RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Ccdc185Q3V118 621 aa9.38□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Rftn1Q6A0D4 554 aa9.38□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Ugt2a2Q6PDD0 528 aa9.38□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Gramd2bQ6PEM6 445 aa9.38□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Tmem202Q80W35 275 aa9.38□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Fbxl14Q8BID8 400 aa9.38□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 LsampQ8BLK3 341 aa9.38□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Sumf2Q8BPG6 308 aa9.38□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Mblac1Q8BWY4 260 aa9.38□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Fate1Q8CEK7 99 aa9.38□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Stx19Q8R1Q0 292 aa9.38□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 SdslQ8R238 329 aa9.38□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Olfr315Q8VFG7 309 aa9.38□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 NrarpQ91ZA8 114 aa9.38□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Use1Q9CQ56 270 aa9.38□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 NepnQ9CQ76 512 aa9.38□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Serpini2Q9JK88 405 aa9.38□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Slc7a9Q9QXA6 487 aa9.38□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Acss2Q9QXG4 701 aa9.38□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Olfr71Q9QZ18 312 aa9.38□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Ubqln2Q9QZM0 638 aa9.38□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Olfr49Q9Z1V0 313 aa9.38□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Rhox2dW4VSN9 191 aa9.38□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Gm16432A0A0A6YXX9 775 aa9.38□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Hpse2B2RY83 592 aa9.38□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Zfp808B8JJZ4 753 aa9.38□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Olfr592E9PYB3 312 aa9.38□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Olfr631F8VPJ9 319 aa9.38□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Fcho2Q3UQN2 809 aa9.38□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Pan3Q640Q5 837 aa9.38□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Lrrtm3Q8BZ81 582 aa9.38□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Dppa4Q8CCG4 296 aa9.38□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 FkrpQ8CG64 494 aa9.38□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 McatQ8R3F5 381 aaKnown RBP9.38□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Olfr1461Q8VEV7 312 aa9.38□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Olfr811Q8VFI1 319 aa9.38□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Zfp84Q9D654 559 aa9.38□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Glipr1l1Q9DAG6 236 aa9.38□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Amdhd1Q9DBA8 426 aa9.38□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Isoc2bQ9DCC7 210 aa9.38□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 ProdhQ9WU79 599 aa9.38□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Olfr1040A2ARY1 313 aa9.37□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Pgbd5D3YZI9 523 aa9.37□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 AU018091E9PWS4 684 aa9.37□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Olfr549E9Q542 316 aa9.37□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Itga10E9Q6R1 1167 aa9.37□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 1700014D04RikJ3QMS2 983 aa9.37□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Vmn1r16K7N775 303 aa9.37□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Foxd2O35392 492 aa9.37□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Clcn7O70496 803 aa9.37□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 GzmeP08884 248 aa9.37□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Cdh3P10287 822 aa9.37□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Hoxd8P23463 289 aa9.37□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Htr7P32304 448 aa9.37□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Alox12P39655 663 aa9.37□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 PtnP63089 168 aa9.37□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Gsk3aQ2NL51 490 aa9.37□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Rapgefl1Q68EF8 662 aa9.37□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Szrd1Q6NXN1 152 aa9.37□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Dennd5aQ6PAL8 1287 aa9.37□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Olfr594Q7TRR4 311 aa9.37□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Trim50Q810I2 483 aa9.37□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Lrrtm2Q8BGA3 515 aa9.37□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Enpp6Q8BGN3 440 aa9.37□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 PxkQ8BX57 582 aa9.37□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Bbs4Q8C1Z7 520 aa9.37□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Pcyox1lQ8C7K6 495 aa9.37□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Cops8Q8VBV7 209 aa9.37□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Cts7Q91ZF2 331 aa9.37□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Wdr73Q9CWR1 371 aa9.37□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Aloxe3Q9WV07 711 aa9.37□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 HnrnpfQ9Z2X1 415 aaKnown RBP9.37□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Gm14459A2BI73 179 aa9.37□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Esp31A8R0W3 114 aa9.37□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Klhl3E0CZ16 587 aa9.37□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 P01631 113 aa9.37□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Tk1P04184 233 aa9.37□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Nat3P50296 290 aa9.37□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Tbpl1P62340 186 aa9.37□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Ntsr2P70310 416 aa9.37□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Cab39Q06138 341 aa9.37□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 StimateQ3UF25 288 aa9.37□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Elmod1Q3V1U8 326 aa9.37□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 C1orf109Q499E6 217 aa9.37□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Sez6l2Q4V9Z5 910 aa9.37□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Cep44Q5HZK1 386 aa9.37□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Ldoc1Q7TPY9 151 aa9.37□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Zik1Q80YP6 463 aa9.37□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Them6Q80ZW2 207 aa9.37□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Shc2Q8BMC3 573 aa9.37□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 CptpQ8BS40 216 aa9.37□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Tmem72Q8C3K5 275 aa9.37□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Pdlim5Q8CI51 591 aaKnown RBP9.37□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Irak4Q8R4K2 459 aa9.37□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 NclnQ8VCM8 563 aaKnown RBP9.37□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Olfr666Q8VH00 318 aa9.37□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Cd209aQ91ZX1 238 aa9.37□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Slc25a46Q9CQS4 418 aa9.37□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Ropn1lQ9EQ00 218 aa9.37□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 GraspQ9JJA9 392 aa9.37□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 24.1 ms