLDN22Q8N7P3 220 aa17.8■□□□□ 0.44
SCARF1-202ENST00000348987 AQP11Q8NBQ7 271 aa17.8■□□□□ 0.44
SCARF1-202ENST00000348987 TMEM145Q8NBT3 493 aa17.8■□□□□ 0.44
SCARF1-202ENST00000348987 PHF21AQ96BD5 680 aa17.8■□□□□ 0.44
SCARF1-202ENST00000348987 ALG14Q96F25 216 aa17.8■□□□□ 0.44
SCARF1-202ENST00000348987 SLC25A19Q9HC21 320 aa17.8■□□□□ 0.44
SCARF1-202ENST00000348987 CLEC4EQ9ULY5 219 aa17.8■□□□□ 0.44
SCARF1-202ENST00000348987 YARS2Q9Y2Z4 477 aaKnown RBP17.8■□□□□ 0.44
SCARF1-202ENST00000348987 ZAR1LA6NP61 321 aa17.79■□□□□ 0.44
SCARF1-202ENST00000348987 ORC5O43913 435 aa17.79■□□□□ 0.44
SCARF1-202ENST00000348987 GASTP01350 101 aa17.79■□□□□ 0.44
SCARF1-202ENST00000348987 LAMP1P11279 417 aa17.79■□□□□ 0.44
SCARF1-202ENST00000348987 GLULP15104 373 aa17.79■□□□□ 0.44
SCARF1-202ENST00000348987 RGS4P49798 205 aa17.79■□□□□ 0.44
SCARF1-202ENST00000348987 CYP4F8P98187 520 aa17.79■□□□□ 0.44
SCARF1-202ENST00000348987 SF1Q15637 639 aaKnown RBP17.79■□□□□ 0.44
SCARF1-202ENST00000348987 ZNF628Q5EBL2 1059 aa17.79■□□□□ 0.44
SCARF1-202ENST00000348987 CERS6Q6ZMG9 384 aa17.79■□□□□ 0.44
SCARF1-202ENST00000348987 FAM9CQ8IZT9 166 aa17.79■□□□□ 0.44
SCARF1-202ENST00000348987 RBFAQ8N0V3 343 aa17.79■□□□□ 0.44
SCARF1-202ENST00000348987 SYT14Q8NB59 555 aa17.79■□□□□ 0.44
SCARF1-202ENST00000348987 CMTM7Q96FZ5 175 aa17.79■□□□□ 0.44
SCARF1-202ENST00000348987 ANKRA2Q9H9E1 313 aa17.79■□□□□ 0.44
SCARF1-202ENST00000348987 RHCGQ9UBD6 479 aa17.79■□□□□ 0.44
SCARF1-202ENST00000348987 FTSJ1Q9UET6 329 aa17.79■□□□□ 0.44
SCARF1-202ENST00000348987 STOML2Q9UJZ1 356 aa17.79■□□□□ 0.44
SCARF1-202ENST00000348987 PIPP12273 146 aaPredicted RBP17.79■□□□□ 0.44
SCARF1-202ENST00000348987 AMD1P17707 334 aa17.79■□□□□ 0.44
SCARF1-202ENST00000348987 PRPS1L1P21108 318 aa17.79■□□□□ 0.44
SCARF1-202ENST00000348987 CRISP1P54107 249 aa17.79■□□□□ 0.44
SCARF1-202ENST00000348987 LEXMQ3ZCV2 418 aa17.79■□□□□ 0.44
SCARF1-202ENST00000348987 FRMPD2BQ6IN97 320 aa17.79■□□□□ 0.44
SCARF1-202ENST00000348987 ANGPTL8Q6UXH0 198 aa17.79■□□□□ 0.44
SCARF1-202ENST00000348987 RFLNAQ6ZTI6 216 aa17.79■□□□□ 0.44
SCARF1-202ENST00000348987 MSANTD1Q6ZTZ1 278 aa17.79■□□□□ 0.44
SCARF1-202ENST00000348987 DDX53Q86TM3 631 aaKnown RBP17.79■□□□□ 0.44
SCARF1-202ENST00000348987 LAS2Q8IYD9 372 aa17.79■□□□□ 0.44
SCARF1-202ENST00000348987 ZBTB2Q8N680 514 aa17.79■□□□□ 0.44
SCARF1-202ENST00000348987 LHFPL5Q8TAF8 219 aa17.79■□□□□ 0.44
SCARF1-202ENST00000348987 ZNF431Q8TF32 576 aaPredicted RBP17.79■□□□□ 0.44
SCARF1-202ENST00000348987 C2orf15Q8WU43 125 aaKnown RBP17.79■□□□□ 0.44
SCARF1-202ENST00000348987 KLHL6Q8WZ60 621 aa17.79■□□□□ 0.44
SCARF1-202ENST00000348987 KIAA1143Q96AT1 154 aaPredicted RBP17.79■□□□□ 0.44
SCARF1-202ENST00000348987 GPR137Q96N19 417 aa17.79■□□□□ 0.44
SCARF1-202ENST00000348987 NELL2Q99435 816 aa17.79■□□□□ 0.44
SCARF1-202ENST00000348987 MND1Q9BWT6 205 aa17.79■□□□□ 0.44
SCARF1-202ENST00000348987 CHST8Q9H2A9 424 aa17.79■□□□□ 0.44
SCARF1-202ENST00000348987 SPNS1Q9H2V7 528 aa17.79■□□□□ 0.44
SCARF1-202ENST00000348987 CREBZFQ9NS37 354 aa17.79■□□□□ 0.44
SCARF1-202ENST00000348987 AFF4Q9UHB7 1163 aaKnown RBP17.79■□□□□ 0.44
SCARF1-202ENST00000348987 MGAT4AQ9UM21 535 aa17.79■□□□□ 0.44
SCARF1-202ENST00000348987 C5orf42Q9H799 3197 aa17.78■□□□□ 0.44
SCARF1-202ENST00000348987 FAM227AF5H4B4 570 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms