RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 MFSD1Q9H3U5 465 aa14.03□□□□□ -0.16
PTPRA-201ENST00000216877 PLCXD1Q9NUJ7 323 aa14.03□□□□□ -0.16
PTPRA-201ENST00000216877 SNX11Q9Y5W9 270 aa14.03□□□□□ -0.16
PTPRA-201ENST00000216877 FXYD6-FXYD2A0A087WZ82 144 aa14.02□□□□□ -0.16
PTPRA-201ENST00000216877 HYKKA2RU49 373 aa14.02□□□□□ -0.16
PTPRA-201ENST00000216877 FAM25EA8MYX2 175 aa14.02□□□□□ -0.16
PTPRA-201ENST00000216877 MATN3O15232 486 aa14.02□□□□□ -0.16
PTPRA-201ENST00000216877 ARPC5O15511 151 aa14.02□□□□□ -0.16
PTPRA-201ENST00000216877 SULT1B1O43704 296 aa14.02□□□□□ -0.16
PTPRA-201ENST00000216877 GJB3O75712 270 aa14.02□□□□□ -0.16
PTPRA-201ENST00000216877 LALBAP00709 142 aa14.02□□□□□ -0.16
PTPRA-201ENST00000216877 EGFP01133 1207 aa14.02□□□□□ -0.16
PTPRA-201ENST00000216877 RLN2P04090 185 aa14.02□□□□□ -0.16
PTPRA-201ENST00000216877 HOXA1P49639 335 aaPredicted RBP14.02□□□□□ -0.16
PTPRA-201ENST00000216877 ZNF157P51786 506 aaPredicted RBP14.02□□□□□ -0.16
PTPRA-201ENST00000216877 AKR1C2P52895 323 aa14.02□□□□□ -0.16
PTPRA-201ENST00000216877 AKR1C1Q04828 323 aa14.02□□□□□ -0.16
PTPRA-201ENST00000216877 ARHGEF7Q14155 803 aa14.02□□□□□ -0.16
PTPRA-201ENST00000216877 PDSS1Q5T2R2 415 aa14.02□□□□□ -0.16
PTPRA-201ENST00000216877 SLC6A19Q695T7 634 aa14.02□□□□□ -0.16
PTPRA-201ENST00000216877 MZT2AQ6P582 158 aa14.02□□□□□ -0.16
PTPRA-201ENST00000216877 FAM198BQ6UWH4 519 aa14.02□□□□□ -0.16
PTPRA-201ENST00000216877 DUSP18Q8NEJ0 188 aa14.02□□□□□ -0.16
PTPRA-201ENST00000216877 RHEBL1Q8TAI7 183 aa14.02□□□□□ -0.16
PTPRA-201ENST00000216877 WDFY2Q96P53 400 aa14.02□□□□□ -0.16
PTPRA-201ENST00000216877 CPPED1Q9BRF8 314 aaPredicted RBP14.02□□□□□ -0.16
PTPRA-201ENST00000216877 THAP7Q9BT49 309 aaPredicted RBP14.02□□□□□ -0.16
PTPRA-201ENST00000216877 FXYD6Q9H0Q3 95 aa14.02□□□□□ -0.16
PTPRA-201ENST00000216877 TAS2R3Q9NYW6 316 aa14.02□□□□□ -0.16
PTPRA-201ENST00000216877 OR6C75A6NL08 312 aa14.02□□□□□ -0.17
PTPRA-201ENST00000216877 SEPT4O43236 478 aa14.02□□□□□ -0.17
PTPRA-201ENST00000216877 TLX2O43763 284 aaPredicted RBP14.02□□□□□ -0.17
PTPRA-201ENST00000216877 WDPCPO95876 746 aa14.02□□□□□ -0.17
PTPRA-201ENST00000216877 OTCP00480 354 aa14.02□□□□□ -0.17
PTPRA-201ENST00000216877 CHMP24386 653 aa14.02□□□□□ -0.17
PTPRA-201ENST00000216877 SLC10A7Q0GE19 358 aa14.02□□□□□ -0.17
PTPRA-201ENST00000216877 KCNA10Q16322 511 aa14.02□□□□□ -0.17
PTPRA-201ENST00000216877 PAN2Q504Q3 1202 aaKnown RBP14.02□□□□□ -0.17
PTPRA-201ENST00000216877 PYHIN1Q6K0P9 492 aa14.02□□□□□ -0.17
PTPRA-201ENST00000216877 TSSK6Q9BXA6 273 aa14.02□□□□□ -0.17
PTPRA-201ENST00000216877 PRMT8Q9NR22 394 aaPredicted RBP14.02□□□□□ -0.17
PTPRA-201ENST00000216877 LYARQ9NX58 379 aaKnown RBP14.02□□□□□ -0.17
PTPRA-201ENST00000216877 CACNG4Q9UBN1 327 aa14.02□□□□□ -0.17
PTPRA-201ENST00000216877 UBQLN1Q9UMX0 589 aaKnown RBP14.02□□□□□ -0.17
PTPRA-201ENST00000216877 PCDHGB7Q9Y5F8 929 aa14.02□□□□□ -0.17
PTPRA-201ENST00000216877 CACNG2Q9Y698 323 aa14.02□□□□□ -0.17
PTPRA-201ENST00000216877 WDR81Q562E7 1941 aa14.02□□□□□ -0.17
PTPRA-201ENST00000216877 TANC1Q9C0D5 1861 aa14.02□□□□□ -0.17
PTPRA-201ENST00000216877 OR6C74A6NCV1 312 aa14.02□□□□□ -0.17
PTPRA-201ENST00000216877 CD8B2A6NJW9 211 aa14.02□□□□□ -0.17
PTPRA-201ENST00000216877 TLR4O00206 839 aa14.02□□□□□ -0.17
PTPRA-201ENST00000216877 SPDEFO95238 335 aa14.02□□□□□ -0.17
PTPRA-201ENST00000216877 CD8BP10966 210 aa14.02□□□□□ -0.17
PTPRA-201ENST00000216877 SMPD1P17405 629 aa14.02□□□□□ -0.17
PTPRA-201ENST00000216877 TACR1P25103 407 aa14.02□□□□□ -0.17
PTPRA-201ENST00000216877 KIR3DL1P43629 444 aa14.02□□□□□ -0.17
PTPRA-201ENST00000216877 MC2RQ01718 297 aa14.02□□□□□ -0.17
PTPRA-201ENST00000216877 TCTE1Q5JU00 501 aa14.02□□□□□ -0.17
PTPRA-201ENST00000216877 SIRPB2Q5JXA9 342 aa14.02□□□□□ -0.17
PTPRA-201ENST00000216877 SFRP4Q6FHJ7 346 aaPredicted RBP14.02□□□□□ -0.17
PTPRA-201ENST00000216877 CCDC36Q8IYA8 594 aa14.02□□□□□ -0.17
PTPRA-201ENST00000216877 DPYSL5Q9BPU6 564 aa14.02□□□□□ -0.17
PTPRA-201ENST00000216877 CMSS1Q9BQ75 279 aaKnown RBP14.02□□□□□ -0.17
PTPRA-201ENST00000216877 NIFKQ9BYG3 293 aaKnown RBP14.02□□□□□ -0.17
PTPRA-201ENST00000216877 RRAGCQ9HB90 399 aa14.02□□□□□ -0.17
PTPRA-201ENST00000216877 MRTO4Q9UKD2 239 aaKnown RBP14.02□□□□□ -0.17
PTPRA-201ENST00000216877 DLGAP4Q9Y2H0 992 aa14.02□□□□□ -0.17
PTPRA-201ENST00000216877 LANCL1O43813 399 aa14.01□□□□□ -0.17
PTPRA-201ENST00000216877 HBQ1P09105 142 aa14.01□□□□□ -0.17
PTPRA-201ENST00000216877 KCNJ3P48549 501 aa14.01□□□□□ -0.17
PTPRA-201ENST00000216877 RBBP4Q09028 425 aa14.01□□□□□ -0.17
PTPRA-201ENST00000216877 MAD2L1Q13257 205 aaPredicted RBP14.01□□□□□ -0.17
PTPRA-201ENST00000216877 SLC39A12Q504Y0 691 aa14.01□□□□□ -0.17
PTPRA-201ENST00000216877 CLECL1Q8IZS7 167 aa14.01□□□□□ -0.17
PTPRA-201ENST00000216877 GPC2Q8N158 579 aa14.01□□□□□ -0.17
PTPRA-201ENST00000216877 OXR1Q8N573 874 aa14.01□□□□□ -0.17
PTPRA-201ENST00000216877 RELL2Q8NC24 303 aaPredicted RBP14.01□□□□□ -0.17
PTPRA-201ENST00000216877 PCYT2Q99447 389 aa14.01□□□□□ -0.17
PTPRA-201ENST00000216877 DPH7Q9BTV6 452 aa14.01□□□□□ -0.17
PTPRA-201ENST00000216877 SPATC1LQ9H0A9 340 aa14.01□□□□□ -0.17
PTPRA-201ENST00000216877 OR51B5Q9H339 312 aa14.01□□□□□ -0.17
PTPRA-201ENST00000216877 AGO3Q9H9G7 860 aaKnown RBP14.01□□□□□ -0.17
PTPRA-201ENST00000216877 EMC7Q9NPA0 242 aa14.01□□□□□ -0.17
PTPRA-201ENST00000216877 PRDM9Q9NQV7 894 aa14.01□□□□□ -0.17
PTPRA-201ENST00000216877 OTOFQ9HC10 1997 aa14.01□□□□□ -0.17
PTPRA-201ENST00000216877 DISC1C4P0D8 188 aa14.01□□□□□ -0.17
PTPRA-201ENST00000216877 WNT9AO14904 365 aa14.01□□□□□ -0.17
PTPRA-201ENST00000216877 B4GALT3O60512 393 aa14.01□□□□□ -0.17
PTPRA-201ENST00000216877 IL1AP01583 271 aa14.01□□□□□ -0.17
PTPRA-201ENST00000216877 EPOP01588 193 aa14.01□□□□□ -0.17
PTPRA-201ENST00000216877 HLA-EP13747 358 aa14.01□□□□□ -0.17
PTPRA-201ENST00000216877 COX7A2P14406 83 aa14.01□□□□□ -0.17
PTPRA-201ENST00000216877 GJA1P17302 382 aa14.01□□□□□ -0.17
PTPRA-201ENST00000216877 INSL4Q14641 139 aa14.01□□□□□ -0.17
PTPRA-201ENST00000216877 TAF1CQ15572 869 aaPredicted RBP14.01□□□□□ -0.17
PTPRA-201ENST00000216877 LTB4RQ15722 352 aa14.01□□□□□ -0.17
PTPRA-201ENST00000216877 FBXO47Q5MNV8 452 aa14.01□□□□□ -0.17
PTPRA-201ENST00000216877 IQCF1Q8N6M8 205 aa14.01□□□□□ -0.17
PTPRA-201ENST00000216877 YIPF5Q969M3 257 aa14.01□□□□□ -0.17
PTPRA-201ENST00000216877 TADA1Q96BN2 335 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms