RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 RHOP08100 348 aa14.37□□□□□ -0.11
EFNB1-201ENST00000204961 CBSLP0DN79 551 aa14.37□□□□□ -0.11
EFNB1-201ENST00000204961 NR2F1P10589 423 aa14.37□□□□□ -0.11
EFNB1-201ENST00000204961 CYP2A6P11509 494 aaPredicted RBP14.37□□□□□ -0.11
EFNB1-201ENST00000204961 CBSP35520 551 aa14.37□□□□□ -0.11
EFNB1-201ENST00000204961 ATP6V1E1P36543 226 aa14.37□□□□□ -0.11
EFNB1-201ENST00000204961 PPP5CP53041 499 aa14.37□□□□□ -0.11
EFNB1-201ENST00000204961 SLC16A1P53985 500 aa14.37□□□□□ -0.11
EFNB1-201ENST00000204961 TAP2Q03519 686 aa14.37□□□□□ -0.11
EFNB1-201ENST00000204961 LIPJQ5W064 366 aa14.37□□□□□ -0.11
EFNB1-201ENST00000204961 HTR3DQ70Z44 454 aa14.37□□□□□ -0.11
EFNB1-201ENST00000204961 LHFPL3Q86UP9 236 aa14.37□□□□□ -0.11
EFNB1-201ENST00000204961 LRRC3BQ96PB8 259 aa14.37□□□□□ -0.11
EFNB1-201ENST00000204961 FCRL4Q96PJ5 515 aa14.37□□□□□ -0.11
EFNB1-201ENST00000204961 TTYH2Q9BSA4 534 aa14.37□□□□□ -0.11
EFNB1-201ENST00000204961 ACER3Q9NUN7 267 aa14.37□□□□□ -0.11
EFNB1-201ENST00000204961 TAS2R9Q9NYW1 312 aa14.37□□□□□ -0.11
EFNB1-201ENST00000204961 SLC23A2Q9UGH3 650 aa14.37□□□□□ -0.11
EFNB1-201ENST00000204961 PLEKHM1Q9Y4G2 1056 aa14.37□□□□□ -0.11
EFNB1-201ENST00000204961 ANHXE9PGG2 379 aa14.37□□□□□ -0.11
EFNB1-201ENST00000204961 IRS1P35568 1242 aa14.37□□□□□ -0.11
EFNB1-201ENST00000204961 CLDN2P57739 230 aa14.37□□□□□ -0.11
EFNB1-201ENST00000204961 KEAP1Q14145 624 aa14.37□□□□□ -0.11
EFNB1-201ENST00000204961 MICAQ29983 383 aa14.37□□□□□ -0.11
EFNB1-201ENST00000204961 PLEKHS1Q5SXH7 462 aa14.37□□□□□ -0.11
EFNB1-201ENST00000204961 ARMC4Q5T2S8 1044 aa14.37□□□□□ -0.11
EFNB1-201ENST00000204961 C22orf42Q6IC83 251 aa14.37□□□□□ -0.11
EFNB1-201ENST00000204961 NRARPQ7Z6K4 114 aa14.37□□□□□ -0.11
EFNB1-201ENST00000204961 LAX1Q8IWV1 398 aa14.37□□□□□ -0.11
EFNB1-201ENST00000204961 CBARPQ8N350 705 aaPredicted RBP14.37□□□□□ -0.11
EFNB1-201ENST00000204961 OVCA2Q8WZ82 227 aa14.37□□□□□ -0.11
EFNB1-201ENST00000204961 VOPP1Q96AW1 172 aa14.37□□□□□ -0.11
EFNB1-201ENST00000204961 TRMT61AQ96FX7 289 aaKnown RBP14.37□□□□□ -0.11
EFNB1-201ENST00000204961 TM9SF2Q99805 663 aa14.37□□□□□ -0.11
EFNB1-201ENST00000204961 NECTIN3Q9NQS3 549 aa14.37□□□□□ -0.11
EFNB1-201ENST00000204961 B3GNT3Q9Y2A9 372 aa14.37□□□□□ -0.11
EFNB1-201ENST00000204961 ANAPC1Q9H1A4 1944 aa14.37□□□□□ -0.11
EFNB1-201ENST00000204961 HEATR5BQ9P2D3 2071 aa14.37□□□□□ -0.11
EFNB1-201ENST00000204961 GRXCR2A6NFK2 248 aa14.36□□□□□ -0.11
EFNB1-201ENST00000204961 TAF4O00268 1085 aa14.36□□□□□ -0.11
EFNB1-201ENST00000204961 MED26O95402 600 aa14.36□□□□□ -0.11
EFNB1-201ENST00000204961 C1orf105O95561 183 aa14.36□□□□□ -0.11
EFNB1-201ENST00000204961 CDK1P06493 297 aa14.36□□□□□ -0.11
EFNB1-201ENST00000204961 DSTNP60981 165 aa14.36□□□□□ -0.11
EFNB1-201ENST00000204961 RACK1P63244 317 aaKnown RBP14.36□□□□□ -0.11
EFNB1-201ENST00000204961 KCNC4Q03721 635 aa14.36□□□□□ -0.11
EFNB1-201ENST00000204961 LASP1Q14847 261 aaKnown RBP14.36□□□□□ -0.11
EFNB1-201ENST00000204961 TRIM40Q6P9F5 258 aa14.36□□□□□ -0.11
EFNB1-201ENST00000204961 CASP12Q6UXS9 341 aa14.36□□□□□ -0.11
EFNB1-201ENST00000204961 OR8J2Q8NGG1 315 aa14.36□□□□□ -0.11
EFNB1-201ENST00000204961 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.36□□□□□ -0.11
EFNB1-201ENST00000204961 LGR4Q9BXB1 951 aa14.36□□□□□ -0.11
EFNB1-201ENST00000204961 ASPNQ9BXN1 380 aa14.36□□□□□ -0.11
EFNB1-201ENST00000204961 POLR2J3Q9H1A7 115 aaKnown RBP14.36□□□□□ -0.11
EFNB1-201ENST00000204961 SPATA6Q9NWH7 488 aaPredicted RBP14.36□□□□□ -0.11
EFNB1-201ENST00000204961 AGAP5A6NIR3 686 aa14.36□□□□□ -0.11
EFNB1-201ENST00000204961 PDZK1P1A8MUH7 402 aa14.36□□□□□ -0.11
EFNB1-201ENST00000204961 GPX5O75715 221 aa14.36□□□□□ -0.11
EFNB1-201ENST00000204961 NCR1O76036 304 aa14.36□□□□□ -0.11
EFNB1-201ENST00000204961 CDRT1O95170 752 aa14.36□□□□□ -0.11
EFNB1-201ENST00000204961 DDX5P17844 614 aaKnown RBP14.36□□□□□ -0.11
EFNB1-201ENST00000204961 S100A1P23297 94 aa14.36□□□□□ -0.11
EFNB1-201ENST00000204961 EIF2DP41214 584 aaKnown RBP14.36□□□□□ -0.11
EFNB1-201ENST00000204961 ID2Q02363 134 aa14.36□□□□□ -0.11
EFNB1-201ENST00000204961 PUM1Q14671 1186 aaKnown RBP eCLIP14.36□□□□□ -0.11
EFNB1-201ENST00000204961 IQCCQ4KMZ1 466 aa14.36□□□□□ -0.11
EFNB1-201ENST00000204961 AGAP7PQ5VUJ5 663 aa14.36□□□□□ -0.11
EFNB1-201ENST00000204961 CCDC116Q8IYX3 515 aa14.36□□□□□ -0.11
EFNB1-201ENST00000204961 SHISA5Q8N114 240 aa14.36□□□□□ -0.11
EFNB1-201ENST00000204961 SMAP2Q8WU79 429 aaPredicted RBP14.36□□□□□ -0.11
EFNB1-201ENST00000204961 SLC38A5Q8WUX1 472 aa14.36□□□□□ -0.11
EFNB1-201ENST00000204961 GATAD2BQ8WXI9 593 aa14.36□□□□□ -0.11
EFNB1-201ENST00000204961 BTBD2Q9BX70 525 aa14.36□□□□□ -0.11
EFNB1-201ENST00000204961 CCDC177Q9NQR7 707 aaPredicted RBP14.36□□□□□ -0.11
EFNB1-201ENST00000204961 ANKMY1Q9P2S6 941 aa14.36□□□□□ -0.11
EFNB1-201ENST00000204961 COMMD3Q9UBI1 195 aa14.36□□□□□ -0.11
EFNB1-201ENST00000204961 KLHL3Q9UH77 587 aa14.36□□□□□ -0.11
EFNB1-201ENST00000204961 MUTYHQ9UIF7 546 aa14.36□□□□□ -0.11
EFNB1-201ENST00000204961 HS3ST2Q9Y278 367 aa14.36□□□□□ -0.11
EFNB1-201ENST00000204961 TBC1D3BA6NDS4 549 aa14.36□□□□□ -0.11
EFNB1-201ENST00000204961 OR52A4PA6NMU1 304 aa14.36□□□□□ -0.11
EFNB1-201ENST00000204961 PLD2O14939 933 aa14.36□□□□□ -0.11
EFNB1-201ENST00000204961 UPK1BO75841 260 aa14.36□□□□□ -0.11
EFNB1-201ENST00000204961 ACP5P13686 325 aa14.36□□□□□ -0.11
EFNB1-201ENST00000204961 RPS19P39019 145 aaKnown RBP14.36□□□□□ -0.11
EFNB1-201ENST00000204961 PPM1FP49593 454 aaPredicted RBP14.36□□□□□ -0.11
EFNB1-201ENST00000204961 CLCNKAP51800 687 aa14.36□□□□□ -0.11
EFNB1-201ENST00000204961 MTAPQ13126 283 aa14.36□□□□□ -0.11
EFNB1-201ENST00000204961 ANXA8L1Q5VT79 327 aa14.36□□□□□ -0.11
EFNB1-201ENST00000204961 GRHL2Q6ISB3 625 aa14.36□□□□□ -0.11
EFNB1-201ENST00000204961 ERAP2Q6P179 960 aa14.36□□□□□ -0.11
EFNB1-201ENST00000204961 ZNF783Q6ZMS7 281 aa14.36□□□□□ -0.11
EFNB1-201ENST00000204961 GDPD3Q7L5L3 318 aa14.36□□□□□ -0.11
EFNB1-201ENST00000204961 SLC5A11Q8WWX8 675 aa14.36□□□□□ -0.11
EFNB1-201ENST00000204961 RHBGQ9H310 441 aa14.36□□□□□ -0.11
EFNB1-201ENST00000204961 TBC1D17Q9HA65 648 aa14.36□□□□□ -0.11
EFNB1-201ENST00000204961 FZD3Q9NPG1 666 aa14.36□□□□□ -0.11
EFNB1-201ENST00000204961 CNIH4Q9P003 139 aa14.36□□□□□ -0.11
EFNB1-201ENST00000204961 ZNF282Q9UDV7 671 aaPredicted RBP14.36□□□□□ -0.11
EFNB1-201ENST00000204961 COL4A6Q14031 1691 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms