RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 CSF3RQ99062 836 aa5.57□□□□□ -1.52
SSX3-201ENST00000298396 C17orf62Q9BQA9 187 aa5.57□□□□□ -1.52
SSX3-201ENST00000298396 YIPF2Q9BWQ6 316 aa5.57□□□□□ -1.52
SSX3-201ENST00000298396 REXO4Q9GZR2 422 aaKnown RBP5.57□□□□□ -1.52
SSX3-201ENST00000298396 C7orf69Q9H7B7 122 aa5.57□□□□□ -1.52
SSX3-201ENST00000298396 THSD1Q9NS62 852 aa5.57□□□□□ -1.52
SSX3-201ENST00000298396 LANCL2Q9NS86 450 aa5.57□□□□□ -1.52
SSX3-201ENST00000298396 INTS9Q9NV88 658 aaKnown RBP5.57□□□□□ -1.52
SSX3-201ENST00000298396 PSD3Q9NYI0 1048 aa5.57□□□□□ -1.52
SSX3-201ENST00000298396 KCMF1Q9P0J7 381 aa5.57□□□□□ -1.52
SSX3-201ENST00000298396 HCN3Q9P1Z3 774 aa5.57□□□□□ -1.52
SSX3-201ENST00000298396 IL17BQ9UHF5 180 aa5.57□□□□□ -1.52
SSX3-201ENST00000298396 CROTQ9UKG9 612 aa5.57□□□□□ -1.52
SSX3-201ENST00000298396 SRPK3Q9UPE1 567 aa5.57□□□□□ -1.52
SSX3-201ENST00000298396 STK38LQ9Y2H1 464 aa5.57□□□□□ -1.52
SSX3-201ENST00000298396 RAP2CQ9Y3L5 183 aa5.57□□□□□ -1.52
SSX3-201ENST00000298396 TRAF6Q9Y4K3 522 aa5.57□□□□□ -1.52
SSX3-201ENST00000298396 CLDN16Q9Y5I7 305 aa5.57□□□□□ -1.52
SSX3-201ENST00000298396 MRPS18BQ9Y676 258 aaKnown RBP5.57□□□□□ -1.52
SSX3-201ENST00000298396 NINQ8N4C6 2090 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 VSTM2BA6NLU5 285 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 WASHC1A8K0Z3 465 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 NPIPB8E9PQR5 432 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 FAM227AF5H4B4 570 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 STMND1H3BQB6 276 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 SDHDO14521 159 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 TXNDC9O14530 226 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 LSM1O15116 133 aaKnown RBP5.56□□□□□ -1.52
SSX3-201ENST00000298396 CHST10O43529 356 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 ULK1O75385 1050 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 SKAP2O75563 359 aaPredicted RBP5.56□□□□□ -1.52
SSX3-201ENST00000298396 PRKRAO75569 313 aaKnown RBP5.56□□□□□ -1.52
SSX3-201ENST00000298396 SEMA3DO95025 777 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 HSPA4LO95757 839 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 KRT6AP02538 564 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 GBAP04062 536 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 KRT6BP04259 564 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 UMODP07911 640 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 LINC00032P0C843 101 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 PRR35P0CG20 571 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 LIPCP11150 499 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 LIFP15018 202 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 FBLP22087 321 aaKnown RBP5.56□□□□□ -1.52
SSX3-201ENST00000298396 HIST1H1TP22492 207 aaPredicted RBP5.56□□□□□ -1.52
SSX3-201ENST00000298396 PRPH2P23942 346 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 PTX3P26022 381 aaPredicted RBP5.56□□□□□ -1.52
SSX3-201ENST00000298396 CD82P27701 267 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 KRT6CP48668 564 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 RPL14P50914 215 aaKnown RBP5.56□□□□□ -1.52
SSX3-201ENST00000298396 HK2P52789 917 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 ARSFP54793 590 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 LIM2P55344 173 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 STXBP1P61764 594 aaKnown RBP5.56□□□□□ -1.52
SSX3-201ENST00000298396 BTN3A2P78410 334 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 DCDP81605 110 aaKnown RBP5.56□□□□□ -1.52
SSX3-201ENST00000298396 CSTF3Q12996 717 aaKnown RBP5.56□□□□□ -1.52
SSX3-201ENST00000298396 IFT88Q13099 833 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 DNASE1L3Q13609 305 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 CUL3Q13618 768 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 IL10RAQ13651 578 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 DOC2BQ14184 412 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 ERV3-1Q14264 604 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 HERC3Q15034 1050 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 KIAA0040Q15053 153 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 PDCD2Q16342 344 aaPredicted RBP5.56□□□□□ -1.52
SSX3-201ENST00000298396 NKG7Q16617 165 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 PRSS53Q2L4Q9 553 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 MUM1Q2TAK8 710 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 TMEM35AQ53FP2 167 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 VWA5B1Q5TIE3 1220 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 TTC19Q6DKK2 380 aaPredicted RBP5.56□□□□□ -1.52
SSX3-201ENST00000298396 OR4C11Q6IEV9 310 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 CYB5D1Q6P9G0 228 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 BEND4Q6ZU67 534 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 COMMD6Q7Z4G1 85 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 CACNA2D3Q8IZS8 1091 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 NLGN4XQ8N0W4 816 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 CLYBLQ8N0X4 340 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 METTL4Q8N3J2 472 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 TBC1D19Q8N5T2 526 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 C1orf52Q8N6N3 182 aaKnown RBP5.56□□□□□ -1.52
SSX3-201ENST00000298396 ENDOVQ8N8Q3 282 aaKnown RBP5.56□□□□□ -1.52
SSX3-201ENST00000298396 ACOT4Q8N9L9 421 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 NLGN4YQ8NFZ3 816 aaPredicted RBP5.56□□□□□ -1.52
SSX3-201ENST00000298396 PPP1R14CQ8TAE6 165 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 PROKR1Q8TCW9 393 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 FBLIM1Q8WUP2 373 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 FGF11Q92914 225 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 MR1Q95460 341 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 RGMAQ96B86 450 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 REPS1Q96D71 796 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 CLIP3Q96DZ5 547 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 MVB12AQ96EY5 273 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 MMABQ96EY8 250 aaPredicted RBP5.56□□□□□ -1.52
SSX3-201ENST00000298396 NAF1Q96HR8 494 aaKnown RBP5.56□□□□□ -1.52
SSX3-201ENST00000298396 SLC45A3Q96JT2 553 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 FCRL1Q96LA6 429 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 MAGEB10Q96LZ2 347 aaPredicted RBP5.56□□□□□ -1.52
SSX3-201ENST00000298396 MAGEB18Q96M61 343 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 C7orf26Q96N11 449 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms