RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 A0A1W2PPW3 197 aa17.93■□□□□ 0.46
SMARCC1-201ENST00000254480 PFKMP08237 780 aa17.93■□□□□ 0.46
SMARCC1-201ENST00000254480 PCSK2P16519 638 aa17.93■□□□□ 0.46
SMARCC1-201ENST00000254480 FBLP22087 321 aaKnown RBP17.93■□□□□ 0.46
SMARCC1-201ENST00000254480 GADD45AP24522 165 aa17.93■□□□□ 0.46
SMARCC1-201ENST00000254480 MAGEA12P43365 314 aa17.93■□□□□ 0.46
SMARCC1-201ENST00000254480 DNAJB13P59910 316 aa17.93■□□□□ 0.46
SMARCC1-201ENST00000254480 ADAM15Q13444 863 aa17.93■□□□□ 0.46
SMARCC1-201ENST00000254480 CLECL1Q8IZS7 167 aa17.93■□□□□ 0.46
SMARCC1-201ENST00000254480 ZNF565Q8N9K5 539 aa17.93■□□□□ 0.46
SMARCC1-201ENST00000254480 C14orf105Q9NVL8 296 aa17.93■□□□□ 0.46
SMARCC1-201ENST00000254480 SLC36A3Q495N2 470 aa17.93■□□□□ 0.46
SMARCC1-201ENST00000254480 CATSPEREQ5SY80 951 aa17.93■□□□□ 0.46
SMARCC1-201ENST00000254480 PYHIN1Q6K0P9 492 aa17.93■□□□□ 0.46
SMARCC1-201ENST00000254480 TRIM73Q86UV7 250 aa17.93■□□□□ 0.46
SMARCC1-201ENST00000254480 BOLLQ8N9W6 283 aaKnown RBP17.93■□□□□ 0.46
SMARCC1-201ENST00000254480 ZNF700Q9H0M5 742 aa17.93■□□□□ 0.46
SMARCC1-201ENST00000254480 MED11Q9P086 117 aa17.93■□□□□ 0.46
SMARCC1-201ENST00000254480 NFS1Q9Y697 457 aa17.93■□□□□ 0.46
SMARCC1-201ENST00000254480 SDK1Q7Z5N4 2213 aa17.93■□□□□ 0.46
SMARCC1-201ENST00000254480 KANTRA0A1W2PQU2 76 aa17.93■□□□□ 0.46
SMARCC1-201ENST00000254480 SEC14L5O43304 696 aa17.93■□□□□ 0.46
SMARCC1-201ENST00000254480 PFKLP17858 780 aa17.93■□□□□ 0.46
SMARCC1-201ENST00000254480 PAMR1Q6UXH9 720 aa17.93■□□□□ 0.46
SMARCC1-201ENST00000254480 OSTF1Q92882 214 aa17.93■□□□□ 0.46
SMARCC1-201ENST00000254480 MAL2Q969L2 176 aa17.93■□□□□ 0.46
SMARCC1-201ENST00000254480 SFXN1Q9H9B4 322 aa17.93■□□□□ 0.46
SMARCC1-201ENST00000254480 CXXC1Q9P0U4 656 aaPredicted RBP17.93■□□□□ 0.46
SMARCC1-201ENST00000254480 ST14Q9Y5Y6 855 aa17.93■□□□□ 0.46
SMARCC1-201ENST00000254480 HTRA2O43464 458 aaPredicted RBP17.92■□□□□ 0.46
SMARCC1-201ENST00000254480 HLA-DPB1P04440 258 aa17.92■□□□□ 0.46
SMARCC1-201ENST00000254480 ITIH1P19827 911 aa17.92■□□□□ 0.46
SMARCC1-201ENST00000254480 GPR4P46093 362 aa17.92■□□□□ 0.46
SMARCC1-201ENST00000254480 CD97P48960 835 aa17.92■□□□□ 0.46
SMARCC1-201ENST00000254480 PLCXD2Q0VAA5 305 aa17.92■□□□□ 0.46
SMARCC1-201ENST00000254480 LIPJQ5W064 366 aa17.92■□□□□ 0.46
SMARCC1-201ENST00000254480 CES4AQ5XG92 561 aa17.92■□□□□ 0.46
SMARCC1-201ENST00000254480 SLC37A3Q8NCC5 494 aa17.92■□□□□ 0.46
SMARCC1-201ENST00000254480 FAM83CQ9BQN1 747 aa17.92■□□□□ 0.46
SMARCC1-201ENST00000254480 FBXO9Q9UK97 447 aaPredicted RBP17.92■□□□□ 0.46
SMARCC1-201ENST00000254480 PTGESO14684 152 aa17.92■□□□□ 0.46
SMARCC1-201ENST00000254480 ZNF865P0CJ78 1059 aaPredicted RBP17.92■□□□□ 0.46
SMARCC1-201ENST00000254480 ARSFP54793 590 aa17.92■□□□□ 0.46
SMARCC1-201ENST00000254480 GNG2P59768 71 aa17.92■□□□□ 0.46
SMARCC1-201ENST00000254480 LRRTM3Q86VH5 581 aa17.92■□□□□ 0.46
SMARCC1-201ENST00000254480 CSNK1A1LQ8N752 337 aa17.92■□□□□ 0.46
SMARCC1-201ENST00000254480 HUS1BQ8NHY5 278 aa17.92■□□□□ 0.46
SMARCC1-201ENST00000254480 HTR3EA5X5Y0 456 aa17.92■□□□□ 0.46
SMARCC1-201ENST00000254480 BPIP17213 487 aa17.92■□□□□ 0.46
SMARCC1-201ENST00000254480 TIA1P31483 386 aaKnown RBP eCLIP17.92■□□□□ 0.463e-11■■■■□ 24.6
SMARCC1-201ENST00000254480 ACVR1BP36896 505 aa17.92■□□□□ 0.46
SMARCC1-201ENST00000254480 NANSQ9NR45 359 aa17.92■□□□□ 0.46
SMARCC1-201ENST00000254480 FOXD2O60548 495 aaPredicted RBP17.92■□□□□ 0.46
SMARCC1-201ENST00000254480 ZDHHC14Q8IZN3 488 aa17.92■□□□□ 0.46
SMARCC1-201ENST00000254480 BORCS8Q96FH0 119 aa17.92■□□□□ 0.46
SMARCC1-201ENST00000254480 MKLN1Q9UL63 735 aa17.92■□□□□ 0.46
SMARCC1-201ENST00000254480 NPIPA2E9PIF3 369 aa17.92■□□□□ 0.46
SMARCC1-201ENST00000254480 NPIPA3F8WFD2 350 aa17.92■□□□□ 0.46
SMARCC1-201ENST00000254480 OR2B3O76000 313 aa17.92■□□□□ 0.46
SMARCC1-201ENST00000254480 SLC15A1P46059 708 aa17.92■□□□□ 0.46
SMARCC1-201ENST00000254480 KCNC1P48547 511 aa17.92■□□□□ 0.46
SMARCC1-201ENST00000254480 SRYQ05066 204 aa17.92■□□□□ 0.46
SMARCC1-201ENST00000254480 ST3GAL4Q11206 333 aa17.92■□□□□ 0.46
SMARCC1-201ENST00000254480 SLC39A5Q6ZMH5 540 aa17.92■□□□□ 0.46
SMARCC1-201ENST00000254480 SMARCD2Q92925 531 aa17.92■□□□□ 0.46
SMARCC1-201ENST00000254480 ZFR2Q9UPR6 939 aaKnown RBP17.92■□□□□ 0.46
SMARCC1-201ENST00000254480 CMAHPQ9Y471 501 aa17.92■□□□□ 0.46
SMARCC1-201ENST00000254480 EPOP01588 193 aa17.91■□□□□ 0.46
SMARCC1-201ENST00000254480 ADORA3P0DMS8 318 aa17.91■□□□□ 0.46
SMARCC1-201ENST00000254480 SRCP12931 536 aa17.91■□□□□ 0.46
SMARCC1-201ENST00000254480 KCNAB2Q13303 367 aa17.91■□□□□ 0.46
SMARCC1-201ENST00000254480 PDSS1Q5T2R2 415 aa17.91■□□□□ 0.46
SMARCC1-201ENST00000254480 RAET1LQ5VY80 246 aa17.91■□□□□ 0.46
SMARCC1-201ENST00000254480 UMODL1-AS1Q8N2C9 162 aa17.91■□□□□ 0.46
SMARCC1-201ENST00000254480 GATAD2BQ8WXI9 593 aa17.91■□□□□ 0.46
SMARCC1-201ENST00000254480 PNPLA2Q96AD5 504 aa17.91■□□□□ 0.46
SMARCC1-201ENST00000254480 ERVK-18Q9QC07 812 aa17.91■□□□□ 0.46
SMARCC1-201ENST00000254480 ARL6IP5O75915 188 aa17.91■□□□□ 0.46
SMARCC1-201ENST00000254480 CPNE6O95741 557 aa17.91■□□□□ 0.46
SMARCC1-201ENST00000254480 ATF4P18848 351 aaPredicted RBP17.91■□□□□ 0.46
SMARCC1-201ENST00000254480 DEFB126Q9BYW3 111 aa17.91■□□□□ 0.46
SMARCC1-201ENST00000254480 ENAMQ9NRM1 1142 aa17.91■□□□□ 0.46
SMARCC1-201ENST00000254480 METTL21EPA6NDL7 271 aa17.91■□□□□ 0.46
SMARCC1-201ENST00000254480 PTGER1P34995 402 aa17.91■□□□□ 0.46
SMARCC1-201ENST00000254480 CST6Q15828 149 aa17.91■□□□□ 0.46
SMARCC1-201ENST00000254480 RDH12Q96NR8 316 aa17.91■□□□□ 0.46
SMARCC1-201ENST00000254480 CCDC106Q9BWC9 280 aa17.91■□□□□ 0.46
SMARCC1-201ENST00000254480 SH2B3Q9UQQ2 575 aa17.91■□□□□ 0.46
SMARCC1-201ENST00000254480 ZNF182P17025 639 aaPredicted RBP17.91■□□□□ 0.46
SMARCC1-201ENST00000254480 ZNF33AQ06730 810 aa17.91■□□□□ 0.46
SMARCC1-201ENST00000254480 CCDC107Q8WV48 283 aa17.91■□□□□ 0.46
SMARCC1-201ENST00000254480 MON2Q7Z3U7 1717 aa17.91■□□□□ 0.46
SMARCC1-201ENST00000254480 NALCNQ8IZF0 1738 aa17.91■□□□□ 0.46
SMARCC1-201ENST00000254480 MT-ND5P03915 603 aa17.91■□□□□ 0.46
SMARCC1-201ENST00000254480 ZNF12P17014 697 aa17.91■□□□□ 0.46
SMARCC1-201ENST00000254480 CRYZQ08257 329 aaKnown RBP17.91■□□□□ 0.46
SMARCC1-201ENST00000254480 SYNPOQ8N3V7 929 aa17.91■□□□□ 0.46
SMARCC1-201ENST00000254480 DPAGT1Q9H3H5 408 aa17.91■□□□□ 0.46
SMARCC1-201ENST00000254480 STOX2Q9P2F5 926 aaPredicted RBP17.91■□□□□ 0.46
SMARCC1-201ENST00000254480 CD8B2A6NJW9 211 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms