RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 TBCEQ15813 527 aaPredicted RBP11.05□□□□□ -0.64
CLSTN3-201ENST00000266546 ZNF630Q2M218 657 aaPredicted RBP11.05□□□□□ -0.64
CLSTN3-201ENST00000266546 INAVAQ3KP66 663 aa11.05□□□□□ -0.64
CLSTN3-201ENST00000266546 Q6ZNB5 142 aa11.05□□□□□ -0.64
CLSTN3-201ENST00000266546 ZNF548Q8NEK5 533 aaPredicted RBP11.05□□□□□ -0.64
CLSTN3-201ENST00000266546 OR4K1Q8NGD4 311 aa11.05□□□□□ -0.64
CLSTN3-201ENST00000266546 CCM2Q9BSQ5 444 aa11.05□□□□□ -0.64
CLSTN3-201ENST00000266546 NLKQ9UBE8 527 aa11.05□□□□□ -0.64
CLSTN3-201ENST00000266546 OARD1Q9Y530 152 aa11.05□□□□□ -0.64
CLSTN3-201ENST00000266546 A0A0U1RQS6 177 aa11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 GSAPA4D1B5 854 aa11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 ANKRD34BA5PLL1 514 aa11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 K7ERQ8 282 aa11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 NPC1O15118 1278 aa11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 MID1O15344 667 aa11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 PRMT3O60678 531 aa11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 S100A9P06702 114 aaKnown RBP11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 EPHX1P07099 455 aa11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 SBK3P0C264 359 aa11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 FOSL2P15408 326 aa11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 CPN2P22792 545 aa11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 PRKCDQ05655 676 aa11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 ATP13A5Q4VNC0 1218 aa11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 ATAD3CQ5T2N8 411 aa11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 KIAA1161Q6NSJ0 714 aa11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 ADGRD2Q7Z7M1 963 aa11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 LACC1Q8IV20 430 aa11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 CRIPAKQ8N1N5 446 aa11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 C12orf76Q8N812 135 aaPredicted RBP11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 FAM83FQ8NEG4 500 aaPredicted RBP11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 SNAPC3Q92966 411 aa11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 AP2M1Q96CW1 435 aa11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 TCEAL4Q96EI5 215 aa11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 TSSK6Q9BXA6 273 aa11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 DPAGT1Q9H3H5 408 aa11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 RNF121Q9H920 327 aa11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 PDFQ9HBH1 243 aa11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 LHX3Q9UBR4 397 aa11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 FAM86C2PA6NEL3 165 aa11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 HMX3A6NHT5 357 aa11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 ATG13O75143 517 aa11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 CBSLP0DN79 551 aa11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 CBSP35520 551 aa11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 MNX1P50219 401 aaPredicted RBP11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 PNLIPRP1P54315 467 aa11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 PPP3R1P63098 170 aa11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 RPL6Q02878 288 aaKnown RBP11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 PCBP2Q15366 365 aaKnown RBP eCLIP11.04□□□□□ -0.648e-8■■■■□ 24
CLSTN3-201ENST00000266546 SPIN4Q56A73 249 aa11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 ARSIQ5FYB1 569 aa11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 SYT6Q5T7P8 510 aaPredicted RBP11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 CPZQ66K79 652 aa11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 ALG1LQ6GMV1 187 aa11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 PHYKPLQ8IUZ5 450 aa11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 SLC30A8Q8IWU4 369 aa11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 ZNF366Q8N895 744 aa11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 ZNF514Q96K75 400 aaPredicted RBP11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 TEX37Q96LM6 180 aa11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 WRAP53Q9BUR4 548 aaKnown RBP11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 COMMD9Q9P000 198 aa11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 HS3ST2Q9Y278 367 aa11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 UGT2A1Q9Y4X1 527 aa11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 PCDHB11Q9Y5F2 797 aa11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 SPO11Q9Y5K1 396 aa11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 MROH6A6NGR9 719 aa11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 FXYD1O00168 92 aa11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 JRKO75564 520 aa11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 CEBPBP17676 345 aa11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 EIF2DP41214 584 aaKnown RBP11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 CRISP1P54107 249 aa11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 KCNC4Q03721 635 aa11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 UGT8Q16880 541 aa11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 ITPRIPL2Q3MIP1 535 aa11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 ZNF805Q5CZA5 627 aa11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 LIN54Q6MZP7 749 aa11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 MFSD6LQ8IWD5 586 aa11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 TOMM5Q8N4H5 51 aa11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 CELF2-AS1Q8N7Q2 184 aa11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 VN1R2Q8NFZ6 395 aa11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 ASB15Q8WXK1 588 aa11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 KAT2AQ92830 837 aa11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 GTPBP2Q9BX10 602 aaKnown RBP11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 TNFRSF12AQ9NP84 129 aa11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 FARSBQ9NSD9 589 aaKnown RBP11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 PCDH10Q9P2E7 1040 aa11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 STUB1Q9UNE7 303 aa11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 MYO10Q9HD67 2058 aa11.04□□□□□ -0.64
CLSTN3-201ENST00000266546 A0A1W2PQL4 384 aaPredicted RBP11.03□□□□□ -0.64
CLSTN3-201ENST00000266546 TGFB1P01137 390 aa11.03□□□□□ -0.64
CLSTN3-201ENST00000266546 CDK1P06493 297 aa11.03□□□□□ -0.64
CLSTN3-201ENST00000266546 TNFSF8P32971 234 aa11.03□□□□□ -0.64
CLSTN3-201ENST00000266546 SSR2P43308 183 aa11.03□□□□□ -0.64
CLSTN3-201ENST00000266546 CDKN1CP49918 316 aaPredicted RBP11.03□□□□□ -0.64
CLSTN3-201ENST00000266546 RGS8P57771 180 aaPredicted RBP11.03□□□□□ -0.64
CLSTN3-201ENST00000266546 RPA4Q13156 261 aa11.03□□□□□ -0.64
CLSTN3-201ENST00000266546 CLEC12AQ5QGZ9 265 aa11.03□□□□□ -0.64
CLSTN3-201ENST00000266546 MBOAT1Q6ZNC8 495 aa11.03□□□□□ -0.64
CLSTN3-201ENST00000266546 C17orf64Q86WR6 236 aa11.03□□□□□ -0.64
CLSTN3-201ENST00000266546 PGBD5Q8N414 524 aa11.03□□□□□ -0.64
CLSTN3-201ENST00000266546 KLHL36Q8N4N3 616 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms