RNA–Protein interactions for RNA: ENST00000636012.1

CACNA1A-221, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-221ENST00000636012 ANXA8P13928 327 aa15.4■□□□□ 0.06
CACNA1A-221ENST00000636012 DUSP3P51452 185 aaPredicted RBP15.4■□□□□ 0.06
CACNA1A-221ENST00000636012 C1orf61Q13536 156 aa15.4■□□□□ 0.06
CACNA1A-221ENST00000636012 MPP7Q5T2T1 576 aa15.4■□□□□ 0.06
CACNA1A-221ENST00000636012 NCBP2-AS2Q69YL0 99 aa15.4■□□□□ 0.06
CACNA1A-221ENST00000636012 ERI1Q8IV48 349 aaKnown RBP15.4■□□□□ 0.06
CACNA1A-221ENST00000636012 NSMAFQ92636 917 aa15.4■□□□□ 0.06
CACNA1A-221ENST00000636012 RBP7Q96R05 134 aa15.4■□□□□ 0.06
CACNA1A-221ENST00000636012 OR51I1Q9H343 314 aa15.4■□□□□ 0.06
CACNA1A-221ENST00000636012 SRRDQ9UH36 339 aa15.4■□□□□ 0.06
CACNA1A-221ENST00000636012 FAM155AB1AL88 458 aaPredicted RBP15.4■□□□□ 0.06
CACNA1A-221ENST00000636012 SCO1O75880 301 aa15.4■□□□□ 0.06
CACNA1A-221ENST00000636012 ACTL6BO94805 426 aa15.4■□□□□ 0.06
CACNA1A-221ENST00000636012 SEC23BQ15437 767 aa15.4■□□□□ 0.06
CACNA1A-221ENST00000636012 LRIT3Q3SXY7 679 aa15.4■□□□□ 0.06
CACNA1A-221ENST00000636012 LRIF1Q5T3J3 769 aa15.4■□□□□ 0.06
CACNA1A-221ENST00000636012 PRR11Q96HE9 360 aaPredicted RBP15.4■□□□□ 0.06
CACNA1A-221ENST00000636012 EBF4Q9BQW3 602 aa15.4■□□□□ 0.06
CACNA1A-221ENST00000636012 CXXC1Q9P0U4 656 aaPredicted RBP15.4■□□□□ 0.06
CACNA1A-221ENST00000636012 B4GALT7Q9UBV7 327 aa15.4■□□□□ 0.06
CACNA1A-221ENST00000636012 LMO7Q8WWI1 1683 aa15.4■□□□□ 0.06
CACNA1A-221ENST00000636012 FEZF1A0PJY2 475 aa15.39■□□□□ 0.06
CACNA1A-221ENST00000636012 CASC3O15234 703 aaKnown RBP15.39■□□□□ 0.06
CACNA1A-221ENST00000636012 RPS17P08708 135 aaKnown RBP15.39■□□□□ 0.06
CACNA1A-221ENST00000636012 JUNDP17535 347 aa15.39■□□□□ 0.06
CACNA1A-221ENST00000636012 GSTM3P21266 225 aa15.39■□□□□ 0.06
CACNA1A-221ENST00000636012 OGDHQ02218 1023 aa15.39■□□□□ 0.06
CACNA1A-221ENST00000636012 ARHGAP1Q07960 439 aa15.39■□□□□ 0.06
CACNA1A-221ENST00000636012 MLC1Q15049 377 aa15.39■□□□□ 0.06
CACNA1A-221ENST00000636012 GPRC6AQ5T6X5 926 aa15.39■□□□□ 0.06
CACNA1A-221ENST00000636012 MFSD5Q6N075 450 aa15.39■□□□□ 0.06
CACNA1A-221ENST00000636012 TPRG1Q6ZUI0 275 aa15.39■□□□□ 0.06
CACNA1A-221ENST00000636012 HMGN2P46Q86SG4 172 aa15.39■□□□□ 0.06
CACNA1A-221ENST00000636012 C7orf34Q96L11 122 aa15.39■□□□□ 0.06
CACNA1A-221ENST00000636012 WACQ9BTA9 647 aa15.39■□□□□ 0.06
CACNA1A-221ENST00000636012 POLDIP3Q9BY77 421 aaKnown RBP15.39■□□□□ 0.06
CACNA1A-221ENST00000636012 NELFAQ9H3P2 528 aa15.39■□□□□ 0.06
CACNA1A-221ENST00000636012 RGCCQ9H4X1 137 aa15.39■□□□□ 0.06
CACNA1A-221ENST00000636012 PTPRCAPQ14761 206 aa15.39■□□□□ 0.05
CACNA1A-221ENST00000636012 TMEM35AQ53FP2 167 aa15.39■□□□□ 0.05
CACNA1A-221ENST00000636012 SYCE2Q6PIF2 218 aa15.39■□□□□ 0.05
CACNA1A-221ENST00000636012 RPS27LQ71UM5 84 aaKnown RBP15.39■□□□□ 0.05
CACNA1A-221ENST00000636012 GALNT6Q8NCL4 622 aa15.39■□□□□ 0.05
CACNA1A-221ENST00000636012 PPP4R1LQ9P1A2 415 aa15.39■□□□□ 0.05
CACNA1A-221ENST00000636012 NUFIP1Q9UHK0 495 aaKnown RBP15.39■□□□□ 0.05
CACNA1A-221ENST00000636012 H2BFMP0C1H6 154 aa15.39■□□□□ 0.05
CACNA1A-221ENST00000636012 RPS15P62841 145 aaKnown RBP15.39■□□□□ 0.05
CACNA1A-221ENST00000636012 LPAL2Q16609 132 aa15.39■□□□□ 0.05
CACNA1A-221ENST00000636012 C22orf39Q6P5X5 142 aa15.39■□□□□ 0.05
CACNA1A-221ENST00000636012 CLCA1A8K7I4 914 aa15.39■□□□□ 0.05
CACNA1A-221ENST00000636012 DCUN1D3Q8IWE4 304 aa15.39■□□□□ 0.05
CACNA1A-221ENST00000636012 PCDHB16Q9NRJ7 776 aa15.39■□□□□ 0.05
CACNA1A-221ENST00000636012 DNAJC27Q9NZQ0 273 aa15.39■□□□□ 0.05
CACNA1A-221ENST00000636012 POMPQ9Y244 141 aa15.39■□□□□ 0.05
CACNA1A-221ENST00000636012 A0A1W2PPK0 400 aa15.39■□□□□ 0.05
CACNA1A-221ENST00000636012 AOC1P19801 751 aa15.39■□□□□ 0.05
CACNA1A-221ENST00000636012 SLC11A1P49279 550 aa15.39■□□□□ 0.05
CACNA1A-221ENST00000636012 USP53Q70EK8 1073 aa15.39■□□□□ 0.05
CACNA1A-221ENST00000636012 RCBTB1Q8NDN9 531 aa15.39■□□□□ 0.05
CACNA1A-221ENST00000636012 ZNF516Q92618 1163 aa15.39■□□□□ 0.05
CACNA1A-221ENST00000636012 LCHNA4D1U4 455 aa15.39■□□□□ 0.05
CACNA1A-221ENST00000636012 A6NL46 340 aa15.39■□□□□ 0.05
CACNA1A-221ENST00000636012 OR2T5Q6IEZ7 315 aa15.39■□□□□ 0.05
CACNA1A-221ENST00000636012 ELMOD2Q8IZ81 293 aa15.39■□□□□ 0.05
CACNA1A-221ENST00000636012 OR4K1Q8NGD4 311 aa15.39■□□□□ 0.05
CACNA1A-221ENST00000636012 OR2T29Q8NH02 315 aa15.39■□□□□ 0.05
CACNA1A-221ENST00000636012 TMEM234Q8WY98 164 aa15.39■□□□□ 0.05
CACNA1A-221ENST00000636012 ICKQ9UPZ9 632 aa15.39■□□□□ 0.05
CACNA1A-221ENST00000636012 PCDHGA8Q9Y5G5 932 aa15.39■□□□□ 0.05
CACNA1A-221ENST00000636012 ASCC3Q8N3C0 2202 aaKnown RBP15.39■□□□□ 0.05
CACNA1A-221ENST00000636012 DUX1O43812 170 aa15.38■□□□□ 0.05
CACNA1A-221ENST00000636012 OR12D1P0DN82 309 aa15.38■□□□□ 0.05
CACNA1A-221ENST00000636012 LIX1LQ8IVB5 337 aa15.38■□□□□ 0.05
CACNA1A-221ENST00000636012 DOK4Q8TEW6 326 aa15.38■□□□□ 0.05
CACNA1A-221ENST00000636012 UBXN10Q96LJ8 280 aa15.38■□□□□ 0.05
CACNA1A-221ENST00000636012 HERPUD2Q9BSE4 406 aa15.38■□□□□ 0.05
CACNA1A-221ENST00000636012 SYPP08247 313 aa15.38■□□□□ 0.05
CACNA1A-221ENST00000636012 PCSK2P16519 638 aa15.38■□□□□ 0.05
CACNA1A-221ENST00000636012 GBX1Q14549 363 aa15.38■□□□□ 0.05
CACNA1A-221ENST00000636012 HAGHLQ6PII5 290 aaPredicted RBP15.38■□□□□ 0.05
CACNA1A-221ENST00000636012 HACD2Q6Y1H2 254 aa15.38■□□□□ 0.05
CACNA1A-221ENST00000636012 GNPDA2Q8TDQ7 276 aa15.38■□□□□ 0.05
CACNA1A-221ENST00000636012 TRIB2Q92519 343 aa15.38■□□□□ 0.05
CACNA1A-221ENST00000636012 ACSL5Q9ULC5 683 aa15.38■□□□□ 0.05
CACNA1A-221ENST00000636012 TRAV6A0A075B6T7 132 aa15.38■□□□□ 0.05
CACNA1A-221ENST00000636012 HNRNPH3P31942 346 aaKnown RBP15.38■□□□□ 0.05
CACNA1A-221ENST00000636012 TSSK6Q9BXA6 273 aa15.38■□□□□ 0.05
CACNA1A-221ENST00000636012 SERTAD4Q9NUC0 356 aa15.38■□□□□ 0.05
CACNA1A-221ENST00000636012 A8MV72 311 aaPredicted RBP15.38■□□□□ 0.05
CACNA1A-221ENST00000636012 PRKD3O94806 890 aa15.38■□□□□ 0.05
CACNA1A-221ENST00000636012 POU6F2P78424 691 aaPredicted RBP15.38■□□□□ 0.05
CACNA1A-221ENST00000636012 C12orf45Q8N5I9 185 aaPredicted RBP15.38■□□□□ 0.05
CACNA1A-221ENST00000636012 KCNA7Q96RP8 456 aa15.38■□□□□ 0.05
CACNA1A-221ENST00000636012 RBPJLQ9UBG7 517 aa15.38■□□□□ 0.05
CACNA1A-221ENST00000636012 IL20RAQ9UHF4 553 aa15.38■□□□□ 0.05
CACNA1A-221ENST00000636012 TMED5Q9Y3A6 229 aa15.38■□□□□ 0.05
CACNA1A-221ENST00000636012 PCDHGA2Q9Y5H1 932 aa15.38■□□□□ 0.05
CACNA1A-221ENST00000636012 CAPN5O15484 640 aaPredicted RBP15.38■□□□□ 0.05
CACNA1A-221ENST00000636012 POLR2HP52434 150 aaKnown RBP15.38■□□□□ 0.05
CACNA1A-221ENST00000636012 MERTKQ12866 999 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms