RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 OR4F21O95013 312 aa14.24□□□□□ -0.13
PRKN-201ENST00000338468 SEMA3DO95025 777 aa14.24□□□□□ -0.13
PRKN-201ENST00000338468 DDAH2O95865 285 aa14.24□□□□□ -0.13
PRKN-201ENST00000338468 PROCP04070 461 aa14.24□□□□□ -0.13
PRKN-201ENST00000338468 UQCRHP07919 91 aa14.24□□□□□ -0.13
PRKN-201ENST00000338468 NUDT17P0C025 328 aa14.24□□□□□ -0.13
PRKN-201ENST00000338468 CPN2P22792 545 aa14.24□□□□□ -0.13
PRKN-201ENST00000338468 IGLV3-21P80748 117 aaPredicted RBP14.24□□□□□ -0.13
PRKN-201ENST00000338468 TNFRSF17Q02223 184 aa14.24□□□□□ -0.13
PRKN-201ENST00000338468 ID2Q02363 134 aa14.24□□□□□ -0.13
PRKN-201ENST00000338468 MRPL49Q13405 166 aaKnown RBP14.24□□□□□ -0.13
PRKN-201ENST00000338468 TUBA3CQ13748 450 aa14.24□□□□□ -0.13
PRKN-201ENST00000338468 MEP1AQ16819 746 aa14.24□□□□□ -0.13
PRKN-201ENST00000338468 TCHHL1Q5QJ38 904 aaPredicted RBP14.24□□□□□ -0.13
PRKN-201ENST00000338468 ZNF468Q5VIY5 522 aaPredicted RBP14.24□□□□□ -0.13
PRKN-201ENST00000338468 TUBA3EQ6PEY2 450 aa14.24□□□□□ -0.13
PRKN-201ENST00000338468 GPR180Q86V85 440 aa14.24□□□□□ -0.13
PRKN-201ENST00000338468 LGI4Q8N135 537 aa14.24□□□□□ -0.13
PRKN-201ENST00000338468 ARMC10Q8N2F6 343 aa14.24□□□□□ -0.13
PRKN-201ENST00000338468 SLC5A8Q8N695 610 aa14.24□□□□□ -0.13
PRKN-201ENST00000338468 MYRIPQ8NFW9 859 aa14.24□□□□□ -0.13
PRKN-201ENST00000338468 GRHL3Q8TE85 626 aa14.24□□□□□ -0.13
PRKN-201ENST00000338468 PTPMT1Q8WUK0 201 aaPredicted RBP14.24□□□□□ -0.13
PRKN-201ENST00000338468 UCN3Q969E3 161 aa14.24□□□□□ -0.13
PRKN-201ENST00000338468 SIGLEC12Q96PQ1 595 aa14.24□□□□□ -0.13
PRKN-201ENST00000338468 ZNF382Q96SR6 550 aa14.24□□□□□ -0.13
PRKN-201ENST00000338468 SERPINI1Q99574 410 aa14.24□□□□□ -0.13
PRKN-201ENST00000338468 CENPKQ9BS16 269 aa14.24□□□□□ -0.13
PRKN-201ENST00000338468 ALOXE3Q9BYJ1 711 aa14.24□□□□□ -0.13
PRKN-201ENST00000338468 CDCP1Q9H5V8 836 aa14.24□□□□□ -0.13
PRKN-201ENST00000338468 ADAP2Q9NPF8 381 aa14.24□□□□□ -0.13
PRKN-201ENST00000338468 MAP10Q9P2G4 905 aa14.24□□□□□ -0.13
PRKN-201ENST00000338468 VTI1BQ9UEU0 232 aa14.24□□□□□ -0.13
PRKN-201ENST00000338468 TRPS1Q9UHF7 1281 aa14.24□□□□□ -0.13
PRKN-201ENST00000338468 ABCA12Q86UK0 2595 aa14.24□□□□□ -0.13
PRKN-201ENST00000338468 DOPEY1Q5JWR5 2465 aa14.23□□□□□ -0.13
PRKN-201ENST00000338468 TRAV17A0A0B4J275 112 aa14.23□□□□□ -0.13
PRKN-201ENST00000338468 A0A1W2PR48 441 aa14.23□□□□□ -0.13
PRKN-201ENST00000338468 PROM1O43490 865 aa14.23□□□□□ -0.13
PRKN-201ENST00000338468 PRKNO60260 465 aaPredicted RBP14.23□□□□□ -0.13
PRKN-201ENST00000338468 PLIN3O60664 434 aa14.23□□□□□ -0.13
PRKN-201ENST00000338468 CBX6O95503 412 aa14.23□□□□□ -0.13
PRKN-201ENST00000338468 PDYNP01213 254 aa14.23□□□□□ -0.13
PRKN-201ENST00000338468 GBAP04062 536 aa14.23□□□□□ -0.13
PRKN-201ENST00000338468 RNF224P0DH78 156 aa14.23□□□□□ -0.13
PRKN-201ENST00000338468 KRT15P19012 456 aa14.23□□□□□ -0.13
PRKN-201ENST00000338468 CRHR1P34998 444 aa14.23□□□□□ -0.13
PRKN-201ENST00000338468 CD96P40200 585 aa14.23□□□□□ -0.13
PRKN-201ENST00000338468 MLF1P58340 268 aa14.23□□□□□ -0.13
PRKN-201ENST00000338468 SLC18A2Q05940 514 aa14.23□□□□□ -0.13
PRKN-201ENST00000338468 IFT88Q13099 833 aa14.23□□□□□ -0.13
PRKN-201ENST00000338468 NR6A1Q15406 480 aa14.23□□□□□ -0.13
PRKN-201ENST00000338468 ELAVL1Q15717 326 aaKnown RBP14.23□□□□□ -0.13
PRKN-201ENST00000338468 ERCC6LQ2NKX8 1250 aa14.23□□□□□ -0.13
PRKN-201ENST00000338468 SGO1Q5FBB7 561 aa14.23□□□□□ -0.13
PRKN-201ENST00000338468 C10orf62Q5T681 223 aaPredicted RBP14.23□□□□□ -0.13
PRKN-201ENST00000338468 TTC19Q6DKK2 380 aaPredicted RBP14.23□□□□□ -0.13
PRKN-201ENST00000338468 ZYG11AQ6WRX3 759 aa14.23□□□□□ -0.13
PRKN-201ENST00000338468 RPS19BP1Q86WX3 136 aaKnown RBP14.23□□□□□ -0.13
PRKN-201ENST00000338468 SLC22A9Q8IVM8 553 aa14.23□□□□□ -0.13
PRKN-201ENST00000338468 OR4N5Q8IXE1 308 aa14.23□□□□□ -0.13
PRKN-201ENST00000338468 MDS2Q8NDY4 140 aa14.23□□□□□ -0.13
PRKN-201ENST00000338468 CAVIN3Q969G5 261 aa14.23□□□□□ -0.13
PRKN-201ENST00000338468 NCLNQ969V3 563 aa14.23□□□□□ -0.13
PRKN-201ENST00000338468 TAAR6Q96RI8 345 aa14.23□□□□□ -0.13
PRKN-201ENST00000338468 MRPL1Q9BYD6 325 aaKnown RBP14.23□□□□□ -0.13
PRKN-201ENST00000338468 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.23□□□□□ -0.13
PRKN-201ENST00000338468 GSTO2Q9H4Y5 243 aa14.23□□□□□ -0.13
PRKN-201ENST00000338468 ELOVL6Q9H5J4 265 aa14.23□□□□□ -0.13
PRKN-201ENST00000338468 RPF2Q9H7B2 306 aaKnown RBP14.23□□□□□ -0.13
PRKN-201ENST00000338468 ANKRD10Q9NXR5 420 aa14.23□□□□□ -0.13
PRKN-201ENST00000338468 LRBAP50851 2863 aa14.23□□□□□ -0.13
PRKN-201ENST00000338468 TRBV11-1A0A0K0K1C0 115 aa14.22□□□□□ -0.13
PRKN-201ENST00000338468 TMEM200CA6NKL6 621 aa14.22□□□□□ -0.13
PRKN-201ENST00000338468 GABRR3A8MPY1 467 aa14.22□□□□□ -0.13
PRKN-201ENST00000338468 UBFD1O14562 309 aaKnown RBP14.22□□□□□ -0.13
PRKN-201ENST00000338468 PRAMEF2O60811 474 aa14.22□□□□□ -0.13
PRKN-201ENST00000338468 FAM58BPP0C7Q3 252 aa14.22□□□□□ -0.13
PRKN-201ENST00000338468 KRT4P19013 534 aa14.22□□□□□ -0.13
PRKN-201ENST00000338468 TPP2P29144 1249 aaPredicted RBP14.22□□□□□ -0.13
PRKN-201ENST00000338468 TAS2R50P59544 299 aa14.22□□□□□ -0.13
PRKN-201ENST00000338468 GALNT1Q10472 559 aaPredicted RBP14.22□□□□□ -0.13
PRKN-201ENST00000338468 TBL3Q12788 808 aaKnown RBP14.22□□□□□ -0.13
PRKN-201ENST00000338468 STX4Q12846 297 aa14.22□□□□□ -0.13
PRKN-201ENST00000338468 ESPL1Q14674 2120 aa14.22□□□□□ -0.13
PRKN-201ENST00000338468 ZNF324BQ6AW86 544 aaPredicted RBP14.22□□□□□ -0.13
PRKN-201ENST00000338468 EMBQ6PCB8 327 aa14.22□□□□□ -0.13
PRKN-201ENST00000338468 DGAT2L6Q6ZPD8 337 aa14.22□□□□□ -0.13
PRKN-201ENST00000338468 MAMDC2Q7Z304 686 aaPredicted RBP14.22□□□□□ -0.13
PRKN-201ENST00000338468 ZNF227Q86WZ6 799 aa14.22□□□□□ -0.13
PRKN-201ENST00000338468 NUDT13Q86X67 352 aa14.22□□□□□ -0.13
PRKN-201ENST00000338468 C4orf33Q8N1A6 199 aa14.22□□□□□ -0.13
PRKN-201ENST00000338468 ZNF321PQ8N8H1 164 aa14.22□□□□□ -0.13
PRKN-201ENST00000338468 CDYL2Q8N8U2 506 aa14.22□□□□□ -0.13
PRKN-201ENST00000338468 HBEGFQ99075 208 aa14.22□□□□□ -0.13
PRKN-201ENST00000338468 HES7Q9BYE0 225 aa14.22□□□□□ -0.13
PRKN-201ENST00000338468 PARD6BQ9BYG5 372 aa14.22□□□□□ -0.13
PRKN-201ENST00000338468 SLC29A3Q9BZD2 475 aa14.22□□□□□ -0.13
PRKN-201ENST00000338468 LYARQ9NX58 379 aaKnown RBP14.22□□□□□ -0.13
PRKN-201ENST00000338468 MS4A12Q9NXJ0 267 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms