RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 FRKP42685 505 aaPredicted RBP10.76□□□□□ -0.69
CHFR-201ENST00000266880 POLR2HP52434 150 aaKnown RBP10.76□□□□□ -0.69
CHFR-201ENST00000266880 RRAS2P62070 204 aaPredicted RBP10.76□□□□□ -0.69
CHFR-201ENST00000266880 ITPRIPL2Q3MIP1 535 aa10.76□□□□□ -0.69
CHFR-201ENST00000266880 C9orf57Q5W0N0 161 aa10.76□□□□□ -0.69
CHFR-201ENST00000266880 CEP68Q76N32 757 aa10.76□□□□□ -0.69
CHFR-201ENST00000266880 NOXA1Q86UR1 476 aa10.76□□□□□ -0.69
CHFR-201ENST00000266880 OR9I1Q8NGQ6 314 aa10.76□□□□□ -0.69
CHFR-201ENST00000266880 SAT2Q96F10 170 aaPredicted RBP10.76□□□□□ -0.69
CHFR-201ENST00000266880 FCF1Q9Y324 198 aaKnown RBP10.76□□□□□ -0.69
CHFR-201ENST00000266880 DIRAS3O95661 229 aa10.76□□□□□ -0.69
CHFR-201ENST00000266880 OR1E2P47887 323 aa10.76□□□□□ -0.69
CHFR-201ENST00000266880 GID4Q8IVV7 300 aa10.76□□□□□ -0.69
CHFR-201ENST00000266880 BTN2A3PQ96KV6 586 aa10.76□□□□□ -0.69
CHFR-201ENST00000266880 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.76□□□□□ -0.695e-6■■□□□ 11.5
CHFR-201ENST00000266880 SLC25A51Q9H1U9 297 aa10.76□□□□□ -0.69
CHFR-201ENST00000266880 NEMP2A6NFY4 417 aa10.76□□□□□ -0.69
CHFR-201ENST00000266880 APOA2P02652 100 aa10.76□□□□□ -0.69
CHFR-201ENST00000266880 SSTR2P30874 369 aa10.76□□□□□ -0.69
CHFR-201ENST00000266880 BDKRB1P46663 353 aa10.76□□□□□ -0.69
CHFR-201ENST00000266880 WDR4P57081 412 aaKnown RBP10.76□□□□□ -0.69
CHFR-201ENST00000266880 RELAQ04206 551 aa10.76□□□□□ -0.69
CHFR-201ENST00000266880 PTPRRQ15256 657 aa10.76□□□□□ -0.69
CHFR-201ENST00000266880 SPIN4Q56A73 249 aa10.76□□□□□ -0.69
CHFR-201ENST00000266880 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.76□□□□□ -0.693e-7■■■■□ 21.6
CHFR-201ENST00000266880 KCNQ5Q9NR82 932 aa10.76□□□□□ -0.69
CHFR-201ENST00000266880 TEX10Q9NXF1 929 aaPredicted RBP10.76□□□□□ -0.69
CHFR-201ENST00000266880 ATXN7L1Q9ULK2 861 aaPredicted RBP10.76□□□□□ -0.69
CHFR-201ENST00000266880 SNAPINO95295 136 aa10.76□□□□□ -0.69
CHFR-201ENST00000266880 ZNF41P51814 821 aaPredicted RBP10.76□□□□□ -0.69
CHFR-201ENST00000266880 GDF10P55107 478 aa10.76□□□□□ -0.69
CHFR-201ENST00000266880 PLGLB1Q02325 96 aa10.76□□□□□ -0.69
CHFR-201ENST00000266880 EPGNQ6UW88 154 aa10.76□□□□□ -0.69
CHFR-201ENST00000266880 ABHD13Q7L211 337 aa10.76□□□□□ -0.69
CHFR-201ENST00000266880 CACNG6Q9BXT2 260 aa10.76□□□□□ -0.69
CHFR-201ENST00000266880 DKKL1Q9UK85 242 aa10.76□□□□□ -0.69
CHFR-201ENST00000266880 ATG4BQ9Y4P1 393 aa10.76□□□□□ -0.69
CHFR-201ENST00000266880 HEBP2Q9Y5Z4 205 aa10.76□□□□□ -0.69
CHFR-201ENST00000266880 CSNK2A2P19784 350 aaPredicted RBP10.75□□□□□ -0.69
CHFR-201ENST00000266880 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.75□□□□□ -0.69
CHFR-201ENST00000266880 METTL2BQ6P1Q9 378 aaKnown RBP10.75□□□□□ -0.69
CHFR-201ENST00000266880 OR2T35Q8NGX2 323 aa10.75□□□□□ -0.69
CHFR-201ENST00000266880 METTL2AQ96IZ6 378 aaKnown RBP10.75□□□□□ -0.69
CHFR-201ENST00000266880 OR4K3Q96R72 315 aa10.75□□□□□ -0.69
CHFR-201ENST00000266880 ADAMTS10Q9H324 1103 aa10.75□□□□□ -0.69
CHFR-201ENST00000266880 HCN4Q9Y3Q4 1203 aa10.75□□□□□ -0.69
CHFR-201ENST00000266880 DNMT3AQ9Y6K1 912 aaPredicted RBP10.75□□□□□ -0.69
CHFR-201ENST00000266880 RPS10-NUDT3A0A1W2PQS6 291 aa10.75□□□□□ -0.69
CHFR-201ENST00000266880 BMP8BP34820 402 aa10.75□□□□□ -0.69
CHFR-201ENST00000266880 RPS10P46783 165 aaKnown RBP10.75□□□□□ -0.69
CHFR-201ENST00000266880 AKR1C2P52895 323 aa10.75□□□□□ -0.69
CHFR-201ENST00000266880 TAF10Q12962 218 aa10.75□□□□□ -0.69
CHFR-201ENST00000266880 ATP6AP1Q15904 470 aa10.75□□□□□ -0.69
CHFR-201ENST00000266880 SLC36A3Q495N2 470 aa10.75□□□□□ -0.69
CHFR-201ENST00000266880 SSX7Q7RTT5 188 aa10.75□□□□□ -0.69
CHFR-201ENST00000266880 BMP8AQ7Z5Y6 402 aa10.75□□□□□ -0.69
CHFR-201ENST00000266880 OR56A1Q8NGH5 318 aa10.75□□□□□ -0.69
CHFR-201ENST00000266880 PXYLP1Q8TE99 480 aa10.75□□□□□ -0.69
CHFR-201ENST00000266880 NKD2Q969F2 451 aaPredicted RBP10.75□□□□□ -0.69
CHFR-201ENST00000266880 BSCL2Q96G97 398 aaPredicted RBP10.75□□□□□ -0.69
CHFR-201ENST00000266880 SCPEP1Q9HB40 452 aa10.75□□□□□ -0.69
CHFR-201ENST00000266880 RRAGCQ9HB90 399 aa10.75□□□□□ -0.69
CHFR-201ENST00000266880 ZDHHC2Q9UIJ5 367 aa10.75□□□□□ -0.69
CHFR-201ENST00000266880 PCDHGA6Q9Y5G7 932 aa10.75□□□□□ -0.69
CHFR-201ENST00000266880 PTCH2Q9Y6C5 1203 aa10.75□□□□□ -0.69
CHFR-201ENST00000266880 MANBAO00462 879 aa10.75□□□□□ -0.69
CHFR-201ENST00000266880 TACR2P21452 398 aa10.75□□□□□ -0.69
CHFR-201ENST00000266880 CAV2P51636 162 aa10.75□□□□□ -0.69
CHFR-201ENST00000266880 DCLRE1AQ6PJP8 1040 aa10.75□□□□□ -0.69
CHFR-201ENST00000266880 ZNF681Q96N22 645 aa10.75□□□□□ -0.69
CHFR-201ENST00000266880 OR51J1Q9H342 316 aa10.75□□□□□ -0.69
CHFR-201ENST00000266880 NIT2Q9NQR4 276 aa10.75□□□□□ -0.69
CHFR-201ENST00000266880 CCL16O15467 120 aa10.75□□□□□ -0.69
CHFR-201ENST00000266880 CLDN11O75508 207 aa10.75□□□□□ -0.69
CHFR-201ENST00000266880 ZNF821O75541 412 aaPredicted RBP10.75□□□□□ -0.69
CHFR-201ENST00000266880 MT-ND2P03891 347 aa10.75□□□□□ -0.69
CHFR-201ENST00000266880 ADRB3P13945 408 aa10.75□□□□□ -0.69
CHFR-201ENST00000266880 ART1P52961 327 aa10.75□□□□□ -0.69
CHFR-201ENST00000266880 DPY19L1Q2PZI1 675 aa10.75□□□□□ -0.69
CHFR-201ENST00000266880 TXNL4BQ9NX01 149 aaKnown RBP10.75□□□□□ -0.69
CHFR-201ENST00000266880 ERI3O43414 337 aaKnown RBP10.75□□□□□ -0.69
CHFR-201ENST00000266880 PTTG1O95997 202 aa10.75□□□□□ -0.69
CHFR-201ENST00000266880 EPHX1P07099 455 aa10.75□□□□□ -0.69
CHFR-201ENST00000266880 RABL3Q5HYI8 236 aa10.75□□□□□ -0.69
CHFR-201ENST00000266880 NUDT13Q86X67 352 aa10.75□□□□□ -0.69
CHFR-201ENST00000266880 ZNF808Q8N4W9 903 aaPredicted RBP10.75□□□□□ -0.69
CHFR-201ENST00000266880 RCBTB1Q8NDN9 531 aa10.75□□□□□ -0.69
CHFR-201ENST00000266880 OR4K17Q8NGC6 315 aa10.75□□□□□ -0.69
CHFR-201ENST00000266880 ADIPOR1Q96A54 375 aa10.75□□□□□ -0.69
CHFR-201ENST00000266880 CNN2Q99439 309 aaKnown RBP10.75□□□□□ -0.69
CHFR-201ENST00000266880 SLC38A3Q99624 504 aa10.75□□□□□ -0.69
CHFR-201ENST00000266880 PDCD1LG2Q9BQ51 273 aa10.75□□□□□ -0.69
CHFR-201ENST00000266880 PAPOLGQ9BWT3 736 aaKnown RBP10.75□□□□□ -0.69
CHFR-201ENST00000266880 POTEKPQ9BYX7 375 aa10.75□□□□□ -0.69
CHFR-201ENST00000266880 ZNF436Q9C0F3 470 aaPredicted RBP10.75□□□□□ -0.69
CHFR-201ENST00000266880 TGFB1P01137 390 aa10.75□□□□□ -0.69
CHFR-201ENST00000266880 PEA15Q15121 130 aa10.75□□□□□ -0.69
CHFR-201ENST00000266880 CDCA2Q69YH5 1023 aaPredicted RBP10.75□□□□□ -0.69
CHFR-201ENST00000266880 DESI1Q6ICB0 168 aa10.75□□□□□ -0.69
CHFR-201ENST00000266880 NOXRED1Q6NXP6 359 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms