RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 FZD3Q9NPG1 666 aa9.87□□□□□ -0.83
UPF3B-201ENST00000276201 FARSBQ9NSD9 589 aaKnown RBP9.87□□□□□ -0.83
UPF3B-201ENST00000276201 GPRC5BQ9NZH0 403 aa9.87□□□□□ -0.83
UPF3B-201ENST00000276201 BTNL2Q9UIR0 455 aa9.87□□□□□ -0.83
UPF3B-201ENST00000276201 PCDHB11Q9Y5F2 797 aa9.87□□□□□ -0.83
UPF3B-201ENST00000276201 RAI2Q9Y5P3 530 aa9.87□□□□□ -0.83
UPF3B-201ENST00000276201 EML5Q05BV3 1969 aa9.87□□□□□ -0.83
UPF3B-201ENST00000276201 VPS13AQ96RL7 3174 aa9.87□□□□□ -0.83
UPF3B-201ENST00000276201 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.86□□□□□ -0.83
UPF3B-201ENST00000276201 HRO43593 1189 aa9.86□□□□□ -0.83
UPF3B-201ENST00000276201 STK16O75716 305 aa9.86□□□□□ -0.83
UPF3B-201ENST00000276201 SCG5P05408 212 aa9.86□□□□□ -0.83
UPF3B-201ENST00000276201 STSP08842 583 aa9.86□□□□□ -0.83
UPF3B-201ENST00000276201 IL7P13232 177 aa9.86□□□□□ -0.83
UPF3B-201ENST00000276201 CTSOP43234 321 aaPredicted RBP9.86□□□□□ -0.83
UPF3B-201ENST00000276201 RGRP47804 291 aa9.86□□□□□ -0.83
UPF3B-201ENST00000276201 HMGA2P52926 109 aa9.86□□□□□ -0.83
UPF3B-201ENST00000276201 P2RX3P56373 397 aa9.86□□□□□ -0.83
UPF3B-201ENST00000276201 ST3GAL4Q11206 333 aa9.86□□□□□ -0.83
UPF3B-201ENST00000276201 SLC14A1Q13336 389 aa9.86□□□□□ -0.83
UPF3B-201ENST00000276201 ZNF177Q13360 481 aaPredicted RBP9.86□□□□□ -0.83
UPF3B-201ENST00000276201 LAPTM4AQ15012 233 aa9.86□□□□□ -0.83
UPF3B-201ENST00000276201 TBRG1Q3YBR2 411 aa9.86□□□□□ -0.83
UPF3B-201ENST00000276201 FNDC3BQ53EP0 1204 aaKnown RBP9.86□□□□□ -0.83
UPF3B-201ENST00000276201 GPRC6AQ5T6X5 926 aa9.86□□□□□ -0.83
UPF3B-201ENST00000276201 NXNL2Q5VZ03 156 aa9.86□□□□□ -0.83
UPF3B-201ENST00000276201 SDE2Q6IQ49 451 aa9.86□□□□□ -0.83
UPF3B-201ENST00000276201 ZNF438Q7Z4V0 828 aa9.86□□□□□ -0.83
UPF3B-201ENST00000276201 CAMKMTQ7Z624 323 aa9.86□□□□□ -0.83
UPF3B-201ENST00000276201 VTCN1Q7Z7D3 282 aa9.86□□□□□ -0.83
UPF3B-201ENST00000276201 VWA5B2Q8N398 1253 aa9.86□□□□□ -0.83
UPF3B-201ENST00000276201 GDPD1Q8N9F7 314 aa9.86□□□□□ -0.83
UPF3B-201ENST00000276201 ZFAND1Q8TCF1 268 aa9.86□□□□□ -0.83
UPF3B-201ENST00000276201 HCAR2Q8TDS4 363 aa9.86□□□□□ -0.83
UPF3B-201ENST00000276201 BTN2A2Q8WVV5 523 aa9.86□□□□□ -0.83
UPF3B-201ENST00000276201 HMGB4Q8WW32 186 aa9.86□□□□□ -0.83
UPF3B-201ENST00000276201 ASB15Q8WXK1 588 aa9.86□□□□□ -0.83
UPF3B-201ENST00000276201 ALG14Q96F25 216 aa9.86□□□□□ -0.83
UPF3B-201ENST00000276201 CHCHD6Q9BRQ6 235 aa9.86□□□□□ -0.83
UPF3B-201ENST00000276201 DOHHQ9BU89 302 aa9.86□□□□□ -0.83
UPF3B-201ENST00000276201 TPSD1Q9BZJ3 242 aa9.86□□□□□ -0.83
UPF3B-201ENST00000276201 SLC32A1Q9H598 525 aa9.86□□□□□ -0.83
UPF3B-201ENST00000276201 POLMQ9NP87 494 aaPredicted RBP9.86□□□□□ -0.83
UPF3B-201ENST00000276201 SEC14L4Q9UDX3 406 aa9.86□□□□□ -0.83
UPF3B-201ENST00000276201 STUB1Q9UNE7 303 aa9.86□□□□□ -0.83
UPF3B-201ENST00000276201 SNX7Q9UNH6 387 aa9.86□□□□□ -0.83
UPF3B-201ENST00000276201 OR51B4Q9Y5P0 310 aa9.86□□□□□ -0.83
UPF3B-201ENST00000276201 ZFHX2Q9C0A1 2572 aaPredicted RBP9.86□□□□□ -0.83
UPF3B-201ENST00000276201 LOC100506127A0A0U1RQW1 187 aa9.86□□□□□ -0.83
UPF3B-201ENST00000276201 MAGEB17A8MXT2 336 aa9.86□□□□□ -0.83
UPF3B-201ENST00000276201 TMEM229AB2RXF0 380 aa9.86□□□□□ -0.83
UPF3B-201ENST00000276201 FPGTO14772 594 aa9.86□□□□□ -0.83
UPF3B-201ENST00000276201 FFAR3O14843 346 aa9.86□□□□□ -0.83
UPF3B-201ENST00000276201 GPR42O15529 346 aa9.86□□□□□ -0.83
UPF3B-201ENST00000276201 TPD52L2O43399 206 aaKnown RBP9.86□□□□□ -0.83
UPF3B-201ENST00000276201 SUV39H1O43463 412 aa9.86□□□□□ -0.83
UPF3B-201ENST00000276201 FZD6O60353 706 aa9.86□□□□□ -0.83
UPF3B-201ENST00000276201 PDYNP01213 254 aa9.86□□□□□ -0.83
UPF3B-201ENST00000276201 VIPP01282 170 aa9.86□□□□□ -0.83
UPF3B-201ENST00000276201 HLA-EP13747 358 aa9.86□□□□□ -0.83
UPF3B-201ENST00000276201 AMD1P17707 334 aa9.86□□□□□ -0.83
UPF3B-201ENST00000276201 GABRG2P18507 467 aa9.86□□□□□ -0.83
UPF3B-201ENST00000276201 PSPHP78330 225 aa9.86□□□□□ -0.83
UPF3B-201ENST00000276201 SCN1BQ07699 218 aa9.86□□□□□ -0.83
UPF3B-201ENST00000276201 CKAP5Q14008 2032 aa9.86□□□□□ -0.83
UPF3B-201ENST00000276201 CCDC58Q4VC31 144 aa9.86□□□□□ -0.83
UPF3B-201ENST00000276201 GPAT3Q53EU6 434 aa9.86□□□□□ -0.83
UPF3B-201ENST00000276201 PTRHD1Q6GMV3 140 aaKnown RBP9.86□□□□□ -0.83
UPF3B-201ENST00000276201 NCEH1Q6PIU2 408 aa9.86□□□□□ -0.83
UPF3B-201ENST00000276201 SERPINA13PQ6UXR4 307 aa9.86□□□□□ -0.83
UPF3B-201ENST00000276201 TSEN54Q7Z6J9 526 aaKnown RBP9.86□□□□□ -0.83
UPF3B-201ENST00000276201 ZBTB2Q8N680 514 aa9.86□□□□□ -0.83
UPF3B-201ENST00000276201 LPCAT1Q8NF37 534 aa9.86□□□□□ -0.83
UPF3B-201ENST00000276201 JPH3Q8WXH2 748 aaPredicted RBP9.86□□□□□ -0.83
UPF3B-201ENST00000276201 PIEZO1Q92508 2521 aa9.86□□□□□ -0.83
UPF3B-201ENST00000276201 MYO19Q96H55 970 aa9.86□□□□□ -0.83
UPF3B-201ENST00000276201 ZC3HAV1LQ96H79 300 aaKnown RBP9.86□□□□□ -0.83
UPF3B-201ENST00000276201 MRGPRX3Q96LB0 322 aa9.86□□□□□ -0.83
UPF3B-201ENST00000276201 KCNC2Q96PR1 638 aa9.86□□□□□ -0.83
UPF3B-201ENST00000276201 MGLLQ99685 303 aa9.86□□□□□ -0.83
UPF3B-201ENST00000276201 NDOR1Q9UHB4 597 aa9.86□□□□□ -0.83
UPF3B-201ENST00000276201 LSM2Q9Y333 95 aaKnown RBP9.86□□□□□ -0.83
UPF3B-201ENST00000276201 PLXNB3Q9ULL4 1909 aa9.85□□□□□ -0.83
UPF3B-201ENST00000276201 TNFRSF11BO00300 401 aa9.85□□□□□ -0.83
UPF3B-201ENST00000276201 EPORP19235 508 aa9.85□□□□□ -0.83
UPF3B-201ENST00000276201 HMGCLP35914 325 aa9.85□□□□□ -0.83
UPF3B-201ENST00000276201 RORCP51449 518 aa9.85□□□□□ -0.83
UPF3B-201ENST00000276201 IKZF1Q13422 519 aa9.85□□□□□ -0.83
UPF3B-201ENST00000276201 TNK1Q13470 666 aa9.85□□□□□ -0.83
UPF3B-201ENST00000276201 MICAQ29983 383 aa9.85□□□□□ -0.83
UPF3B-201ENST00000276201 GLYR1Q49A26 553 aaPredicted RBP9.85□□□□□ -0.83
UPF3B-201ENST00000276201 TMEM201Q5SNT2 666 aa9.85□□□□□ -0.83
UPF3B-201ENST00000276201 ARMC4Q5T2S8 1044 aa9.85□□□□□ -0.83
UPF3B-201ENST00000276201 RNF219Q5W0B1 726 aaPredicted RBP9.85□□□□□ -0.83
UPF3B-201ENST00000276201 TMPRSS11AQ6ZMR5 421 aa9.85□□□□□ -0.83
UPF3B-201ENST00000276201 FAM92BQ6ZTR7 304 aa9.85□□□□□ -0.83
UPF3B-201ENST00000276201 SLC44A2Q8IWA5 706 aaPredicted RBP9.85□□□□□ -0.83
UPF3B-201ENST00000276201 ZNF366Q8N895 744 aa9.85□□□□□ -0.83
UPF3B-201ENST00000276201 OR10G2Q8NGC3 310 aa9.85□□□□□ -0.83
UPF3B-201ENST00000276201 EGFL8Q99944 293 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms