RNA–Protein interactions for RNA: ENST00000336824.8

FNDC3B-201, Transcript of fibronectin type III domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3B, Length 7,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-201ENST00000336824 ANXA8P13928 327 aa8.88□□□□□ -0.99
FNDC3B-201ENST00000336824 DNAJA1P31689 397 aaKnown RBP8.88□□□□□ -0.99
FNDC3B-201ENST00000336824 MNX1P50219 401 aaPredicted RBP8.88□□□□□ -0.99
FNDC3B-201ENST00000336824 HSD11B2P80365 405 aa8.88□□□□□ -0.99
FNDC3B-201ENST00000336824 DEFB110Q30KQ9 67 aa8.88□□□□□ -0.99
FNDC3B-201ENST00000336824 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.88□□□□□ -0.993e-7■■■■■ 57.8
FNDC3B-201ENST00000336824 NANOGP8Q6NSW7 305 aa8.88□□□□□ -0.99
FNDC3B-201ENST00000336824 ARL14Q8N4G2 192 aa8.88□□□□□ -0.99
FNDC3B-201ENST00000336824 ACOT4Q8N9L9 421 aa8.88□□□□□ -0.99
FNDC3B-201ENST00000336824 OR5K1Q8NHB7 308 aa8.88□□□□□ -0.99
FNDC3B-201ENST00000336824 PHOSPHO1Q8TCT1 267 aa8.88□□□□□ -0.99
FNDC3B-201ENST00000336824 PDXPQ96GD0 296 aa8.88□□□□□ -0.99
FNDC3B-201ENST00000336824 NANOGQ9H9S0 305 aa8.88□□□□□ -0.99
FNDC3B-201ENST00000336824 MYNNQ9NPC7 610 aa8.88□□□□□ -0.99
FNDC3B-201ENST00000336824 TRBV5-4A0A0C4DH59 114 aa8.88□□□□□ -0.99
FNDC3B-201ENST00000336824 SLC5A10A0PJK1 596 aa8.88□□□□□ -0.99
FNDC3B-201ENST00000336824 GRXCR2A6NFK2 248 aa8.88□□□□□ -0.99
FNDC3B-201ENST00000336824 APOA1P02647 267 aa8.88□□□□□ -0.99
FNDC3B-201ENST00000336824 GP1BBP13224 206 aa8.88□□□□□ -0.99
FNDC3B-201ENST00000336824 GMPRP36959 345 aa8.88□□□□□ -0.99
FNDC3B-201ENST00000336824 KCNC4Q03721 635 aa8.88□□□□□ -0.99
FNDC3B-201ENST00000336824 PTGES3Q15185 160 aaKnown RBP8.88□□□□□ -0.99
FNDC3B-201ENST00000336824 BROXQ5VW32 411 aa8.88□□□□□ -0.99
FNDC3B-201ENST00000336824 MINDY1Q8N5J2 469 aa8.88□□□□□ -0.99
FNDC3B-201ENST00000336824 APIPQ96GX9 242 aa8.88□□□□□ -0.99
FNDC3B-201ENST00000336824 GRIP2Q9C0E4 1043 aa8.88□□□□□ -0.99
FNDC3B-201ENST00000336824 BCKDKO14874 412 aa8.88□□□□□ -0.99
FNDC3B-201ENST00000336824 H1F0P07305 194 aaKnown RBP8.88□□□□□ -0.99
FNDC3B-201ENST00000336824 THRBP10828 461 aa8.88□□□□□ -0.99
FNDC3B-201ENST00000336824 NR2C1P13056 603 aa8.88□□□□□ -0.99
FNDC3B-201ENST00000336824 IL9P15248 144 aa8.88□□□□□ -0.99
FNDC3B-201ENST00000336824 GSTM3P21266 225 aa8.88□□□□□ -0.99
FNDC3B-201ENST00000336824 GABRA3P34903 492 aa8.88□□□□□ -0.99
FNDC3B-201ENST00000336824 SYT16Q17RD7 645 aa8.88□□□□□ -0.99
FNDC3B-201ENST00000336824 ZNF440Q8IYI8 595 aa8.88□□□□□ -0.99
FNDC3B-201ENST00000336824 OR7A2PQ8NGA2 310 aa8.88□□□□□ -0.99
FNDC3B-201ENST00000336824 OR52J3Q8NH60 311 aa8.88□□□□□ -0.99
FNDC3B-201ENST00000336824 MOSPD2Q8NHP6 518 aa8.88□□□□□ -0.99
FNDC3B-201ENST00000336824 ARHGAP9Q9BRR9 750 aa8.88□□□□□ -0.99
FNDC3B-201ENST00000336824 SLC39A3Q9BRY0 314 aa8.88□□□□□ -0.99
FNDC3B-201ENST00000336824 DENND2DQ9H6A0 471 aaPredicted RBP8.88□□□□□ -0.99
FNDC3B-201ENST00000336824 GSTK1Q9Y2Q3 226 aa8.88□□□□□ -0.99
FNDC3B-201ENST00000336824 PTGDR2Q9Y5Y4 395 aa8.88□□□□□ -0.99
FNDC3B-201ENST00000336824 METTL12A8MUP2 240 aa8.88□□□□□ -0.99
FNDC3B-201ENST00000336824 E7ENX8 843 aa8.88□□□□□ -0.99
FNDC3B-201ENST00000336824 CHN2P52757 468 aa8.88□□□□□ -0.99
FNDC3B-201ENST00000336824 TMEM107Q6UX40 140 aa8.88□□□□□ -0.99
FNDC3B-201ENST00000336824 HORMAD2Q8N7B1 307 aa8.88□□□□□ -0.99
FNDC3B-201ENST00000336824 HOXD1Q9GZZ0 328 aa8.88□□□□□ -0.99
FNDC3B-201ENST00000336824 FGF22Q9HCT0 170 aa8.88□□□□□ -0.99
FNDC3B-201ENST00000336824 SDR39U1Q9NRG7 319 aaPredicted RBP8.88□□□□□ -0.99
FNDC3B-201ENST00000336824 SLC39A1Q9NY26 324 aa8.88□□□□□ -0.99
FNDC3B-201ENST00000336824 B4GALT7Q9UBV7 327 aa8.88□□□□□ -0.99
FNDC3B-201ENST00000336824 RAB26Q9ULW5 256 aa8.88□□□□□ -0.99
FNDC3B-201ENST00000336824 HOXC12P31275 282 aa8.87□□□□□ -0.99
FNDC3B-201ENST00000336824 SLC5A12Q1EHB4 618 aa8.87□□□□□ -0.99
FNDC3B-201ENST00000336824 VN1R5Q7Z5H4 357 aa8.87□□□□□ -0.99
FNDC3B-201ENST00000336824 PNPLA1Q8N8W4 532 aa8.87□□□□□ -0.99
FNDC3B-201ENST00000336824 FAM156AQ8NDB6 213 aa8.87□□□□□ -0.99
FNDC3B-201ENST00000336824 CIB1Q99828 191 aa8.87□□□□□ -0.99
FNDC3B-201ENST00000336824 FAM53CQ9NYF3 392 aa8.87□□□□□ -0.99
FNDC3B-201ENST00000336824 PCDH10Q9P2E7 1040 aa8.87□□□□□ -0.99
FNDC3B-201ENST00000336824 GIMAP2Q9UG22 337 aa8.87□□□□□ -0.99
FNDC3B-201ENST00000336824 POM121BA6NF01 834 aa8.87□□□□□ -0.99
FNDC3B-201ENST00000336824 STX11O75558 287 aa8.87□□□□□ -0.99
FNDC3B-201ENST00000336824 CCNA2P20248 432 aa8.87□□□□□ -0.99
FNDC3B-201ENST00000336824 SNAPC1Q16533 368 aa8.87□□□□□ -0.99
FNDC3B-201ENST00000336824 YOD1Q5VVQ6 348 aaPredicted RBP8.87□□□□□ -0.99
FNDC3B-201ENST00000336824 OLIG1Q8TAK6 271 aa8.87□□□□□ -0.99
FNDC3B-201ENST00000336824 SLC37A2Q8TED4 501 aa8.87□□□□□ -0.99
FNDC3B-201ENST00000336824 WDR60Q8WVS4 1066 aa8.87□□□□□ -0.99
FNDC3B-201ENST00000336824 MS4A4EQ96PG1 132 aa8.87□□□□□ -0.99
FNDC3B-201ENST00000336824 CRB3Q9BUF7 120 aa8.87□□□□□ -0.99
FNDC3B-201ENST00000336824 ACPTQ9BZG2 426 aa8.87□□□□□ -0.99
FNDC3B-201ENST00000336824 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.87□□□□□ -0.992e-8■■■□□ 15.5
FNDC3B-201ENST00000336824 MKL2Q9ULH7 1088 aa8.87□□□□□ -0.99
FNDC3B-201ENST00000336824 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.87□□□□□ -0.99
FNDC3B-201ENST00000336824 TMEM202A6NGA9 273 aa8.87□□□□□ -0.99
FNDC3B-201ENST00000336824 RTCAO00442 366 aaKnown RBP8.87□□□□□ -0.99
FNDC3B-201ENST00000336824 RNASET2O00584 256 aaKnown RBP8.87□□□□□ -0.99
FNDC3B-201ENST00000336824 AKAP8O43823 692 aaKnown RBP8.87□□□□□ -0.99
FNDC3B-201ENST00000336824 IGHEP01854 428 aa8.87□□□□□ -0.99
FNDC3B-201ENST00000336824 GGT5P36269 586 aa8.87□□□□□ -0.99
FNDC3B-201ENST00000336824 RPS9P46781 194 aaKnown RBP8.87□□□□□ -0.99
FNDC3B-201ENST00000336824 CASP9P55211 416 aa8.87□□□□□ -0.99
FNDC3B-201ENST00000336824 LIN52Q52LA3 116 aa8.87□□□□□ -0.99
FNDC3B-201ENST00000336824 KLHL12Q53G59 568 aa8.87□□□□□ -0.99
FNDC3B-201ENST00000336824 C6orf120Q7Z4R8 191 aa8.87□□□□□ -0.99
FNDC3B-201ENST00000336824 BPIFB6Q8NFQ5 453 aa8.87□□□□□ -0.99
FNDC3B-201ENST00000336824 PJA1Q8NG27 643 aa8.87□□□□□ -0.99
FNDC3B-201ENST00000336824 FAM110BQ8TC76 370 aa8.87□□□□□ -0.99
FNDC3B-201ENST00000336824 ZNF304Q9HCX3 659 aa8.87□□□□□ -0.99
FNDC3B-201ENST00000336824 TM9SF3Q9HD45 589 aa8.87□□□□□ -0.99
FNDC3B-201ENST00000336824 TMEM5Q9Y2B1 443 aa8.87□□□□□ -0.99
FNDC3B-201ENST00000336824 DOCK6Q96HP0 2047 aa8.87□□□□□ -0.99
FNDC3B-201ENST00000336824 PCDHGA12O60330 932 aa8.87□□□□□ -0.99
FNDC3B-201ENST00000336824 PKLRP30613 574 aa8.87□□□□□ -0.99
FNDC3B-201ENST00000336824 MAGEA12P43365 314 aa8.87□□□□□ -0.99
FNDC3B-201ENST00000336824 TBC1D25Q3MII6 688 aa8.87□□□□□ -0.99
FNDC3B-201ENST00000336824 LCN1P1Q5VSP4 162 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms