RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 TSFMP43897 325 aaKnown RBP17.25■□□□□ 0.35
SDF4-201ENST00000263741 RPL14P50914 215 aaKnown RBP17.25■□□□□ 0.35
SDF4-201ENST00000263741 ID2Q02363 134 aa17.25■□□□□ 0.35
SDF4-201ENST00000263741 EEF1A2Q05639 463 aaKnown RBP17.25■□□□□ 0.35
SDF4-201ENST00000263741 CHAF1BQ13112 559 aa17.25■□□□□ 0.35
SDF4-201ENST00000263741 MRM1Q6IN84 353 aaKnown RBP17.25■□□□□ 0.35
SDF4-201ENST00000263741 RGS9BPQ6ZS82 235 aa17.25■□□□□ 0.35
SDF4-201ENST00000263741 TRIM42Q8IWZ5 723 aa17.25■□□□□ 0.35
SDF4-201ENST00000263741 RAB3IL1Q8TBN0 382 aa17.25■□□□□ 0.35
SDF4-201ENST00000263741 RAB3IPQ96QF0 476 aaPredicted RBP17.25■□□□□ 0.35
SDF4-201ENST00000263741 LYRM4Q9HD34 91 aa17.25■□□□□ 0.35
SDF4-201ENST00000263741 THAP1Q9NVV9 213 aa17.25■□□□□ 0.35
SDF4-201ENST00000263741 NMRK1Q9NWW6 199 aa17.25■□□□□ 0.35
SDF4-201ENST00000263741 AHSPQ9NZD4 102 aa17.25■□□□□ 0.35
SDF4-201ENST00000263741 MCM8Q9UJA3 840 aa17.25■□□□□ 0.35
SDF4-201ENST00000263741 ASB4Q9Y574 426 aa17.25■□□□□ 0.35
SDF4-201ENST00000263741 A0A1W2PR48 441 aa17.24■□□□□ 0.35
SDF4-201ENST00000263741 MAPK12P53778 367 aa17.24■□□□□ 0.35
SDF4-201ENST00000263741 TNFRSF17Q02223 184 aa17.24■□□□□ 0.35
SDF4-201ENST00000263741 ZNF33BQ06732 778 aa17.24■□□□□ 0.35
SDF4-201ENST00000263741 DEFB109BQ30KR1 87 aa17.24■□□□□ 0.35
SDF4-201ENST00000263741 CPZQ66K79 652 aa17.24■□□□□ 0.35
SDF4-201ENST00000263741 GPR180Q86V85 440 aa17.24■□□□□ 0.35
SDF4-201ENST00000263741 CDC26Q8NHZ8 85 aa17.24■□□□□ 0.35
SDF4-201ENST00000263741 SERTM1A2A2V5 107 aa17.24■□□□□ 0.35
SDF4-201ENST00000263741 SLC28A1O00337 649 aa17.24■□□□□ 0.35
SDF4-201ENST00000263741 SOCS6O14544 535 aa17.24■□□□□ 0.35
SDF4-201ENST00000263741 LDB3O75112 727 aa17.24■□□□□ 0.35
SDF4-201ENST00000263741 RSL1D1O76021 490 aaKnown RBP17.24■□□□□ 0.35
SDF4-201ENST00000263741 AIFM1O95831 613 aa17.24■□□□□ 0.35
SDF4-201ENST00000263741 CD63P08962 238 aa17.24■□□□□ 0.35
SDF4-201ENST00000263741 JAK1P23458 1154 aa17.24■□□□□ 0.35
SDF4-201ENST00000263741 MMP11P24347 488 aa17.24■□□□□ 0.35
SDF4-201ENST00000263741 RPL38P63173 70 aaKnown RBP17.24■□□□□ 0.35
SDF4-201ENST00000263741 SSPNQ14714 243 aa17.24■□□□□ 0.35
SDF4-201ENST00000263741 SPIN4Q56A73 249 aa17.24■□□□□ 0.35
SDF4-201ENST00000263741 XKR7Q5GH72 579 aa17.24■□□□□ 0.35
SDF4-201ENST00000263741 FAM47EQ6ZV65 393 aa17.24■□□□□ 0.35
SDF4-201ENST00000263741 PAGE2Q7Z2X7 111 aa17.24■□□□□ 0.35
SDF4-201ENST00000263741 TNRC6AQ8NDV7 1962 aaKnown RBP17.24■□□□□ 0.35
SDF4-201ENST00000263741 C19orf60Q96EN9 201 aa17.24■□□□□ 0.35
SDF4-201ENST00000263741 NUF2Q9BZD4 464 aa17.24■□□□□ 0.35
SDF4-201ENST00000263741 PIEZO2Q9H5I5 2752 aa17.24■□□□□ 0.35
SDF4-201ENST00000263741 NECTIN3Q9NQS3 549 aa17.24■□□□□ 0.35
SDF4-201ENST00000263741 SEMA3GQ9NS98 782 aa17.24■□□□□ 0.35
SDF4-201ENST00000263741 HAO1Q9UJM8 370 aa17.24■□□□□ 0.35
SDF4-201ENST00000263741 GNG14A0A1W2PPG7 69 aa17.23■□□□□ 0.35
SDF4-201ENST00000263741 LSM1O15116 133 aaKnown RBP17.23■□□□□ 0.35
SDF4-201ENST00000263741 RGS14O43566 566 aa17.23■□□□□ 0.35
SDF4-201ENST00000263741 SEC22BO75396 215 aa17.23■□□□□ 0.35
SDF4-201ENST00000263741 DCTN3O75935 186 aa17.23■□□□□ 0.35
SDF4-201ENST00000263741 C8orf89P0DMQ9 161 aa17.23■□□□□ 0.35
SDF4-201ENST00000263741 PPP2R1BP30154 601 aa17.23■□□□□ 0.35
SDF4-201ENST00000263741 TIA1P31483 386 aaKnown RBP eCLIP17.23■□□□□ 0.355e-7■■□□□ 14
SDF4-201ENST00000263741 ARFIP1P53367 373 aa17.23■□□□□ 0.35
SDF4-201ENST00000263741 SLC13A2Q13183 592 aa17.23■□□□□ 0.35
SDF4-201ENST00000263741 KIRREL2Q6UWL6 708 aa17.23■□□□□ 0.35
SDF4-201ENST00000263741 RAB43Q86YS6 212 aa17.23■□□□□ 0.35
SDF4-201ENST00000263741 OR4N5Q8IXE1 308 aa17.23■□□□□ 0.35
SDF4-201ENST00000263741 C11orf24Q96F05 449 aaPredicted RBP17.23■□□□□ 0.35
SDF4-201ENST00000263741 PTCHD1Q96NR3 888 aa17.23■□□□□ 0.35
SDF4-201ENST00000263741 CLK4Q9HAZ1 481 aaKnown RBP17.23■□□□□ 0.35
SDF4-201ENST00000263741 LRTM1Q9HBL6 345 aa17.23■□□□□ 0.35
SDF4-201ENST00000263741 PRTFDC1Q9NRG1 225 aa17.23■□□□□ 0.35
SDF4-201ENST00000263741 LYARQ9NX58 379 aaKnown RBP17.23■□□□□ 0.35
SDF4-201ENST00000263741 P4HTMQ9NXG6 502 aa17.23■□□□□ 0.35
SDF4-201ENST00000263741 C5AR2Q9P296 337 aa17.23■□□□□ 0.35
SDF4-201ENST00000263741 DLGAP4Q9Y2H0 992 aa17.23■□□□□ 0.35
SDF4-201ENST00000263741 ARGFXA6NJG6 315 aa17.22■□□□□ 0.35
SDF4-201ENST00000263741 KLF11O14901 512 aa17.22■□□□□ 0.35
SDF4-201ENST00000263741 PRMT3O60678 531 aa17.22■□□□□ 0.35
SDF4-201ENST00000263741 PEX11AO75192 247 aa17.22■□□□□ 0.35
SDF4-201ENST00000263741 NR2F6P10588 404 aa17.22■□□□□ 0.35
SDF4-201ENST00000263741 MC1RQ01726 317 aa17.22■□□□□ 0.35
SDF4-201ENST00000263741 NSDHLQ15738 373 aa17.22■□□□□ 0.35
SDF4-201ENST00000263741 PHF11Q9UIL8 331 aa17.22■□□□□ 0.35
SDF4-201ENST00000263741 FBXL4Q9UKA2 621 aa17.22■□□□□ 0.35
SDF4-201ENST00000263741 ADAM29Q9UKF5 820 aa17.22■□□□□ 0.35
SDF4-201ENST00000263741 MAN2B2Q9Y2E5 1009 aa17.22■□□□□ 0.35
SDF4-201ENST00000263741 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.22■□□□□ 0.35
SDF4-201ENST00000263741 CLDN16Q9Y5I7 305 aa17.22■□□□□ 0.35
SDF4-201ENST00000263741 USH1CQ9Y6N9 552 aa17.22■□□□□ 0.35
SDF4-201ENST00000263741 SPACA6W5XKT8 324 aa17.22■□□□□ 0.35
SDF4-201ENST00000263741 PROM1O43490 865 aa17.22■□□□□ 0.35
SDF4-201ENST00000263741 RFTN2Q52LD8 501 aaPredicted RBP17.22■□□□□ 0.35
SDF4-201ENST00000263741 VWA5B1Q5TIE3 1220 aa17.22■□□□□ 0.35
SDF4-201ENST00000263741 RNF165Q6ZSG1 346 aa17.22■□□□□ 0.35
SDF4-201ENST00000263741 OR11G2Q8NGC1 345 aa17.22■□□□□ 0.35
SDF4-201ENST00000263741 C1orf50Q9BV19 199 aa17.22■□□□□ 0.35
SDF4-201ENST00000263741 FAM117AQ9C073 453 aa17.22■□□□□ 0.35
SDF4-201ENST00000263741 PRORYQ9H606 182 aa17.22■□□□□ 0.35
SDF4-201ENST00000263741 C1orf109Q9NX04 203 aa17.22■□□□□ 0.35
SDF4-201ENST00000263741 ZFYVE26Q68DK2 2539 aa17.22■□□□□ 0.35
SDF4-201ENST00000263741 BOD1L1Q8NFC6 3051 aa17.22■□□□□ 0.35
SDF4-201ENST00000263741 A0A1W2PS29 197 aa17.21■□□□□ 0.35
SDF4-201ENST00000263741 FGF17O60258 216 aa17.21■□□□□ 0.35
SDF4-201ENST00000263741 DNAJB5O75953 348 aa17.21■□□□□ 0.35
SDF4-201ENST00000263741 ANXA4P09525 319 aaPredicted RBP17.21■□□□□ 0.35
SDF4-201ENST00000263741 ACPPP15309 386 aa17.21■□□□□ 0.35
SDF4-201ENST00000263741 IL10P22301 178 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms